Protein–RNA interactions for Protein: Q9JKE2

Trem1, Triggering receptor expressed on myeloid cells 1, mousemouse

Predictions only

Length 230 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trem1Q9JKE2 Cdh7-201ENSMUST00000027542 3390 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
Trem1Q9JKE2 Gm38253-201ENSMUST00000194058 4678 ntBASIC3.97□□□□□ -1.77
Trem1Q9JKE2 BC002059-202ENSMUST00000190415 1964 ntTSL 2 BASIC3.96□□□□□ -1.77
Trem1Q9JKE2 Olfr1274-ps-202ENSMUST00000216111 3395 ntAPPRIS P1 TSL 5 BASIC3.96□□□□□ -1.78
Trem1Q9JKE2 Gm42481-201ENSMUST00000196822 2178 ntBASIC3.96□□□□□ -1.78
Trem1Q9JKE2 Gm19744-204ENSMUST00000188936 4533 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
Trem1Q9JKE2 Gm24715-201ENSMUST00000102377 95 ntBASIC3.96□□□□□ -1.78
Trem1Q9JKE2 Gm3020-201ENSMUST00000112801 450 ntTSL 5 BASIC3.96□□□□□ -1.78
Trem1Q9JKE2 Olfr133-201ENSMUST00000113636 1090 ntAPPRIS P1 BASIC3.96□□□□□ -1.78
Trem1Q9JKE2 Gm11625-201ENSMUST00000119535 296 ntBASIC3.96□□□□□ -1.78
Trem1Q9JKE2 Smt3h2-ps4-201ENSMUST00000121569 288 ntBASIC3.96□□□□□ -1.78
Trem1Q9JKE2 Gm12893-201ENSMUST00000121732 275 ntBASIC3.96□□□□□ -1.78
Trem1Q9JKE2 Gm5401-201ENSMUST00000122444 365 ntBASIC3.96□□□□□ -1.78
Trem1Q9JKE2 Gm13483-201ENSMUST00000123699 664 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
Trem1Q9JKE2 1700003G18Rik-202ENSMUST00000150518 312 ntTSL 3 BASIC3.96□□□□□ -1.78
Trem1Q9JKE2 Gm14330-201ENSMUST00000155455 455 ntTSL 5 BASIC3.96□□□□□ -1.78
Trem1Q9JKE2 4930445N08Rik-201ENSMUST00000156925 313 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
Trem1Q9JKE2 Gm16243-201ENSMUST00000160351 494 ntTSL 3 BASIC3.96□□□□□ -1.78
Trem1Q9JKE2 Vmn1r-ps14-201ENSMUST00000176859 913 ntBASIC3.96□□□□□ -1.78
Trem1Q9JKE2 Gm27202-201ENSMUST00000183838 512 ntTSL 5 BASIC3.96□□□□□ -1.78
Trem1Q9JKE2 Gm28385-201ENSMUST00000185671 292 ntBASIC3.96□□□□□ -1.78
Trem1Q9JKE2 Gm5372-201ENSMUST00000187540 409 ntBASIC3.96□□□□□ -1.78
Trem1Q9JKE2 Gm36971-201ENSMUST00000195244 378 ntTSL 5 BASIC3.96□□□□□ -1.78
Trem1Q9JKE2 Gm18985-201ENSMUST00000196472 1079 ntBASIC3.96□□□□□ -1.78
Trem1Q9JKE2 Gm38509-201ENSMUST00000197492 1150 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
Trem1Q9JKE2 Gm44389-201ENSMUST00000203795 182 ntBASIC3.96□□□□□ -1.78
Trem1Q9JKE2 1700110I07Rik-201ENSMUST00000205487 726 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
Trem1Q9JKE2 Gm44703-201ENSMUST00000205724 248 ntBASIC3.96□□□□□ -1.78
Trem1Q9JKE2 Gm45034-201ENSMUST00000206831 482 ntBASIC3.96□□□□□ -1.78
Trem1Q9JKE2 Gm44543-201ENSMUST00000209136 396 ntBASIC3.96□□□□□ -1.78
Trem1Q9JKE2 Gm45523-201ENSMUST00000210712 799 ntBASIC3.96□□□□□ -1.78
Trem1Q9JKE2 Olfr1266-ps1-201ENSMUST00000214850 180 ntBASIC3.96□□□□□ -1.78
Trem1Q9JKE2 H60c-203ENSMUST00000216211 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC3.96□□□□□ -1.78
Trem1Q9JKE2 Gm18891-201ENSMUST00000216734 1087 ntBASIC3.96□□□□□ -1.78
Trem1Q9JKE2 Gm7530-201ENSMUST00000218466 605 ntBASIC3.96□□□□□ -1.78
Trem1Q9JKE2 4930543I11Rik-201ENSMUST00000219006 959 ntBASIC3.96□□□□□ -1.78
Trem1Q9JKE2 AC164629.3-201ENSMUST00000219325 611 ntTSL 5 BASIC3.96□□□□□ -1.78
Trem1Q9JKE2 Gm10037-202ENSMUST00000221266 549 ntAPPRIS P5 TSL 2 BASIC3.96□□□□□ -1.78
Trem1Q9JKE2 AC164164.2-201ENSMUST00000221809 785 ntBASIC3.96□□□□□ -1.78
Trem1Q9JKE2 AC174797.2-203ENSMUST00000224017 716 ntBASIC3.96□□□□□ -1.78
Trem1Q9JKE2 Gm6863-201ENSMUST00000052882 636 ntBASIC3.96□□□□□ -1.78
Trem1Q9JKE2 Olfr1022-201ENSMUST00000054736 948 ntAPPRIS P1 BASIC3.96□□□□□ -1.78
Trem1Q9JKE2 Olfr209-201ENSMUST00000055868 918 ntAPPRIS P1 BASIC3.96□□□□□ -1.78
Trem1Q9JKE2 Olfr1124-201ENSMUST00000062494 957 ntAPPRIS P1 BASIC3.96□□□□□ -1.78
Trem1Q9JKE2 Olfr1369-ps1-201ENSMUST00000079050 954 ntAPPRIS P1 BASIC3.96□□□□□ -1.78
Trem1Q9JKE2 Gm23455-201ENSMUST00000083331 100 ntBASIC3.96□□□□□ -1.78
Trem1Q9JKE2 Ceacam11-201ENSMUST00000094799 1054 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
Trem1Q9JKE2 Olfr599-201ENSMUST00000098201 1050 ntAPPRIS P1 BASIC3.96□□□□□ -1.78
Trem1Q9JKE2 Olfr1208-201ENSMUST00000099810 1075 ntAPPRIS P1 BASIC3.96□□□□□ -1.78
Trem1Q9JKE2 Olfr1046-201ENSMUST00000099902 951 ntAPPRIS P1 BASIC3.96□□□□□ -1.78
Trem1Q9JKE2 Cbll1-204ENSMUST00000185739 3945 ntAPPRIS ALT1 TSL 1 (best) BASIC3.96□□□□□ -1.78
Trem1Q9JKE2 Senp8-201ENSMUST00000051039 3682 ntAPPRIS P3 TSL 1 (best) BASIC3.96□□□□□ -1.78
Trem1Q9JKE2 Olfr715-202ENSMUST00000214919 5114 ntAPPRIS P1 TSL 5 BASIC3.96□□□□□ -1.78
Trem1Q9JKE2 Olfr247-202ENSMUST00000215871 1983 ntAPPRIS P5 TSL 5 BASIC3.96□□□□□ -1.78
Trem1Q9JKE2 0610010F05Rik-202ENSMUST00000093267 3646 ntAPPRIS ALT2 TSL 5 BASIC3.96□□□□□ -1.78
Trem1Q9JKE2 Zfp329-202ENSMUST00000108546 2577 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
Trem1Q9JKE2 Olfr112-205ENSMUST00000213274 3558 ntAPPRIS P1 TSL 5 BASIC3.96□□□□□ -1.78
Trem1Q9JKE2 Gm10727-201ENSMUST00000197107 1602 ntBASIC3.95□□□□□ -1.78
Trem1Q9JKE2 Erbb4-201ENSMUST00000119142 11782 ntAPPRIS ALT1 TSL 5 BASIC3.95□□□□□ -1.78
Trem1Q9JKE2 9430025C20Rik-201ENSMUST00000068663 2115 ntBASIC3.95□□□□□ -1.78
Trem1Q9JKE2 Ghr-208ENSMUST00000161561 2749 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
Trem1Q9JKE2 Gm36969-201ENSMUST00000194551 2809 ntBASIC3.95□□□□□ -1.78
Trem1Q9JKE2 Dach2-202ENSMUST00000113378 2089 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
Trem1Q9JKE2 Gm37879-201ENSMUST00000193112 1995 ntBASIC3.95□□□□□ -1.78
Trem1Q9JKE2 Gm43844-201ENSMUST00000202926 5605 ntBASIC3.95□□□□□ -1.78
Trem1Q9JKE2 Vmn1r71-205ENSMUST00000227940 4725 ntAPPRIS P2 BASIC3.95□□□□□ -1.78
Trem1Q9JKE2 Igkv10-94-201ENSMUST00000103330 347 ntAPPRIS P1 BASIC3.95□□□□□ -1.78
Trem1Q9JKE2 Trav2-201ENSMUST00000103568 325 ntAPPRIS ALT2 BASIC3.95□□□□□ -1.78
Trem1Q9JKE2 Gm25418-201ENSMUST00000104214 129 ntBASIC3.95□□□□□ -1.78
Trem1Q9JKE2 Mir105-201ENSMUST00000104655 80 ntBASIC3.95□□□□□ -1.78
Trem1Q9JKE2 Cldn34d-201ENSMUST00000114054 1003 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
Trem1Q9JKE2 Gm14871-201ENSMUST00000119056 194 ntBASIC3.95□□□□□ -1.78
Trem1Q9JKE2 Gm15745-201ENSMUST00000119807 115 ntBASIC3.95□□□□□ -1.78
Trem1Q9JKE2 Gm11805-201ENSMUST00000121238 600 ntBASIC3.95□□□□□ -1.78
Trem1Q9JKE2 Gtsf1-205ENSMUST00000141364 700 ntAPPRIS P1 TSL 5 BASIC3.95□□□□□ -1.78
Trem1Q9JKE2 Gm13923-201ENSMUST00000153283 288 ntTSL 3 BASIC3.95□□□□□ -1.78
Trem1Q9JKE2 Gm13617-201ENSMUST00000155350 675 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
Trem1Q9JKE2 Gm26169-201ENSMUST00000158420 135 ntBASIC3.95□□□□□ -1.78
Trem1Q9JKE2 Gm16557-201ENSMUST00000159182 191 ntBASIC3.95□□□□□ -1.78
Trem1Q9JKE2 Gm9017-201ENSMUST00000159613 676 ntTSL 2 BASIC3.95□□□□□ -1.78
Trem1Q9JKE2 Gm17075-201ENSMUST00000171924 670 ntBASIC3.95□□□□□ -1.78
Trem1Q9JKE2 Gm8321-201ENSMUST00000181691 980 ntBASIC3.95□□□□□ -1.78
Trem1Q9JKE2 Gm28429-201ENSMUST00000188521 363 ntBASIC3.95□□□□□ -1.78
Trem1Q9JKE2 1700111N16Rik-201ENSMUST00000188663 1133 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
Trem1Q9JKE2 Gm20812-202ENSMUST00000189550 1230 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
Trem1Q9JKE2 Gm38131-201ENSMUST00000192449 430 ntBASIC3.95□□□□□ -1.78
Trem1Q9JKE2 Gm38097-201ENSMUST00000192936 439 ntBASIC3.95□□□□□ -1.78
Trem1Q9JKE2 Gm38332-201ENSMUST00000194189 147 ntBASIC3.95□□□□□ -1.78
Trem1Q9JKE2 Gm17967-201ENSMUST00000195319 647 ntBASIC3.95□□□□□ -1.78
Trem1Q9JKE2 Gm43765-201ENSMUST00000196303 893 ntBASIC3.95□□□□□ -1.78
Trem1Q9JKE2 2310002D06Rik-201ENSMUST00000218103 508 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
Trem1Q9JKE2 AC121286.1-201ENSMUST00000218811 380 ntTSL 3 BASIC3.95□□□□□ -1.78
Trem1Q9JKE2 Il9-201ENSMUST00000022019 536 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
Trem1Q9JKE2 AC129219.3-201ENSMUST00000223790 196 ntBASIC3.95□□□□□ -1.78
Trem1Q9JKE2 Ear-ps9-202ENSMUST00000226796 245 ntBASIC3.95□□□□□ -1.78
Trem1Q9JKE2 Spink1-201ENSMUST00000025381 422 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
Trem1Q9JKE2 Olfr202-201ENSMUST00000049859 924 ntAPPRIS P1 BASIC3.95□□□□□ -1.78
Trem1Q9JKE2 Olfr1356-201ENSMUST00000061289 963 ntAPPRIS P1 BASIC3.95□□□□□ -1.78
Trem1Q9JKE2 Olfr787-201ENSMUST00000077836 939 ntAPPRIS P1 BASIC3.95□□□□□ -1.78
Trem1Q9JKE2 Vmn1r33-201ENSMUST00000079678 1036 ntAPPRIS P1 BASIC3.95□□□□□ -1.78
Retrieved 100 of 76,532 protein–RNA pairs in 73.3 ms