Protein–RNA interactions for Protein: A2AX52

Col6a4, Collagen alpha-4(VI) chain, mousemouse

Predictions only

Length 2,309 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a4A2AX52 Slc22a22-202ENSMUST00000110196 2368 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
Col6a4A2AX52 Zfp322a-201ENSMUST00000050101 4844 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
Col6a4A2AX52 Gm37776-201ENSMUST00000193471 2497 ntBASIC3.36□□□□□ -1.87
Col6a4A2AX52 Gm37011-201ENSMUST00000195543 2935 ntBASIC3.36□□□□□ -1.87
Col6a4A2AX52 Olfr389-201ENSMUST00000122224 3057 ntAPPRIS P1 TSL 2 BASIC3.36□□□□□ -1.87
Col6a4A2AX52 Vmn1r34-206ENSMUST00000228498 3078 ntAPPRIS P1 BASIC3.36□□□□□ -1.87
Col6a4A2AX52 Gm42717-201ENSMUST00000197309 3463 ntBASIC3.36□□□□□ -1.87
Col6a4A2AX52 Med14-203ENSMUST00000115481 3729 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
Col6a4A2AX52 0610010F05Rik-201ENSMUST00000043356 4392 ntAPPRIS P2 TSL 5 BASIC3.36□□□□□ -1.87
Col6a4A2AX52 Atrx-202ENSMUST00000113573 10275 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
Col6a4A2AX52 Slfn8-203ENSMUST00000108152 3083 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
Col6a4A2AX52 Gm11403-201ENSMUST00000122195 369 ntBASIC3.36□□□□□ -1.87
Col6a4A2AX52 Gm4134-201ENSMUST00000173244 563 ntBASIC3.36□□□□□ -1.87
Col6a4A2AX52 Gm25535-201ENSMUST00000175364 125 ntBASIC3.36□□□□□ -1.87
Col6a4A2AX52 Gm18594-201ENSMUST00000175733 1403 ntBASIC3.36□□□□□ -1.87
Col6a4A2AX52 Gm3434-202ENSMUST00000184421 521 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
Col6a4A2AX52 Gm28941-201ENSMUST00000185536 1017 ntBASIC3.36□□□□□ -1.87
Col6a4A2AX52 Gm4567-202ENSMUST00000190554 1581 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
Col6a4A2AX52 Gm10668-202ENSMUST00000191073 1581 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
Col6a4A2AX52 Gm37050-201ENSMUST00000193464 466 ntBASIC3.36□□□□□ -1.87
Col6a4A2AX52 Gm42825-201ENSMUST00000198883 723 ntTSL 2 BASIC3.36□□□□□ -1.87
Col6a4A2AX52 Gm38562-201ENSMUST00000199398 1126 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
Col6a4A2AX52 Gm43424-201ENSMUST00000200484 253 ntBASIC3.36□□□□□ -1.87
Col6a4A2AX52 Gm45149-201ENSMUST00000206459 2172 ntBASIC3.36□□□□□ -1.87
Col6a4A2AX52 Gm44587-201ENSMUST00000207399 1685 ntBASIC3.36□□□□□ -1.87
Col6a4A2AX52 Olfr584-202ENSMUST00000214215 3152 ntAPPRIS P1 TSL 5 BASIC3.36□□□□□ -1.87
Col6a4A2AX52 Olfr1082-201ENSMUST00000215600 1620 ntAPPRIS P1 TSL 3 BASIC3.36□□□□□ -1.87
Col6a4A2AX52 Gm281-201ENSMUST00000144914 2952 ntAPPRIS P1 TSL 5 BASIC3.35□□□□□ -1.87
Col6a4A2AX52 Fus-202ENSMUST00000079045 2623 ntBASIC3.35□□□□□ -1.87
Col6a4A2AX52 Olfr397-202ENSMUST00000213134 4048 ntAPPRIS P1 TSL 5 BASIC3.35□□□□□ -1.87
Col6a4A2AX52 Rps6ka3-204ENSMUST00000112493 3671 ntTSL 5 BASIC3.35□□□□□ -1.87
Col6a4A2AX52 Ccnb3-202ENSMUST00000115752 4554 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
Col6a4A2AX52 Olfr1369-ps1-203ENSMUST00000213922 3930 ntAPPRIS P1 TSL 5 BASIC3.35□□□□□ -1.87
Col6a4A2AX52 Gm13787-201ENSMUST00000120422 168 ntBASIC3.35□□□□□ -1.87
Col6a4A2AX52 Olfr1118-201ENSMUST00000121296 996 ntAPPRIS P2 BASIC3.35□□□□□ -1.87
Col6a4A2AX52 Gm25105-201ENSMUST00000122477 130 ntBASIC3.35□□□□□ -1.87
Col6a4A2AX52 Gm7497-201ENSMUST00000183064 1003 ntBASIC3.35□□□□□ -1.87
Col6a4A2AX52 1700128A07Rik-201ENSMUST00000186311 860 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
Col6a4A2AX52 Gm37343-201ENSMUST00000192542 111 ntBASIC3.35□□□□□ -1.87
Col6a4A2AX52 Gm38279-201ENSMUST00000194067 1131 ntBASIC3.35□□□□□ -1.87
Col6a4A2AX52 Cycs-ps2-201ENSMUST00000197114 292 ntBASIC3.35□□□□□ -1.87
Col6a4A2AX52 Gm5995-201ENSMUST00000204107 1273 ntBASIC3.35□□□□□ -1.87
Col6a4A2AX52 Gm44784-201ENSMUST00000207396 460 ntTSL 5 BASIC3.35□□□□□ -1.87
Col6a4A2AX52 Gm32507-201ENSMUST00000209552 437 ntTSL 5 BASIC3.35□□□□□ -1.87
Col6a4A2AX52 Olfr367-ps-203ENSMUST00000213819 541 ntTSL 3 BASIC3.35□□□□□ -1.87
Col6a4A2AX52 AC125379.1-201ENSMUST00000221928 111 ntBASIC3.35□□□□□ -1.87
Col6a4A2AX52 AC144798.1-201ENSMUST00000228120 391 ntBASIC3.35□□□□□ -1.87
Col6a4A2AX52 Gm25818-201ENSMUST00000083282 164 ntBASIC3.35□□□□□ -1.87
Col6a4A2AX52 Olfr642-202ENSMUST00000214299 4715 ntAPPRIS P1 TSL 5 BASIC3.35□□□□□ -1.87
Col6a4A2AX52 AC168274.1-201ENSMUST00000218657 1864 ntTSL 5 BASIC3.35□□□□□ -1.87
Col6a4A2AX52 4933434E20Rik-201ENSMUST00000029551 3097 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
Col6a4A2AX52 Gm21854-202ENSMUST00000190391 1480 ntAPPRIS P1 TSL 5 BASIC3.35□□□□□ -1.87
Col6a4A2AX52 Olfr733-204ENSMUST00000216195 3669 ntAPPRIS P1 TSL 5 BASIC3.35□□□□□ -1.87
Col6a4A2AX52 Gm31371-201ENSMUST00000211848 2088 ntAPPRIS P1 TSL 5 BASIC3.35□□□□□ -1.87
Col6a4A2AX52 Arrdc3-201ENSMUST00000099356 4101 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
Col6a4A2AX52 Gm37718-201ENSMUST00000191655 2631 ntBASIC3.35□□□□□ -1.87
Col6a4A2AX52 Vmn1r127-201ENSMUST00000105199 918 ntAPPRIS P1 BASIC3.35□□□□□ -1.87
Col6a4A2AX52 Gm12095-201ENSMUST00000121962 816 ntBASIC3.35□□□□□ -1.87
Col6a4A2AX52 Gm12909-201ENSMUST00000134190 620 ntTSL 2 BASIC3.35□□□□□ -1.87
Col6a4A2AX52 Vmn1r103-201ENSMUST00000163461 918 ntAPPRIS P1 BASIC3.35□□□□□ -1.87
Col6a4A2AX52 Gm17109-201ENSMUST00000163985 358 ntBASIC3.35□□□□□ -1.87
Col6a4A2AX52 Gt(ROSA)26Sor-204ENSMUST00000167415 551 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
Col6a4A2AX52 Gm8298-201ENSMUST00000179799 1206 ntAPPRIS P1 TSL 5 BASIC3.35□□□□□ -1.87
Col6a4A2AX52 Gm28269-201ENSMUST00000189511 559 ntAPPRIS P1 TSL 3 BASIC3.35□□□□□ -1.87
Col6a4A2AX52 Gm20239-201ENSMUST00000196610 982 ntBASIC3.35□□□□□ -1.87
Col6a4A2AX52 AC127270.2-201ENSMUST00000221337 247 ntBASIC3.35□□□□□ -1.87
Col6a4A2AX52 AC140209.1-204ENSMUST00000226736 739 ntBASIC3.35□□□□□ -1.87
Col6a4A2AX52 Olfr273-201ENSMUST00000051520 1059 ntAPPRIS P1 BASIC3.35□□□□□ -1.87
Col6a4A2AX52 Olfr724-201ENSMUST00000075030 1006 ntAPPRIS P1 BASIC3.35□□□□□ -1.87
Col6a4A2AX52 Gm45324-201ENSMUST00000211193 5638 ntBASIC3.34□□□□□ -1.87
Col6a4A2AX52 AC153563.1-202ENSMUST00000217695 1838 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
Col6a4A2AX52 AC137842.3-201ENSMUST00000228855 2397 ntBASIC3.34□□□□□ -1.87
Col6a4A2AX52 Zfp426-208ENSMUST00000166005 1653 ntAPPRIS P3 TSL 5 BASIC3.34□□□□□ -1.87
Col6a4A2AX52 Klhl15-204ENSMUST00000113915 6241 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
Col6a4A2AX52 Mef2c-201ENSMUST00000005722 6217 ntTSL 5 BASIC3.34□□□□□ -1.87
Col6a4A2AX52 Gm11719-201ENSMUST00000119399 351 ntBASIC3.34□□□□□ -1.87
Col6a4A2AX52 Gm13174-201ENSMUST00000126141 220 ntTSL 3 BASIC3.34□□□□□ -1.87
Col6a4A2AX52 Gm23755-201ENSMUST00000157578 343 ntBASIC3.34□□□□□ -1.87
Col6a4A2AX52 Gm22840-201ENSMUST00000158444 136 ntBASIC3.34□□□□□ -1.87
Col6a4A2AX52 4933433F19Rik-201ENSMUST00000180571 1088 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
Col6a4A2AX52 Gm17781-201ENSMUST00000195232 649 ntBASIC3.34□□□□□ -1.87
Col6a4A2AX52 1700012D16Rik-201ENSMUST00000197231 577 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
Col6a4A2AX52 Gm36259-201ENSMUST00000197340 392 ntBASIC3.34□□□□□ -1.87
Col6a4A2AX52 Gm7041-201ENSMUST00000201227 524 ntBASIC3.34□□□□□ -1.87
Col6a4A2AX52 Gm45420-201ENSMUST00000211243 425 ntBASIC3.34□□□□□ -1.87
Col6a4A2AX52 4930556N09Rik-202ENSMUST00000219466 1015 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
Col6a4A2AX52 Mir128-1-201ENSMUST00000083586 70 ntBASIC3.34□□□□□ -1.87
Col6a4A2AX52 5330437M03Rik-201ENSMUST00000201318 4083 ntBASIC3.34□□□□□ -1.87
Col6a4A2AX52 Gm43870-201ENSMUST00000205102 4369 ntBASIC3.34□□□□□ -1.87
Col6a4A2AX52 6720489N17Rik-202ENSMUST00000201563 2640 ntAPPRIS P2 TSL 1 (best) BASIC3.34□□□□□ -1.88
Col6a4A2AX52 Ncoa7-207ENSMUST00000215740 7043 ntAPPRIS P3 TSL 1 (best) BASIC3.34□□□□□ -1.88
Col6a4A2AX52 Zfp595-203ENSMUST00000168892 4040 ntAPPRIS P2 TSL 1 (best) BASIC3.34□□□□□ -1.88
Col6a4A2AX52 Nae1-201ENSMUST00000034349 1808 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.88
Col6a4A2AX52 Gm8104-201ENSMUST00000168165 1761 ntAPPRIS P1 TSL 5 BASIC3.34□□□□□ -1.88
Col6a4A2AX52 Trim30a-201ENSMUST00000076922 3771 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.88
Col6a4A2AX52 Vmn1r202-202ENSMUST00000228020 5441 ntAPPRIS P1 BASIC3.34□□□□□ -1.88
Col6a4A2AX52 Gm38126-201ENSMUST00000195297 4003 ntBASIC3.34□□□□□ -1.88
Col6a4A2AX52 Olfr1311-202ENSMUST00000213602 2631 ntAPPRIS P1 TSL 5 BASIC3.33□□□□□ -1.88
Col6a4A2AX52 Zfp935-201ENSMUST00000076195 1631 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
Col6a4A2AX52 Olfr733-202ENSMUST00000214372 3530 ntAPPRIS P1 TSL 5 BASIC3.33□□□□□ -1.88
Retrieved 100 of 76,532 protein–RNA pairs in 67.3 ms