Protein–RNA interactions for Protein: P09027

Hoxd3, Homeobox protein Hox-D3, mousemouse

Predictions only

Length 433 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxd3P09027 Csta1-201ENSMUST00000096090 2783 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
Hoxd3P09027 Cldn12-202ENSMUST00000115445 3477 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
Hoxd3P09027 Mdm4-202ENSMUST00000067429 3490 ntAPPRIS P3 TSL 1 (best) BASIC5.12□□□□□ -1.59
Hoxd3P09027 Tpx2-207ENSMUST00000178997 4161 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
Hoxd3P09027 Gm29194-201ENSMUST00000189250 2167 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
Hoxd3P09027 Dlg1-206ENSMUST00000115205 4364 ntAPPRIS ALT2 TSL 1 (best) BASIC5.12□□□□□ -1.59
Hoxd3P09027 Itih4-201ENSMUST00000006703 2980 ntAPPRIS ALT2 TSL 1 (best) BASIC5.12□□□□□ -1.59
Hoxd3P09027 Itih4-202ENSMUST00000078490 2993 ntAPPRIS ALT2 TSL 1 (best) BASIC5.12□□□□□ -1.59
Hoxd3P09027 Celf2-226ENSMUST00000183209 3852 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
Hoxd3P09027 Nsrp1-201ENSMUST00000102494 3114 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
Hoxd3P09027 Vezt-204ENSMUST00000119818 11138 ntAPPRIS ALT2 TSL 1 (best) BASIC5.12□□□□□ -1.59
Hoxd3P09027 Pigc-202ENSMUST00000111594 3290 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
Hoxd3P09027 Fam205a4-201ENSMUST00000108026 4130 ntAPPRIS P1 TSL 5 BASIC5.12□□□□□ -1.59
Hoxd3P09027 Lamp3-201ENSMUST00000081880 3343 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
Hoxd3P09027 Spin4-201ENSMUST00000096367 4173 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
Hoxd3P09027 Adam3-209ENSMUST00000171438 2501 ntAPPRIS P1 TSL 2 BASIC5.12□□□□□ -1.59
Hoxd3P09027 Olfr1386-202ENSMUST00000204518 2553 ntAPPRIS P1 TSL 3 BASIC5.11□□□□□ -1.59
Hoxd3P09027 Chd9-201ENSMUST00000048665 12008 ntAPPRIS P3 TSL 1 (best) BASIC5.11□□□□□ -1.59
Hoxd3P09027 Olfr957-202ENSMUST00000216177 1726 ntAPPRIS P1 TSL 3 BASIC5.11□□□□□ -1.59
Hoxd3P09027 Rapgef6-204ENSMUST00000108894 3475 ntTSL 5 BASIC5.11□□□□□ -1.59
Hoxd3P09027 Ccdc175-201ENSMUST00000021494 2622 ntAPPRIS P1 TSL 5 BASIC5.11□□□□□ -1.59
Hoxd3P09027 Tdrkh-207ENSMUST00000197901 2652 ntAPPRIS P2 TSL 5 BASIC5.11□□□□□ -1.59
Hoxd3P09027 Zp3r-203ENSMUST00000142416 1835 ntTSL 5 BASIC5.11□□□□□ -1.59
Hoxd3P09027 D330045A20Rik-202ENSMUST00000113030 3736 ntAPPRIS P3 TSL 1 (best) BASIC5.11□□□□□ -1.59
Hoxd3P09027 Cbll1-203ENSMUST00000101499 3900 ntAPPRIS P2 TSL 1 (best) BASIC5.11□□□□□ -1.59
Hoxd3P09027 Gm21698-202ENSMUST00000191203 2995 ntAPPRIS P1 TSL 5 BASIC5.11□□□□□ -1.59
Hoxd3P09027 Gm15930-201ENSMUST00000156603 2037 ntBASIC5.11□□□□□ -1.59
Hoxd3P09027 Stc1-201ENSMUST00000014957 4197 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
Hoxd3P09027 Bbx-205ENSMUST00000114488 3293 ntAPPRIS P3 TSL 1 (best) BASIC5.11□□□□□ -1.59
Hoxd3P09027 Gm4211-201ENSMUST00000181103 2220 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
Hoxd3P09027 Dgkk-201ENSMUST00000067410 7155 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
Hoxd3P09027 Zfp110-205ENSMUST00000168247 2499 ntAPPRIS P1 TSL 5 BASIC5.11□□□□□ -1.59
Hoxd3P09027 Gm25915-201ENSMUST00000104265 126 ntBASIC5.11□□□□□ -1.59
Hoxd3P09027 Gm26376-201ENSMUST00000104784 110 ntBASIC5.11□□□□□ -1.59
Hoxd3P09027 Gm15750-201ENSMUST00000120970 616 ntBASIC5.11□□□□□ -1.59
Hoxd3P09027 Gm14038-201ENSMUST00000121500 807 ntBASIC5.11□□□□□ -1.59
Hoxd3P09027 Gm12101-201ENSMUST00000121590 390 ntBASIC5.11□□□□□ -1.59
Hoxd3P09027 Gm13725-201ENSMUST00000122139 207 ntBASIC5.11□□□□□ -1.59
Hoxd3P09027 Gm12119-201ENSMUST00000136083 700 ntTSL 3 BASIC5.11□□□□□ -1.59
Hoxd3P09027 Gm23829-201ENSMUST00000157392 270 ntBASIC5.11□□□□□ -1.59
Hoxd3P09027 Gm25660-201ENSMUST00000158470 104 ntBASIC5.11□□□□□ -1.59
Hoxd3P09027 Gm24577-201ENSMUST00000158580 63 ntBASIC5.11□□□□□ -1.59
Hoxd3P09027 Ear-ps4-201ENSMUST00000166834 450 ntBASIC5.11□□□□□ -1.59
Hoxd3P09027 Gm17162-201ENSMUST00000168538 473 ntBASIC5.11□□□□□ -1.59
Hoxd3P09027 Dynlt1a-201ENSMUST00000169415 742 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
Hoxd3P09027 Gm26381-201ENSMUST00000174895 92 ntBASIC5.11□□□□□ -1.59
Hoxd3P09027 Gm26400-201ENSMUST00000175012 85 ntBASIC5.11□□□□□ -1.59
Hoxd3P09027 Gm6061-201ENSMUST00000175860 492 ntBASIC5.11□□□□□ -1.59
Hoxd3P09027 Gm23945-201ENSMUST00000179609 92 ntBASIC5.11□□□□□ -1.59
Hoxd3P09027 Mir6921-201ENSMUST00000183719 80 ntBASIC5.11□□□□□ -1.59
Hoxd3P09027 Mir6989-201ENSMUST00000184812 65 ntBASIC5.11□□□□□ -1.59
Hoxd3P09027 Gm18447-201ENSMUST00000187501 307 ntBASIC5.11□□□□□ -1.59
Hoxd3P09027 Gm28985-201ENSMUST00000189261 356 ntTSL 5 BASIC5.11□□□□□ -1.59
Hoxd3P09027 Gm28777-201ENSMUST00000191402 535 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
Hoxd3P09027 Gm37065-201ENSMUST00000191636 444 ntTSL 2 BASIC5.11□□□□□ -1.59
Hoxd3P09027 Gm37338-201ENSMUST00000191986 127 ntBASIC5.11□□□□□ -1.59
Hoxd3P09027 Gm37381-201ENSMUST00000192427 899 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
Hoxd3P09027 Gm44730-201ENSMUST00000205902 716 ntTSL 3 BASIC5.11□□□□□ -1.59
Hoxd3P09027 Usf2-ps1-201ENSMUST00000206657 311 ntBASIC5.11□□□□□ -1.59
Hoxd3P09027 Gm7706-201ENSMUST00000209946 388 ntTSL 3 BASIC5.11□□□□□ -1.59
Hoxd3P09027 Gm31931-201ENSMUST00000219666 222 ntBASIC5.11□□□□□ -1.59
Hoxd3P09027 AC133598.3-201ENSMUST00000224322 568 ntBASIC5.11□□□□□ -1.59
Hoxd3P09027 AC154305.1-201ENSMUST00000224443 450 ntBASIC5.11□□□□□ -1.59
Hoxd3P09027 CT010453.2-201ENSMUST00000227005 483 ntBASIC5.11□□□□□ -1.59
Hoxd3P09027 Olfr699-201ENSMUST00000065024 951 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
Hoxd3P09027 Mir138-1-201ENSMUST00000083480 99 ntBASIC5.11□□□□□ -1.59
Hoxd3P09027 AC155922.2-201ENSMUST00000220240 1458 ntTSL 5 BASIC5.11□□□□□ -1.59
Hoxd3P09027 Vmn1r210-202ENSMUST00000226180 3116 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
Hoxd3P09027 Olfr1391-202ENSMUST00000215671 3235 ntAPPRIS P1 TSL 5 BASIC5.11□□□□□ -1.59
Hoxd3P09027 Lrrc31-201ENSMUST00000108263 3284 ntAPPRIS P1 TSL 2 BASIC5.11□□□□□ -1.59
Hoxd3P09027 Atm-201ENSMUST00000118282 10006 ntAPPRIS P1 TSL 5 BASIC5.11□□□□□ -1.59
Hoxd3P09027 Gm9226-201ENSMUST00000188352 3489 ntBASIC5.11□□□□□ -1.59
Hoxd3P09027 Olfr364-ps1-201ENSMUST00000104995 1766 ntAPPRIS P1 TSL 5 BASIC5.11□□□□□ -1.59
Hoxd3P09027 Gm18913-201ENSMUST00000204311 1789 ntBASIC5.11□□□□□ -1.59
Hoxd3P09027 Catsperg1-201ENSMUST00000047846 3566 ntTSL 5 BASIC5.11□□□□□ -1.59
Hoxd3P09027 Slfn4-203ENSMUST00000215472 1830 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
Hoxd3P09027 Nlrc3-204ENSMUST00000180200 3842 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
Hoxd3P09027 Nedd4-207ENSMUST00000184333 4034 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
Hoxd3P09027 Tank-205ENSMUST00000112502 2016 ntAPPRIS ALT2 TSL 5 BASIC5.11□□□□□ -1.59
Hoxd3P09027 Tank-201ENSMUST00000078074 2018 ntAPPRIS P3 TSL 1 (best) BASIC5.11□□□□□ -1.59
Hoxd3P09027 Dlgap5-208ENSMUST00000180299 4067 ntAPPRIS ALT2 TSL 2 BASIC5.11□□□□□ -1.59
Hoxd3P09027 Sult2a8-201ENSMUST00000063509 2143 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
Hoxd3P09027 CT030159.1-201ENSMUST00000221580 2261 ntBASIC5.11□□□□□ -1.59
Hoxd3P09027 Zfp607b-202ENSMUST00000120004 4612 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
Hoxd3P09027 Rasgrp3-202ENSMUST00000164192 4665 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
Hoxd3P09027 Vmn1r22-206ENSMUST00000228905 2394 ntBASIC5.11□□□□□ -1.59
Hoxd3P09027 AC135119.1-204ENSMUST00000228036 2663 ntBASIC5.1□□□□□ -1.59
Hoxd3P09027 Lncenc1-202ENSMUST00000179324 2764 ntTSL 2 BASIC5.1□□□□□ -1.59
Hoxd3P09027 Vmn1r188-202ENSMUST00000226680 8374 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
Hoxd3P09027 Krt222-202ENSMUST00000103132 3072 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
Hoxd3P09027 Iars-202ENSMUST00000164260 3789 ntAPPRIS P1 TSL 5 BASIC5.1□□□□□ -1.59
Hoxd3P09027 Atp8b4-202ENSMUST00000040149 3986 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
Hoxd3P09027 Olfr1250-202ENSMUST00000111527 4386 ntAPPRIS P1 TSL 2 BASIC5.1□□□□□ -1.59
Hoxd3P09027 Gm10855-201ENSMUST00000100426 2541 ntBASIC5.1□□□□□ -1.59
Hoxd3P09027 Trav10n-201ENSMUST00000103612 343 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
Hoxd3P09027 Rnu11-201ENSMUST00000104135 134 ntBASIC5.1□□□□□ -1.59
Hoxd3P09027 Gm23485-201ENSMUST00000104181 155 ntBASIC5.1□□□□□ -1.59
Hoxd3P09027 Sdr16c6-202ENSMUST00000108383 1923 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
Hoxd3P09027 Gm13991-201ENSMUST00000120190 648 ntBASIC5.1□□□□□ -1.59
Hoxd3P09027 Gm15096-201ENSMUST00000121918 878 ntBASIC5.1□□□□□ -1.59
Retrieved 100 of 76,532 protein–RNA pairs in 81.5 ms