Protein–RNA interactions for Protein: Q9ERG0

Lima1, LIM domain and actin-binding protein 1, mousemouse

Known RBP Predictions only

Length 753 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lima1Q9ERG0 Bcl2a1a-201ENSMUST00000098485 819 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
Lima1Q9ERG0 Vmn2r30-202ENSMUST00000174368 3688 ntTSL 2 BASIC4.07□□□□□ -1.76
Lima1Q9ERG0 Gm37478-201ENSMUST00000193624 3495 ntBASIC4.07□□□□□ -1.76
Lima1Q9ERG0 Cubn-201ENSMUST00000091436 11262 ntAPPRIS P1 TSL 5 BASIC4.07□□□□□ -1.76
Lima1Q9ERG0 Zfp981-201ENSMUST00000105735 3038 ntAPPRIS P1 TSL 2 BASIC4.07□□□□□ -1.76
Lima1Q9ERG0 Olfr1369-ps1-203ENSMUST00000213922 3930 ntAPPRIS P1 TSL 5 BASIC4.07□□□□□ -1.76
Lima1Q9ERG0 Vmn2r31-201ENSMUST00000075108 3660 ntAPPRIS P1 TSL 5 BASIC4.07□□□□□ -1.76
Lima1Q9ERG0 Olfr1016-202ENSMUST00000216425 2698 ntAPPRIS P1 TSL 3 BASIC4.07□□□□□ -1.76
Lima1Q9ERG0 Glmn-203ENSMUST00000100949 1759 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
Lima1Q9ERG0 Olfr172-202ENSMUST00000214139 1778 ntAPPRIS P1 TSL 5 BASIC4.07□□□□□ -1.76
Lima1Q9ERG0 Ifi203-203ENSMUST00000123708 3482 ntAPPRIS P3 TSL 1 (best) BASIC4.07□□□□□ -1.76
Lima1Q9ERG0 Olfr1196-203ENSMUST00000216977 4225 ntAPPRIS P1 TSL 5 BASIC4.06□□□□□ -1.76
Lima1Q9ERG0 Fam19a1-202ENSMUST00000122120 3252 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
Lima1Q9ERG0 Zfp708-201ENSMUST00000109742 2416 ntAPPRIS P2 TSL 1 (best) BASIC4.06□□□□□ -1.76
Lima1Q9ERG0 Gm38265-201ENSMUST00000193479 3766 ntBASIC4.06□□□□□ -1.76
Lima1Q9ERG0 Erbb4-201ENSMUST00000119142 11782 ntAPPRIS ALT1 TSL 5 BASIC4.06□□□□□ -1.76
Lima1Q9ERG0 Gm44525-201ENSMUST00000183129 2634 ntBASIC4.06□□□□□ -1.76
Lima1Q9ERG0 AC134596.1-201ENSMUST00000222016 1922 ntBASIC4.06□□□□□ -1.76
Lima1Q9ERG0 Smpx-202ENSMUST00000112520 503 ntAPPRIS P1 TSL 5 BASIC4.06□□□□□ -1.76
Lima1Q9ERG0 Gm13733-201ENSMUST00000117290 535 ntBASIC4.06□□□□□ -1.76
Lima1Q9ERG0 Gm14854-201ENSMUST00000117758 841 ntBASIC4.06□□□□□ -1.76
Lima1Q9ERG0 Gm14388-201ENSMUST00000118119 477 ntBASIC4.06□□□□□ -1.76
Lima1Q9ERG0 Gm15916-201ENSMUST00000118355 736 ntBASIC4.06□□□□□ -1.76
Lima1Q9ERG0 Gm12328-201ENSMUST00000118611 197 ntBASIC4.06□□□□□ -1.76
Lima1Q9ERG0 Gm14791-201ENSMUST00000119061 1166 ntBASIC4.06□□□□□ -1.76
Lima1Q9ERG0 Gm4912-201ENSMUST00000122212 1044 ntBASIC4.06□□□□□ -1.76
Lima1Q9ERG0 Gm10444-201ENSMUST00000126708 148 ntBASIC4.06□□□□□ -1.76
Lima1Q9ERG0 Olfr406-201ENSMUST00000133561 1101 ntAPPRIS P1 BASIC4.06□□□□□ -1.76
Lima1Q9ERG0 Gm23906-201ENSMUST00000157573 128 ntBASIC4.06□□□□□ -1.76
Lima1Q9ERG0 Gm24224-201ENSMUST00000158828 258 ntBASIC4.06□□□□□ -1.76
Lima1Q9ERG0 Gm3053-201ENSMUST00000161709 616 ntBASIC4.06□□□□□ -1.76
Lima1Q9ERG0 Gm17416-201ENSMUST00000163724 201 ntAPPRIS P1 BASIC4.06□□□□□ -1.76
Lima1Q9ERG0 Gm6245-201ENSMUST00000164699 768 ntBASIC4.06□□□□□ -1.76
Lima1Q9ERG0 Defa27-202ENSMUST00000168340 371 ntTSL 5 BASIC4.06□□□□□ -1.76
Lima1Q9ERG0 Mir3090-201ENSMUST00000175597 87 ntBASIC4.06□□□□□ -1.76
Lima1Q9ERG0 Esd-208ENSMUST00000177137 853 ntTSL 5 BASIC4.06□□□□□ -1.76
Lima1Q9ERG0 Mir6410-201ENSMUST00000184204 104 ntBASIC4.06□□□□□ -1.76
Lima1Q9ERG0 Gm43649-201ENSMUST00000196596 391 ntBASIC4.06□□□□□ -1.76
Lima1Q9ERG0 Gm31831-202ENSMUST00000198581 278 ntTSL 5 BASIC4.06□□□□□ -1.76
Lima1Q9ERG0 Zfp638-206ENSMUST00000203324 3822 ntAPPRIS ALT2 TSL 5 BASIC4.06□□□□□ -1.76
Lima1Q9ERG0 Gm45081-201ENSMUST00000206281 572 ntBASIC4.06□□□□□ -1.76
Lima1Q9ERG0 Gm45458-201ENSMUST00000209900 522 ntBASIC4.06□□□□□ -1.76
Lima1Q9ERG0 Gm46327-201ENSMUST00000218240 365 ntBASIC4.06□□□□□ -1.76
Lima1Q9ERG0 Gm19134-201ENSMUST00000221203 487 ntBASIC4.06□□□□□ -1.76
Lima1Q9ERG0 AC162934.1-201ENSMUST00000222880 309 ntBASIC4.06□□□□□ -1.76
Lima1Q9ERG0 AC129219.3-201ENSMUST00000223790 196 ntBASIC4.06□□□□□ -1.76
Lima1Q9ERG0 CT025536.1-201ENSMUST00000226744 844 ntBASIC4.06□□□□□ -1.76
Lima1Q9ERG0 Olfr476-201ENSMUST00000077249 933 ntAPPRIS P1 BASIC4.06□□□□□ -1.76
Lima1Q9ERG0 Snord21-201ENSMUST00000082519 94 ntBASIC4.06□□□□□ -1.76
Lima1Q9ERG0 Olfr876-201ENSMUST00000086064 1048 ntAPPRIS P1 BASIC4.06□□□□□ -1.76
Lima1Q9ERG0 Smim4-203ENSMUST00000090205 426 ntTSL 2 BASIC4.06□□□□□ -1.76
Lima1Q9ERG0 Defa-ps18-201ENSMUST00000098889 371 ntBASIC4.06□□□□□ -1.76
Lima1Q9ERG0 Olfr993-201ENSMUST00000099926 945 ntAPPRIS P1 BASIC4.06□□□□□ -1.76
Lima1Q9ERG0 Cd86-201ENSMUST00000089620 2539 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
Lima1Q9ERG0 Sorbs2-203ENSMUST00000124544 3798 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
Lima1Q9ERG0 Hdx-201ENSMUST00000038472 9385 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
Lima1Q9ERG0 Gm37916-201ENSMUST00000192153 2435 ntBASIC4.06□□□□□ -1.76
Lima1Q9ERG0 Fam46d-204ENSMUST00000167154 3004 ntAPPRIS P1 TSL 3 BASIC4.06□□□□□ -1.76
Lima1Q9ERG0 1810006J02Rik-201ENSMUST00000186473 1687 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
Lima1Q9ERG0 Vmn1r71-205ENSMUST00000227940 4725 ntAPPRIS P2 BASIC4.06□□□□□ -1.76
Lima1Q9ERG0 5930409G06Rik-201ENSMUST00000192347 1544 ntBASIC4.05□□□□□ -1.76
Lima1Q9ERG0 Olfr1205-202ENSMUST00000215929 6149 ntAPPRIS P1 TSL 3 BASIC4.05□□□□□ -1.76
Lima1Q9ERG0 Zfp873-201ENSMUST00000105313 1893 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
Lima1Q9ERG0 4930415L06Rik-201ENSMUST00000088146 2617 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
Lima1Q9ERG0 Gm43197-201ENSMUST00000201493 2583 ntBASIC4.05□□□□□ -1.76
Lima1Q9ERG0 Gm15385-201ENSMUST00000118725 667 ntBASIC4.05□□□□□ -1.76
Lima1Q9ERG0 Gm14916-201ENSMUST00000121904 204 ntBASIC4.05□□□□□ -1.76
Lima1Q9ERG0 Gm15517-201ENSMUST00000124863 251 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
Lima1Q9ERG0 Gm15338-201ENSMUST00000151884 552 ntTSL 3 BASIC4.05□□□□□ -1.76
Lima1Q9ERG0 Gm25966-201ENSMUST00000157169 117 ntBASIC4.05□□□□□ -1.76
Lima1Q9ERG0 Gm23743-201ENSMUST00000157389 274 ntBASIC4.05□□□□□ -1.76
Lima1Q9ERG0 Gm23585-201ENSMUST00000157656 102 ntBASIC4.05□□□□□ -1.76
Lima1Q9ERG0 Gm25665-201ENSMUST00000157695 110 ntBASIC4.05□□□□□ -1.76
Lima1Q9ERG0 Gm24939-201ENSMUST00000158325 137 ntBASIC4.05□□□□□ -1.76
Lima1Q9ERG0 Gm17109-201ENSMUST00000163985 358 ntBASIC4.05□□□□□ -1.76
Lima1Q9ERG0 Vmn1r181-201ENSMUST00000181796 1080 ntAPPRIS P1 BASIC4.05□□□□□ -1.76
Lima1Q9ERG0 4831440E17Rik-201ENSMUST00000181942 1028 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
Lima1Q9ERG0 Gm27564-201ENSMUST00000185196 96 ntBASIC4.05□□□□□ -1.76
Lima1Q9ERG0 Gm28709-201ENSMUST00000186967 456 ntTSL 5 BASIC4.05□□□□□ -1.76
Lima1Q9ERG0 Gm28612-201ENSMUST00000189214 416 ntTSL 5 BASIC4.05□□□□□ -1.76
Lima1Q9ERG0 2610001A08Rik-201ENSMUST00000193315 867 ntBASIC4.05□□□□□ -1.76
Lima1Q9ERG0 Gm45228-201ENSMUST00000206585 352 ntBASIC4.05□□□□□ -1.76
Lima1Q9ERG0 Gm45317-201ENSMUST00000210385 223 ntBASIC4.05□□□□□ -1.76
Lima1Q9ERG0 Gm18377-201ENSMUST00000215141 607 ntBASIC4.05□□□□□ -1.76
Lima1Q9ERG0 AC153932.1-201ENSMUST00000218558 787 ntBASIC4.05□□□□□ -1.76
Lima1Q9ERG0 4930442G10Rik-202ENSMUST00000221968 1096 ntTSL 5 BASIC4.05□□□□□ -1.76
Lima1Q9ERG0 AC163721.1-201ENSMUST00000222669 394 ntTSL 3 BASIC4.05□□□□□ -1.76
Lima1Q9ERG0 AC131747.1-201ENSMUST00000226159 793 ntBASIC4.05□□□□□ -1.76
Lima1Q9ERG0 n-R5s151-201ENSMUST00000083959 119 ntBASIC4.05□□□□□ -1.76
Lima1Q9ERG0 Gm6361-201ENSMUST00000091031 435 ntBASIC4.05□□□□□ -1.76
Lima1Q9ERG0 A230081H15Rik-201ENSMUST00000218326 2929 ntBASIC4.05□□□□□ -1.76
Lima1Q9ERG0 Gm44435-201ENSMUST00000204379 4119 ntBASIC4.05□□□□□ -1.76
Lima1Q9ERG0 Gm45093-201ENSMUST00000206859 2463 ntBASIC4.05□□□□□ -1.76
Lima1Q9ERG0 Olfr810-202ENSMUST00000214206 4809 ntAPPRIS P1 TSL 5 BASIC4.05□□□□□ -1.76
Lima1Q9ERG0 A230085B16Rik-201ENSMUST00000209781 1856 ntBASIC4.05□□□□□ -1.76
Lima1Q9ERG0 Gpr34-202ENSMUST00000096492 1898 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
Lima1Q9ERG0 AY358078-201ENSMUST00000053821 1461 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
Lima1Q9ERG0 Vmn1r62-201ENSMUST00000173956 1757 ntAPPRIS P1 BASIC4.04□□□□□ -1.76
Lima1Q9ERG0 Obox4-ps27-201ENSMUST00000179203 1362 ntBASIC4.04□□□□□ -1.76
Lima1Q9ERG0 Obox4-ps12-201ENSMUST00000180084 1362 ntBASIC4.04□□□□□ -1.76
Retrieved 100 of 76,532 protein–RNA pairs in 88.3 ms