Protein–RNA interactions for Protein: A2APF3

Ctcfl, Transcriptional repressor CTCFL, mousemouse

Predictions only

Length 636 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CtcflA2APF3 Kctd4-201ENSMUST00000050120 3998 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
CtcflA2APF3 Arpp19-203ENSMUST00000166549 1747 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
CtcflA2APF3 Olfr1255-202ENSMUST00000214508 2253 ntAPPRIS P1 TSL 5 BASIC3.92□□□□□ -1.78
CtcflA2APF3 Vmn1r195-202ENSMUST00000228711 3056 ntAPPRIS P1 BASIC3.92□□□□□ -1.78
CtcflA2APF3 Arrdc3-201ENSMUST00000099356 4101 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
CtcflA2APF3 Rtl4-201ENSMUST00000096301 1758 ntAPPRIS P1 BASIC3.92□□□□□ -1.78
CtcflA2APF3 Ifi203-ps-201ENSMUST00000155076 2556 ntBASIC3.92□□□□□ -1.78
CtcflA2APF3 Olfr944-203ENSMUST00000215306 1523 ntAPPRIS P1 TSL 5 BASIC3.92□□□□□ -1.78
CtcflA2APF3 Olfr112-201ENSMUST00000085548 3103 ntAPPRIS P1 TSL 5 BASIC3.92□□□□□ -1.78
CtcflA2APF3 Gm3443-201ENSMUST00000112772 285 ntAPPRIS P1 TSL 3 BASIC3.92□□□□□ -1.78
CtcflA2APF3 Gm15553-201ENSMUST00000118757 430 ntBASIC3.92□□□□□ -1.78
CtcflA2APF3 Gm9078-201ENSMUST00000119126 617 ntBASIC3.92□□□□□ -1.78
CtcflA2APF3 Gm12734-201ENSMUST00000120228 948 ntBASIC3.92□□□□□ -1.78
CtcflA2APF3 Gm13788-201ENSMUST00000120767 601 ntBASIC3.92□□□□□ -1.78
CtcflA2APF3 Gm11910-201ENSMUST00000121624 432 ntBASIC3.92□□□□□ -1.78
CtcflA2APF3 Gm13874-201ENSMUST00000130680 809 ntTSL 5 BASIC3.92□□□□□ -1.78
CtcflA2APF3 Gm14710-201ENSMUST00000146082 1066 ntBASIC3.92□□□□□ -1.78
CtcflA2APF3 Gm14618-201ENSMUST00000149377 740 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
CtcflA2APF3 Gm15414-201ENSMUST00000155217 440 ntTSL 3 BASIC3.92□□□□□ -1.78
CtcflA2APF3 Gm26098-201ENSMUST00000157247 288 ntBASIC3.92□□□□□ -1.78
CtcflA2APF3 Gm24930-201ENSMUST00000158315 83 ntBASIC3.92□□□□□ -1.78
CtcflA2APF3 1700071M16Rik-201ENSMUST00000164150 537 ntTSL 3 BASIC3.92□□□□□ -1.78
CtcflA2APF3 Malat1-203ENSMUST00000173499 485 ntTSL 3 BASIC3.92□□□□□ -1.78
CtcflA2APF3 Olfr296-ps1-201ENSMUST00000173904 1102 ntAPPRIS P1 TSL 5 BASIC3.92□□□□□ -1.78
CtcflA2APF3 Vmn2r-ps124-201ENSMUST00000176236 903 ntBASIC3.92□□□□□ -1.78
CtcflA2APF3 Gm27718-201ENSMUST00000183721 86 ntBASIC3.92□□□□□ -1.78
CtcflA2APF3 1700003C15Rik-202ENSMUST00000188236 710 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
CtcflA2APF3 Gm29387-201ENSMUST00000189074 623 ntTSL 3 BASIC3.92□□□□□ -1.78
CtcflA2APF3 Gm29133-201ENSMUST00000189155 885 ntAPPRIS P1 TSL 5 BASIC3.92□□□□□ -1.78
CtcflA2APF3 Gm28877-201ENSMUST00000191349 604 ntBASIC3.92□□□□□ -1.78
CtcflA2APF3 Gm37543-201ENSMUST00000192443 1031 ntBASIC3.92□□□□□ -1.78
CtcflA2APF3 Gm37815-201ENSMUST00000195665 411 ntTSL 5 BASIC3.92□□□□□ -1.78
CtcflA2APF3 Gm5660-201ENSMUST00000197453 1149 ntBASIC3.92□□□□□ -1.78
CtcflA2APF3 Gm44054-201ENSMUST00000203814 372 ntBASIC3.92□□□□□ -1.78
CtcflA2APF3 Gm19039-201ENSMUST00000204363 575 ntBASIC3.92□□□□□ -1.78
CtcflA2APF3 Olfr747-202ENSMUST00000205373 1132 ntAPPRIS P1 TSL 5 BASIC3.92□□□□□ -1.78
CtcflA2APF3 Gm44603-201ENSMUST00000206820 367 ntBASIC3.92□□□□□ -1.78
CtcflA2APF3 AC158686.2-201ENSMUST00000218599 976 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
CtcflA2APF3 AC154724.1-201ENSMUST00000225782 821 ntBASIC3.92□□□□□ -1.78
CtcflA2APF3 AC154657.1-201ENSMUST00000226394 775 ntBASIC3.92□□□□□ -1.78
CtcflA2APF3 Mucl2-202ENSMUST00000226584 823 ntAPPRIS ALT2 BASIC3.92□□□□□ -1.78
CtcflA2APF3 AC121542.1-201ENSMUST00000227245 721 ntBASIC3.92□□□□□ -1.78
CtcflA2APF3 AC112142.1-206ENSMUST00000228136 982 ntBASIC3.92□□□□□ -1.78
CtcflA2APF3 Olfr924-201ENSMUST00000072977 927 ntAPPRIS P1 BASIC3.92□□□□□ -1.78
CtcflA2APF3 Olfr547-201ENSMUST00000098229 936 ntAPPRIS P1 BASIC3.92□□□□□ -1.78
CtcflA2APF3 Mdga2-211ENSMUST00000222623 1449 ntTSL 5 BASIC3.92□□□□□ -1.78
CtcflA2APF3 Zfp595-201ENSMUST00000109735 3896 ntAPPRIS P2 TSL 1 (best) BASIC3.92□□□□□ -1.78
CtcflA2APF3 Vmn1r42-202ENSMUST00000226436 4045 ntAPPRIS P1 BASIC3.92□□□□□ -1.78
CtcflA2APF3 4921515E04Rik-202ENSMUST00000226383 1738 ntBASIC3.92□□□□□ -1.78
CtcflA2APF3 Lrif1-201ENSMUST00000098750 3103 ntAPPRIS P1 TSL 5 BASIC3.92□□□□□ -1.78
CtcflA2APF3 Gm45264-201ENSMUST00000210090 3995 ntBASIC3.92□□□□□ -1.78
CtcflA2APF3 AC190403.1-201ENSMUST00000224515 1325 ntBASIC3.92□□□□□ -1.78
CtcflA2APF3 Olfr711-201ENSMUST00000051715 3035 ntAPPRIS P1 TSL 2 BASIC3.92□□□□□ -1.78
CtcflA2APF3 Gm42704-201ENSMUST00000196875 1778 ntBASIC3.91□□□□□ -1.78
CtcflA2APF3 Gm5447-201ENSMUST00000070258 1773 ntAPPRIS P1 BASIC3.91□□□□□ -1.78
CtcflA2APF3 Obscn-203ENSMUST00000052872 23006 ntTSL 5 BASIC3.91□□□□□ -1.78
CtcflA2APF3 Nxf2-203ENSMUST00000113189 2375 ntAPPRIS P3 TSL 1 (best) BASIC3.91□□□□□ -1.78
CtcflA2APF3 Tex47-203ENSMUST00000160634 2881 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
CtcflA2APF3 Tcrg-C2-201ENSMUST00000103561 914 ntAPPRIS P1 BASIC3.91□□□□□ -1.78
CtcflA2APF3 Olfr1094-201ENSMUST00000105211 1147 ntAPPRIS P1 BASIC3.91□□□□□ -1.78
CtcflA2APF3 Tmco2-201ENSMUST00000106268 719 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
CtcflA2APF3 Gm13664-201ENSMUST00000117304 345 ntBASIC3.91□□□□□ -1.78
CtcflA2APF3 Gm13785-201ENSMUST00000119099 690 ntBASIC3.91□□□□□ -1.78
CtcflA2APF3 Gm14500-201ENSMUST00000121647 113 ntBASIC3.91□□□□□ -1.78
CtcflA2APF3 4931428L18Rik-202ENSMUST00000135245 889 ntAPPRIS P5 TSL 1 (best) BASIC3.91□□□□□ -1.78
CtcflA2APF3 Gm13209-201ENSMUST00000138492 494 ntTSL 5 BASIC3.91□□□□□ -1.78
CtcflA2APF3 4933430M04Rik-201ENSMUST00000152726 744 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
CtcflA2APF3 Gm15767-202ENSMUST00000153786 544 ntTSL 3 BASIC3.91□□□□□ -1.78
CtcflA2APF3 Gm22226-201ENSMUST00000157355 109 ntBASIC3.91□□□□□ -1.78
CtcflA2APF3 Gm24774-201ENSMUST00000157384 134 ntBASIC3.91□□□□□ -1.78
CtcflA2APF3 Gm8374-201ENSMUST00000163826 672 ntAPPRIS P1 TSL 5 BASIC3.91□□□□□ -1.78
CtcflA2APF3 Mir3090-201ENSMUST00000175597 87 ntBASIC3.91□□□□□ -1.78
CtcflA2APF3 Gm21834-201ENSMUST00000178907 453 ntAPPRIS P1 BASIC3.91□□□□□ -1.78
CtcflA2APF3 V1rg10-201ENSMUST00000183378 937 ntBASIC3.91□□□□□ -1.78
CtcflA2APF3 Gm27976-201ENSMUST00000183635 162 ntBASIC3.91□□□□□ -1.78
CtcflA2APF3 Gm5372-201ENSMUST00000187540 409 ntBASIC3.91□□□□□ -1.78
CtcflA2APF3 1700006F04Rik-201ENSMUST00000188582 441 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
CtcflA2APF3 Gm6546-201ENSMUST00000192096 766 ntBASIC3.91□□□□□ -1.78
CtcflA2APF3 Olfr416-ps1-201ENSMUST00000192734 804 ntBASIC3.91□□□□□ -1.78
CtcflA2APF3 Gm18382-201ENSMUST00000194394 582 ntBASIC3.91□□□□□ -1.78
CtcflA2APF3 Gm43350-201ENSMUST00000196382 711 ntBASIC3.91□□□□□ -1.78
CtcflA2APF3 Gm44343-201ENSMUST00000196702 90 ntBASIC3.91□□□□□ -1.78
CtcflA2APF3 Tshb-206ENSMUST00000200041 537 ntAPPRIS P1 TSL 5 BASIC3.91□□□□□ -1.78
CtcflA2APF3 Gm45096-201ENSMUST00000205833 427 ntTSL 3 BASIC3.91□□□□□ -1.78
CtcflA2APF3 Gm44761-201ENSMUST00000209080 440 ntTSL 2 BASIC3.91□□□□□ -1.78
CtcflA2APF3 Gm7588-201ENSMUST00000216866 571 ntBASIC3.91□□□□□ -1.78
CtcflA2APF3 AC147615.1-201ENSMUST00000218914 441 ntBASIC3.91□□□□□ -1.78
CtcflA2APF3 AC211878.2-201ENSMUST00000222486 488 ntBASIC3.91□□□□□ -1.78
CtcflA2APF3 AC124549.2-201ENSMUST00000224243 222 ntBASIC3.91□□□□□ -1.78
CtcflA2APF3 AC133598.4-202ENSMUST00000225267 469 ntBASIC3.91□□□□□ -1.78
CtcflA2APF3 U90926-201ENSMUST00000031356 520 ntAPPRIS ALT2 TSL 5 BASIC3.91□□□□□ -1.78
CtcflA2APF3 Olfr693-201ENSMUST00000057817 952 ntAPPRIS P1 BASIC3.91□□□□□ -1.78
CtcflA2APF3 Tas2r104-201ENSMUST00000072404 909 ntAPPRIS P1 BASIC3.91□□□□□ -1.78
CtcflA2APF3 Olfr135-201ENSMUST00000076245 1079 ntAPPRIS P1 BASIC3.91□□□□□ -1.78
CtcflA2APF3 Eif1-ps1-201ENSMUST00000086606 330 ntBASIC3.91□□□□□ -1.78
CtcflA2APF3 Gm5615-201ENSMUST00000098900 2348 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
CtcflA2APF3 AC153150.1-201ENSMUST00000226065 3782 ntBASIC3.91□□□□□ -1.78
CtcflA2APF3 Fam205c-202ENSMUST00000107978 1451 ntAPPRIS ALT2 TSL 1 (best) BASIC3.91□□□□□ -1.78
CtcflA2APF3 Hyal6-201ENSMUST00000031690 3452 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.78
CtcflA2APF3 Gm36960-201ENSMUST00000195491 2035 ntBASIC3.9□□□□□ -1.78
Retrieved 100 of 76,532 protein–RNA pairs in 95.9 ms