Protein–RNA interactions for Protein: Q9R1R2

Trim3, Tripartite motif-containing protein 3, mousemouse

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim3Q9R1R2 Gm17657-201ENSMUST00000168877 510 ntAPPRIS P1 BASIC4.17□□□□□ -1.74
Trim3Q9R1R2 Gm18128-201ENSMUST00000172625 511 ntBASIC4.17□□□□□ -1.74
Trim3Q9R1R2 Gm6214-201ENSMUST00000178845 541 ntBASIC4.17□□□□□ -1.74
Trim3Q9R1R2 Olr1-204ENSMUST00000183258 468 ntAPPRIS ALT2 TSL 1 (best) BASIC4.17□□□□□ -1.74
Trim3Q9R1R2 Gm27976-201ENSMUST00000183635 162 ntBASIC4.17□□□□□ -1.74
Trim3Q9R1R2 Gm29527-201ENSMUST00000190722 622 ntTSL 5 BASIC4.17□□□□□ -1.74
Trim3Q9R1R2 1700063I16Rik-201ENSMUST00000194611 611 ntBASIC4.17□□□□□ -1.74
Trim3Q9R1R2 Gm37167-201ENSMUST00000194946 396 ntBASIC4.17□□□□□ -1.74
Trim3Q9R1R2 6030400A10Rik-201ENSMUST00000199734 1212 ntBASIC4.17□□□□□ -1.74
Trim3Q9R1R2 9330118I20Rik-201ENSMUST00000203390 1066 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
Trim3Q9R1R2 Ceacam-ps1-202ENSMUST00000206683 630 ntBASIC4.17□□□□□ -1.74
Trim3Q9R1R2 4930401A07Rik-202ENSMUST00000216155 360 ntTSL 2 BASIC4.17□□□□□ -1.74
Trim3Q9R1R2 Gm46327-201ENSMUST00000218240 365 ntBASIC4.17□□□□□ -1.74
Trim3Q9R1R2 AC135377.1-201ENSMUST00000223692 463 ntBASIC4.17□□□□□ -1.74
Trim3Q9R1R2 AC154576.1-201ENSMUST00000225864 563 ntBASIC4.17□□□□□ -1.74
Trim3Q9R1R2 AC158955.1-201ENSMUST00000227140 385 ntBASIC4.17□□□□□ -1.74
Trim3Q9R1R2 Krtap31-2-201ENSMUST00000058761 935 ntAPPRIS P1 BASIC4.17□□□□□ -1.74
Trim3Q9R1R2 Zfp982-201ENSMUST00000063704 1244 ntAPPRIS P1 TSL 3 BASIC4.17□□□□□ -1.74
Trim3Q9R1R2 Gm22423-201ENSMUST00000082861 184 ntBASIC4.17□□□□□ -1.74
Trim3Q9R1R2 Gm26072-201ENSMUST00000083135 107 ntBASIC4.17□□□□□ -1.74
Trim3Q9R1R2 Olfr1249-201ENSMUST00000099769 957 ntAPPRIS P1 BASIC4.17□□□□□ -1.74
Trim3Q9R1R2 Igip-201ENSMUST00000210490 1417 ntAPPRIS P1 BASIC4.17□□□□□ -1.74
Trim3Q9R1R2 Gm43705-201ENSMUST00000195958 3717 ntBASIC4.17□□□□□ -1.74
Trim3Q9R1R2 Olfr148-202ENSMUST00000216801 2775 ntAPPRIS P1 TSL 5 BASIC4.17□□□□□ -1.74
Trim3Q9R1R2 Foxr2-202ENSMUST00000163801 3072 ntAPPRIS P1 TSL 5 BASIC4.17□□□□□ -1.74
Trim3Q9R1R2 Vmn1r47-203ENSMUST00000227811 6792 ntAPPRIS P1 BASIC4.17□□□□□ -1.74
Trim3Q9R1R2 Dnah12-201ENSMUST00000022433 12009 ntAPPRIS P1 TSL 5 BASIC4.17□□□□□ -1.74
Trim3Q9R1R2 Cftr-203ENSMUST00000115406 4341 ntAPPRIS ALT2 TSL 5 BASIC4.17□□□□□ -1.74
Trim3Q9R1R2 Gm42843-201ENSMUST00000196328 3616 ntBASIC4.16□□□□□ -1.74
Trim3Q9R1R2 Olfr826-203ENSMUST00000216661 2858 ntAPPRIS P1 TSL 3 BASIC4.16□□□□□ -1.74
Trim3Q9R1R2 Abca5-201ENSMUST00000043961 8231 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
Trim3Q9R1R2 Obscn-201ENSMUST00000020732 23483 ntTSL 5 BASIC4.16□□□□□ -1.74
Trim3Q9R1R2 Gm24469-201ENSMUST00000104487 131 ntBASIC4.16□□□□□ -1.74
Trim3Q9R1R2 Gm24855-201ENSMUST00000104848 97 ntBASIC4.16□□□□□ -1.74
Trim3Q9R1R2 Bpifc-202ENSMUST00000105304 451 ntTSL 5 BASIC4.16□□□□□ -1.74
Trim3Q9R1R2 Clec1b-203ENSMUST00000112081 614 ntAPPRIS ALT2 TSL 1 (best) BASIC4.16□□□□□ -1.74
Trim3Q9R1R2 Rps12-ps26-201ENSMUST00000117751 333 ntBASIC4.16□□□□□ -1.74
Trim3Q9R1R2 Gm14878-201ENSMUST00000118167 293 ntBASIC4.16□□□□□ -1.74
Trim3Q9R1R2 Gm13677-201ENSMUST00000120739 595 ntBASIC4.16□□□□□ -1.74
Trim3Q9R1R2 Gm14303-201ENSMUST00000121320 171 ntBASIC4.16□□□□□ -1.74
Trim3Q9R1R2 Gm13470-201ENSMUST00000123911 421 ntTSL 2 BASIC4.16□□□□□ -1.74
Trim3Q9R1R2 Sox5os5-201ENSMUST00000152192 207 ntTSL 3 BASIC4.16□□□□□ -1.74
Trim3Q9R1R2 Mir1947-201ENSMUST00000158235 85 ntBASIC4.16□□□□□ -1.74
Trim3Q9R1R2 Gm25447-201ENSMUST00000158997 128 ntBASIC4.16□□□□□ -1.74
Trim3Q9R1R2 Lipo1-202ENSMUST00000178735 1188 ntAPPRIS ALT2 TSL 5 BASIC4.16□□□□□ -1.74
Trim3Q9R1R2 Nutf2-ps2-201ENSMUST00000179225 384 ntBASIC4.16□□□□□ -1.74
Trim3Q9R1R2 Gm4842-201ENSMUST00000183237 835 ntBASIC4.16□□□□□ -1.74
Trim3Q9R1R2 Gm27165-201ENSMUST00000183951 232 ntBASIC4.16□□□□□ -1.74
Trim3Q9R1R2 Gm27568-201ENSMUST00000184220 99 ntBASIC4.16□□□□□ -1.74
Trim3Q9R1R2 Gm28830-201ENSMUST00000188192 213 ntBASIC4.16□□□□□ -1.74
Trim3Q9R1R2 1700027A15Rik-202ENSMUST00000188349 617 ntTSL 3 BASIC4.16□□□□□ -1.74
Trim3Q9R1R2 Gm29387-201ENSMUST00000189074 623 ntTSL 3 BASIC4.16□□□□□ -1.74
Trim3Q9R1R2 Gm29186-201ENSMUST00000189178 660 ntTSL 2 BASIC4.16□□□□□ -1.74
Trim3Q9R1R2 Gm19280-201ENSMUST00000190191 205 ntBASIC4.16□□□□□ -1.74
Trim3Q9R1R2 Gm18181-201ENSMUST00000190670 736 ntBASIC4.16□□□□□ -1.74
Trim3Q9R1R2 Gm37102-201ENSMUST00000195740 1105 ntBASIC4.16□□□□□ -1.74
Trim3Q9R1R2 Cycs-ps2-201ENSMUST00000197114 292 ntBASIC4.16□□□□□ -1.74
Trim3Q9R1R2 Gm5660-201ENSMUST00000197453 1149 ntBASIC4.16□□□□□ -1.74
Trim3Q9R1R2 Gm44054-201ENSMUST00000203814 372 ntBASIC4.16□□□□□ -1.74
Trim3Q9R1R2 C430039J01Rik-201ENSMUST00000205973 957 ntBASIC4.16□□□□□ -1.74
Trim3Q9R1R2 Gm44813-201ENSMUST00000207921 361 ntTSL 3 BASIC4.16□□□□□ -1.74
Trim3Q9R1R2 Gm3690-201ENSMUST00000211341 262 ntBASIC4.16□□□□□ -1.74
Trim3Q9R1R2 AL513022.1-201ENSMUST00000220489 504 ntTSL 5 BASIC4.16□□□□□ -1.74
Trim3Q9R1R2 AC122924.1-201ENSMUST00000222044 163 ntBASIC4.16□□□□□ -1.74
Trim3Q9R1R2 AC139758.1-201ENSMUST00000226573 930 ntBASIC4.16□□□□□ -1.74
Trim3Q9R1R2 AC167013.2-202ENSMUST00000227035 333 ntBASIC4.16□□□□□ -1.74
Trim3Q9R1R2 Olfr202-201ENSMUST00000049859 924 ntAPPRIS P1 BASIC4.16□□□□□ -1.74
Trim3Q9R1R2 Olfr827-201ENSMUST00000058123 1058 ntAPPRIS P1 BASIC4.16□□□□□ -1.74
Trim3Q9R1R2 Apoo-ps-201ENSMUST00000061241 586 ntBASIC4.16□□□□□ -1.74
Trim3Q9R1R2 BC023105-201ENSMUST00000073997 1227 ntBASIC4.16□□□□□ -1.74
Trim3Q9R1R2 Olfr911-ps1-201ENSMUST00000074987 940 ntAPPRIS P1 BASIC4.16□□□□□ -1.74
Trim3Q9R1R2 n-R5s182-201ENSMUST00000083889 107 ntBASIC4.16□□□□□ -1.74
Trim3Q9R1R2 Gm45697-201ENSMUST00000212893 2876 ntBASIC4.16□□□□□ -1.74
Trim3Q9R1R2 C230031I18Rik-201ENSMUST00000197856 3698 ntBASIC4.16□□□□□ -1.74
Trim3Q9R1R2 Nlrp4e-201ENSMUST00000076470 3382 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
Trim3Q9R1R2 Olfr172-202ENSMUST00000214139 1778 ntAPPRIS P1 TSL 5 BASIC4.16□□□□□ -1.74
Trim3Q9R1R2 Fgf7-202ENSMUST00000110442 2287 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
Trim3Q9R1R2 Fbxw28-204ENSMUST00000200156 1330 ntAPPRIS ALT2 TSL 1 (best) BASIC4.16□□□□□ -1.74
Trim3Q9R1R2 AC154548.1-201ENSMUST00000225844 3838 ntBASIC4.16□□□□□ -1.74
Trim3Q9R1R2 Zfp101-204ENSMUST00000174512 3743 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
Trim3Q9R1R2 Cntn6-201ENSMUST00000089215 3702 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
Trim3Q9R1R2 Gm43443-201ENSMUST00000202337 2393 ntBASIC4.16□□□□□ -1.74
Trim3Q9R1R2 Gm7754-201ENSMUST00000223075 2064 ntBASIC4.15□□□□□ -1.74
Trim3Q9R1R2 Gm38010-201ENSMUST00000192592 2784 ntBASIC4.15□□□□□ -1.74
Trim3Q9R1R2 Olfr1353-203ENSMUST00000205193 1924 ntAPPRIS P1 TSL 5 BASIC4.15□□□□□ -1.74
Trim3Q9R1R2 Gm44542-201ENSMUST00000208677 4314 ntBASIC4.15□□□□□ -1.74
Trim3Q9R1R2 0610010F05Rik-202ENSMUST00000093267 3646 ntAPPRIS ALT2 TSL 5 BASIC4.15□□□□□ -1.75
Trim3Q9R1R2 Gm43844-201ENSMUST00000202926 5605 ntBASIC4.15□□□□□ -1.75
Trim3Q9R1R2 Gm22473-201ENSMUST00000104114 132 ntBASIC4.15□□□□□ -1.75
Trim3Q9R1R2 Znrd1-201ENSMUST00000113669 742 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
Trim3Q9R1R2 Gm14304-201ENSMUST00000117272 446 ntBASIC4.15□□□□□ -1.75
Trim3Q9R1R2 Gm649-201ENSMUST00000117284 1054 ntBASIC4.15□□□□□ -1.75
Trim3Q9R1R2 Gm15752-201ENSMUST00000117427 394 ntBASIC4.15□□□□□ -1.75
Trim3Q9R1R2 Gm11905-201ENSMUST00000117653 678 ntBASIC4.15□□□□□ -1.75
Trim3Q9R1R2 Gm12387-201ENSMUST00000118573 955 ntBASIC4.15□□□□□ -1.75
Trim3Q9R1R2 4930412F09Rik-201ENSMUST00000139006 1017 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
Trim3Q9R1R2 Gm15338-201ENSMUST00000151884 552 ntTSL 3 BASIC4.15□□□□□ -1.75
Trim3Q9R1R2 Gm25271-201ENSMUST00000157273 290 ntBASIC4.15□□□□□ -1.75
Trim3Q9R1R2 Snrpe-201ENSMUST00000164096 669 ntTSL 2 BASIC4.15□□□□□ -1.75
Trim3Q9R1R2 A630095N17Rik-202ENSMUST00000180101 571 ntAPPRIS P4 TSL 3 BASIC4.15□□□□□ -1.75
Retrieved 100 of 76,532 protein–RNA pairs in 64.6 ms