Protein–RNA interactions for Protein: Q9DC48

Cdc40, Pre-mRNA-processing factor 17, mousemouse

Known RBP Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdc40Q9DC48 Gm7834-201ENSMUST00000117560 437 ntBASIC4.04□□□□□ -1.76
Cdc40Q9DC48 Gm15385-201ENSMUST00000118725 667 ntBASIC4.04□□□□□ -1.76
Cdc40Q9DC48 Gm9308-201ENSMUST00000119073 448 ntBASIC4.04□□□□□ -1.76
Cdc40Q9DC48 Olfr1081-ps1-201ENSMUST00000120210 945 ntBASIC4.04□□□□□ -1.76
Cdc40Q9DC48 Gm11448-201ENSMUST00000120427 450 ntBASIC4.04□□□□□ -1.76
Cdc40Q9DC48 Gm6062-201ENSMUST00000120462 631 ntBASIC4.04□□□□□ -1.76
Cdc40Q9DC48 Rpl12-ps2-201ENSMUST00000121298 321 ntBASIC4.04□□□□□ -1.76
Cdc40Q9DC48 Gm11234-201ENSMUST00000141030 845 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
Cdc40Q9DC48 Gm5963-201ENSMUST00000143451 236 ntBASIC4.04□□□□□ -1.76
Cdc40Q9DC48 Gm23958-201ENSMUST00000157207 105 ntBASIC4.04□□□□□ -1.76
Cdc40Q9DC48 Gm1992-201ENSMUST00000161581 250 ntTSL 3 BASIC4.04□□□□□ -1.76
Cdc40Q9DC48 Gm17091-201ENSMUST00000163248 357 ntBASIC4.04□□□□□ -1.76
Cdc40Q9DC48 Gm17133-201ENSMUST00000170636 289 ntTSL 3 BASIC4.04□□□□□ -1.76
Cdc40Q9DC48 Vmn1r139-202ENSMUST00000173668 753 ntTSL 3 BASIC4.04□□□□□ -1.76
Cdc40Q9DC48 Gm8890-202ENSMUST00000177727 465 ntAPPRIS ALT2 TSL 5 BASIC4.04□□□□□ -1.76
Cdc40Q9DC48 Gm21820-201ENSMUST00000179056 1083 ntAPPRIS P1 BASIC4.04□□□□□ -1.76
Cdc40Q9DC48 Gm27940-201ENSMUST00000184449 98 ntBASIC4.04□□□□□ -1.76
Cdc40Q9DC48 Mir3620-201ENSMUST00000184710 61 ntBASIC4.04□□□□□ -1.76
Cdc40Q9DC48 Gm37934-201ENSMUST00000192902 402 ntBASIC4.04□□□□□ -1.76
Cdc40Q9DC48 Gm38334-201ENSMUST00000195060 313 ntBASIC4.04□□□□□ -1.76
Cdc40Q9DC48 Gm38008-201ENSMUST00000195333 518 ntBASIC4.04□□□□□ -1.76
Cdc40Q9DC48 Gm18445-201ENSMUST00000195502 774 ntBASIC4.04□□□□□ -1.76
Cdc40Q9DC48 Hcfc1r1-ps2-201ENSMUST00000199379 339 ntBASIC4.04□□□□□ -1.76
Cdc40Q9DC48 Gm44650-201ENSMUST00000206929 194 ntBASIC4.04□□□□□ -1.76
Cdc40Q9DC48 Gm20074-201ENSMUST00000208144 484 ntBASIC4.04□□□□□ -1.76
Cdc40Q9DC48 Gm18320-201ENSMUST00000211304 595 ntBASIC4.04□□□□□ -1.76
Cdc40Q9DC48 AC156639.1-201ENSMUST00000216503 660 ntTSL 3 BASIC4.04□□□□□ -1.76
Cdc40Q9DC48 AC140930.4-201ENSMUST00000220750 150 ntBASIC4.04□□□□□ -1.76
Cdc40Q9DC48 CR974429.1-201ENSMUST00000220877 827 ntBASIC4.04□□□□□ -1.76
Cdc40Q9DC48 AL606513.1-201ENSMUST00000225369 579 ntBASIC4.04□□□□□ -1.76
Cdc40Q9DC48 Olfr845-201ENSMUST00000071259 942 ntAPPRIS P1 BASIC4.04□□□□□ -1.76
Cdc40Q9DC48 Olfr1202-201ENSMUST00000072057 930 ntAPPRIS P1 BASIC4.04□□□□□ -1.76
Cdc40Q9DC48 Gm23407-201ENSMUST00000082538 91 ntBASIC4.04□□□□□ -1.76
Cdc40Q9DC48 Gm32061-201ENSMUST00000207232 3478 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
Cdc40Q9DC48 Gm26522-201ENSMUST00000181565 1555 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
Cdc40Q9DC48 AC158605.2-201ENSMUST00000220287 2726 ntAPPRIS P1 TSL 2 BASIC4.04□□□□□ -1.76
Cdc40Q9DC48 Nebl-206ENSMUST00000131957 1709 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
Cdc40Q9DC48 Gm16892-201ENSMUST00000180999 1726 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
Cdc40Q9DC48 1700017N19Rik-204ENSMUST00000188736 1709 ntTSL 5 BASIC4.04□□□□□ -1.76
Cdc40Q9DC48 Olfr1197-202ENSMUST00000213118 2899 ntAPPRIS P1 TSL 5 BASIC4.04□□□□□ -1.76
Cdc40Q9DC48 Neb-202ENSMUST00000036934 22489 ntAPPRIS P2 TSL 5 BASIC4.04□□□□□ -1.76
Cdc40Q9DC48 Gm45160-201ENSMUST00000207112 3099 ntBASIC4.03□□□□□ -1.76
Cdc40Q9DC48 Slfn10-ps-201ENSMUST00000100716 3621 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
Cdc40Q9DC48 Olfr1263-204ENSMUST00000217065 4186 ntAPPRIS P1 TSL 5 BASIC4.03□□□□□ -1.76
Cdc40Q9DC48 Olfr1472-202ENSMUST00000096201 1377 ntAPPRIS P1 TSL 5 BASIC4.03□□□□□ -1.76
Cdc40Q9DC48 March1-202ENSMUST00000072482 3953 ntTSL 5 BASIC4.03□□□□□ -1.76
Cdc40Q9DC48 Cdh10-201ENSMUST00000040562 3407 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
Cdc40Q9DC48 Gm23481-201ENSMUST00000104173 131 ntBASIC4.03□□□□□ -1.76
Cdc40Q9DC48 Gm6461-201ENSMUST00000120015 633 ntBASIC4.03□□□□□ -1.76
Cdc40Q9DC48 Gm12724-201ENSMUST00000140196 665 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
Cdc40Q9DC48 Ugt2a2-202ENSMUST00000144144 929 ntTSL 2 BASIC4.03□□□□□ -1.76
Cdc40Q9DC48 Myhas-202ENSMUST00000145021 950 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
Cdc40Q9DC48 Gm16084-201ENSMUST00000148122 620 ntTSL 3 BASIC4.03□□□□□ -1.76
Cdc40Q9DC48 Vmn1r174-201ENSMUST00000167551 942 ntAPPRIS P1 BASIC4.03□□□□□ -1.76
Cdc40Q9DC48 Gm1979-202ENSMUST00000170224 666 ntTSL 5 BASIC4.03□□□□□ -1.76
Cdc40Q9DC48 Vmn1r173-201ENSMUST00000174055 942 ntAPPRIS P1 BASIC4.03□□□□□ -1.76
Cdc40Q9DC48 Gm21698-201ENSMUST00000178487 666 ntTSL 5 BASIC4.03□□□□□ -1.76
Cdc40Q9DC48 4930461G14Rik-201ENSMUST00000181967 843 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
Cdc40Q9DC48 Gm27976-201ENSMUST00000183635 162 ntBASIC4.03□□□□□ -1.76
Cdc40Q9DC48 Gm27883-201ENSMUST00000183941 102 ntBASIC4.03□□□□□ -1.76
Cdc40Q9DC48 Gm28935-201ENSMUST00000185737 568 ntTSL 2 BASIC4.03□□□□□ -1.76
Cdc40Q9DC48 Gm4854-201ENSMUST00000185902 574 ntBASIC4.03□□□□□ -1.76
Cdc40Q9DC48 Gm6802-202ENSMUST00000186566 126 ntBASIC4.03□□□□□ -1.76
Cdc40Q9DC48 Gm17916-202ENSMUST00000187634 1187 ntBASIC4.03□□□□□ -1.76
Cdc40Q9DC48 Gm28625-201ENSMUST00000188309 205 ntBASIC4.03□□□□□ -1.76
Cdc40Q9DC48 Gm29133-201ENSMUST00000189155 885 ntAPPRIS P1 TSL 5 BASIC4.03□□□□□ -1.76
Cdc40Q9DC48 Gm17777-201ENSMUST00000189740 1276 ntBASIC4.03□□□□□ -1.76
Cdc40Q9DC48 2900037B21Rik-201ENSMUST00000194352 337 ntBASIC4.03□□□□□ -1.76
Cdc40Q9DC48 Gm36954-201ENSMUST00000195362 363 ntBASIC4.03□□□□□ -1.76
Cdc40Q9DC48 Csn1s2a-202ENSMUST00000196585 762 ntAPPRIS ALT2 TSL 3 BASIC4.03□□□□□ -1.76
Cdc40Q9DC48 Olfr202-202ENSMUST00000201687 1232 ntAPPRIS P1 TSL 5 BASIC4.03□□□□□ -1.76
Cdc40Q9DC48 Gm43580-201ENSMUST00000202892 284 ntBASIC4.03□□□□□ -1.76
Cdc40Q9DC48 Gm45458-201ENSMUST00000209900 522 ntBASIC4.03□□□□□ -1.76
Cdc40Q9DC48 Gm5339-201ENSMUST00000210551 1102 ntBASIC4.03□□□□□ -1.76
Cdc40Q9DC48 AC174776.1-201ENSMUST00000221509 405 ntBASIC4.03□□□□□ -1.76
Cdc40Q9DC48 AC174776.2-201ENSMUST00000222561 405 ntBASIC4.03□□□□□ -1.76
Cdc40Q9DC48 AC154305.1-201ENSMUST00000224443 450 ntBASIC4.03□□□□□ -1.76
Cdc40Q9DC48 AC154239.2-201ENSMUST00000227859 233 ntBASIC4.03□□□□□ -1.76
Cdc40Q9DC48 Gm5689-201ENSMUST00000041389 294 ntAPPRIS P1 BASIC4.03□□□□□ -1.76
Cdc40Q9DC48 Olfr906-201ENSMUST00000045493 936 ntAPPRIS P1 BASIC4.03□□□□□ -1.76
Cdc40Q9DC48 Csn1s2a-201ENSMUST00000076379 920 ntAPPRIS P3 TSL 1 (best) BASIC4.03□□□□□ -1.76
Cdc40Q9DC48 Prl3d2-201ENSMUST00000080755 853 ntAPPRIS P2 TSL 5 BASIC4.03□□□□□ -1.76
Cdc40Q9DC48 Cd59b-201ENSMUST00000090429 796 ntAPPRIS P1 TSL 5 BASIC4.03□□□□□ -1.76
Cdc40Q9DC48 Gm17752-201ENSMUST00000185787 3726 ntBASIC4.03□□□□□ -1.76
Cdc40Q9DC48 Olfr955-203ENSMUST00000220176 1452 ntAPPRIS P1 TSL 5 BASIC4.03□□□□□ -1.76
Cdc40Q9DC48 AY358078-201ENSMUST00000053821 1461 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
Cdc40Q9DC48 Gm45137-201ENSMUST00000208652 4415 ntBASIC4.03□□□□□ -1.77
Cdc40Q9DC48 Gm6205-202ENSMUST00000190001 2515 ntAPPRIS P1 TSL 5 BASIC4.02□□□□□ -1.77
Cdc40Q9DC48 Cdh7-209ENSMUST00000172005 3353 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
Cdc40Q9DC48 Gm3665-201ENSMUST00000177214 2461 ntBASIC4.02□□□□□ -1.77
Cdc40Q9DC48 Vmn2r-ps51-201ENSMUST00000177271 2461 ntBASIC4.02□□□□□ -1.77
Cdc40Q9DC48 Jpx-201ENSMUST00000181020 3802 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
Cdc40Q9DC48 Gm27162-201ENSMUST00000185169 2478 ntTSL 2 BASIC4.02□□□□□ -1.77
Cdc40Q9DC48 CAAA01194877.1-201ENSMUST00000213137 4233 ntBASIC4.02□□□□□ -1.77
Cdc40Q9DC48 1700097M23Rik-201ENSMUST00000204079 1522 ntBASIC4.02□□□□□ -1.77
Cdc40Q9DC48 Polk-202ENSMUST00000091387 2382 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
Cdc40Q9DC48 Adam34-201ENSMUST00000110411 2584 ntAPPRIS P1 TSL 5 BASIC4.02□□□□□ -1.77
Cdc40Q9DC48 Olfr1270-202ENSMUST00000213946 4930 ntAPPRIS P1 TSL 5 BASIC4.02□□□□□ -1.77
Cdc40Q9DC48 Igkv4-61-201ENSMUST00000103353 284 ntAPPRIS P1 BASIC4.02□□□□□ -1.77
Cdc40Q9DC48 Gm15058-201ENSMUST00000117689 458 ntBASIC4.02□□□□□ -1.77
Retrieved 100 of 76,532 protein–RNA pairs in 83.2 ms