Protein–RNA interactions for Protein: Q9D6Y1

Ccdc3, Coiled-coil domain-containing protein 3, mousemouse

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc3Q9D6Y1 Gm43974-201ENSMUST00000205080 684 ntBASIC4.13□□□□□ -1.75
Ccdc3Q9D6Y1 Gm44002-201ENSMUST00000205134 594 ntBASIC4.13□□□□□ -1.75
Ccdc3Q9D6Y1 Gm45498-201ENSMUST00000210346 283 ntBASIC4.13□□□□□ -1.75
Ccdc3Q9D6Y1 AC156504.1-201ENSMUST00000214608 157 ntBASIC4.13□□□□□ -1.75
Ccdc3Q9D6Y1 AC153516.1-201ENSMUST00000217955 779 ntBASIC4.13□□□□□ -1.75
Ccdc3Q9D6Y1 AC140344.1-201ENSMUST00000223384 387 ntBASIC4.13□□□□□ -1.75
Ccdc3Q9D6Y1 Gm46401-202ENSMUST00000223425 803 ntTSL 5 BASIC4.13□□□□□ -1.75
Ccdc3Q9D6Y1 AC102603.1-201ENSMUST00000227481 584 ntBASIC4.13□□□□□ -1.75
Ccdc3Q9D6Y1 Olfr1253-201ENSMUST00000099765 957 ntAPPRIS P1 BASIC4.13□□□□□ -1.75
Ccdc3Q9D6Y1 Gm8744-201ENSMUST00000204475 3581 ntBASIC4.13□□□□□ -1.75
Ccdc3Q9D6Y1 Gm7173-201ENSMUST00000101410 2832 ntAPPRIS P4 TSL 5 BASIC4.13□□□□□ -1.75
Ccdc3Q9D6Y1 Vmn1r32-201ENSMUST00000079584 2833 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
Ccdc3Q9D6Y1 Svet1-201ENSMUST00000209370 3940 ntBASIC4.13□□□□□ -1.75
Ccdc3Q9D6Y1 Gm13630-201ENSMUST00000127849 3650 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
Ccdc3Q9D6Y1 Gm37936-201ENSMUST00000194647 1322 ntBASIC4.13□□□□□ -1.75
Ccdc3Q9D6Y1 Gm43781-201ENSMUST00000197634 2681 ntBASIC4.13□□□□□ -1.75
Ccdc3Q9D6Y1 Cftr-203ENSMUST00000115406 4341 ntAPPRIS ALT2 TSL 5 BASIC4.13□□□□□ -1.75
Ccdc3Q9D6Y1 Olfr1082-201ENSMUST00000215600 1620 ntAPPRIS P1 TSL 3 BASIC4.13□□□□□ -1.75
Ccdc3Q9D6Y1 Gm37639-201ENSMUST00000191623 2785 ntBASIC4.13□□□□□ -1.75
Ccdc3Q9D6Y1 AC159476.1-201ENSMUST00000215914 1668 ntBASIC4.13□□□□□ -1.75
Ccdc3Q9D6Y1 Olfr570-202ENSMUST00000209778 1423 ntAPPRIS P1 TSL 5 BASIC4.12□□□□□ -1.75
Ccdc3Q9D6Y1 Olfr826-203ENSMUST00000216661 2858 ntAPPRIS P1 TSL 3 BASIC4.12□□□□□ -1.75
Ccdc3Q9D6Y1 Vmn1r174-202ENSMUST00000228331 9058 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
Ccdc3Q9D6Y1 Olfr672-202ENSMUST00000213942 1490 ntAPPRIS P1 TSL 3 BASIC4.12□□□□□ -1.75
Ccdc3Q9D6Y1 Lrp1b-201ENSMUST00000052550 16294 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
Ccdc3Q9D6Y1 AC153964.1-201ENSMUST00000219677 3142 ntBASIC4.12□□□□□ -1.75
Ccdc3Q9D6Y1 Gm43527-201ENSMUST00000198749 3178 ntBASIC4.12□□□□□ -1.75
Ccdc3Q9D6Y1 Traj12-201ENSMUST00000103729 58 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
Ccdc3Q9D6Y1 Gm11874-201ENSMUST00000117437 130 ntBASIC4.12□□□□□ -1.75
Ccdc3Q9D6Y1 Gm13755-201ENSMUST00000118509 305 ntBASIC4.12□□□□□ -1.75
Ccdc3Q9D6Y1 Gm12638-201ENSMUST00000119531 298 ntBASIC4.12□□□□□ -1.75
Ccdc3Q9D6Y1 Gm11931-201ENSMUST00000121630 447 ntBASIC4.12□□□□□ -1.75
Ccdc3Q9D6Y1 Gm15038-201ENSMUST00000122144 296 ntBASIC4.12□□□□□ -1.75
Ccdc3Q9D6Y1 Gm22986-201ENSMUST00000122753 130 ntBASIC4.12□□□□□ -1.75
Ccdc3Q9D6Y1 Gm15534-201ENSMUST00000137642 562 ntBASIC4.12□□□□□ -1.75
Ccdc3Q9D6Y1 1700080G11Rik-201ENSMUST00000156401 436 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
Ccdc3Q9D6Y1 Gm24503-201ENSMUST00000158454 135 ntBASIC4.12□□□□□ -1.75
Ccdc3Q9D6Y1 4930445B16Rik-201ENSMUST00000170085 1123 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
Ccdc3Q9D6Y1 Vmn1r-ps32-201ENSMUST00000174389 956 ntBASIC4.12□□□□□ -1.75
Ccdc3Q9D6Y1 Gm27036-201ENSMUST00000182465 980 ntBASIC4.12□□□□□ -1.75
Ccdc3Q9D6Y1 Gm28471-201ENSMUST00000185994 615 ntBASIC4.12□□□□□ -1.75
Ccdc3Q9D6Y1 1700027A15Rik-203ENSMUST00000188793 423 ntTSL 3 BASIC4.12□□□□□ -1.75
Ccdc3Q9D6Y1 Gm42539-201ENSMUST00000197009 308 ntBASIC4.12□□□□□ -1.75
Ccdc3Q9D6Y1 Gm42566-201ENSMUST00000197120 643 ntBASIC4.12□□□□□ -1.75
Ccdc3Q9D6Y1 Gm44376-201ENSMUST00000197570 128 ntBASIC4.12□□□□□ -1.75
Ccdc3Q9D6Y1 Kap-202ENSMUST00000203168 464 ntAPPRIS ALT2 TSL 3 BASIC4.12□□□□□ -1.75
Ccdc3Q9D6Y1 Gm44032-201ENSMUST00000204841 166 ntBASIC4.12□□□□□ -1.75
Ccdc3Q9D6Y1 Gm44174-201ENSMUST00000205022 141 ntTSL 2 BASIC4.12□□□□□ -1.75
Ccdc3Q9D6Y1 Olfr663-201ENSMUST00000209914 959 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
Ccdc3Q9D6Y1 Gm45539-201ENSMUST00000210313 428 ntBASIC4.12□□□□□ -1.75
Ccdc3Q9D6Y1 AC153361.2-203ENSMUST00000218083 661 ntTSL 3 BASIC4.12□□□□□ -1.75
Ccdc3Q9D6Y1 Prl3d3-202ENSMUST00000223958 675 ntAPPRIS ALT2 BASIC4.12□□□□□ -1.75
Ccdc3Q9D6Y1 Olfr1408-201ENSMUST00000073663 1037 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
Ccdc3Q9D6Y1 Olfr971-201ENSMUST00000075467 924 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
Ccdc3Q9D6Y1 Olfr846-201ENSMUST00000078774 942 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
Ccdc3Q9D6Y1 Rpl36a-ps1-201ENSMUST00000081987 449 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
Ccdc3Q9D6Y1 Olfr259-201ENSMUST00000099862 939 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
Ccdc3Q9D6Y1 Vmn2r93-201ENSMUST00000079206 2574 ntAPPRIS P1 TSL 5 BASIC4.12□□□□□ -1.75
Ccdc3Q9D6Y1 B830012L14Rik-201ENSMUST00000182785 4505 ntTSL 5 BASIC4.12□□□□□ -1.75
Ccdc3Q9D6Y1 Gm43319-201ENSMUST00000198036 2270 ntBASIC4.12□□□□□ -1.75
Ccdc3Q9D6Y1 Eya4-208ENSMUST00000220299 3615 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
Ccdc3Q9D6Y1 Olfr406-203ENSMUST00000217016 2651 ntAPPRIS P1 TSL 5 BASIC4.12□□□□□ -1.75
Ccdc3Q9D6Y1 Vmn1r195-202ENSMUST00000228711 3056 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
Ccdc3Q9D6Y1 CAAA01194877.1-201ENSMUST00000213137 4233 ntBASIC4.12□□□□□ -1.75
Ccdc3Q9D6Y1 Slfn8-202ENSMUST00000092838 3529 ntAPPRIS P1 TSL 5 BASIC4.12□□□□□ -1.75
Ccdc3Q9D6Y1 Gm8402-201ENSMUST00000118183 1770 ntBASIC4.12□□□□□ -1.75
Ccdc3Q9D6Y1 Gm8383-201ENSMUST00000121179 1770 ntBASIC4.12□□□□□ -1.75
Ccdc3Q9D6Y1 Olfr118-203ENSMUST00000216551 1772 ntAPPRIS P1 TSL 5 BASIC4.12□□□□□ -1.75
Ccdc3Q9D6Y1 AC103672.3-201ENSMUST00000227649 3243 ntBASIC4.12□□□□□ -1.75
Ccdc3Q9D6Y1 4932414N04Rik-204ENSMUST00000128259 3645 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
Ccdc3Q9D6Y1 1700017N19Rik-206ENSMUST00000190386 1483 ntTSL 5 BASIC4.11□□□□□ -1.75
Ccdc3Q9D6Y1 Gm281-201ENSMUST00000144914 2952 ntAPPRIS P1 TSL 5 BASIC4.11□□□□□ -1.75
Ccdc3Q9D6Y1 Olfr1318-205ENSMUST00000217533 3747 ntAPPRIS P1 TSL 5 BASIC4.11□□□□□ -1.75
Ccdc3Q9D6Y1 Vmn2r83-201ENSMUST00000167976 2610 ntAPPRIS P1 TSL 5 BASIC4.11□□□□□ -1.75
Ccdc3Q9D6Y1 AC120375.2-201ENSMUST00000226532 1853 ntBASIC4.11□□□□□ -1.75
Ccdc3Q9D6Y1 Gm36951-201ENSMUST00000193840 2687 ntBASIC4.11□□□□□ -1.75
Ccdc3Q9D6Y1 4930510E17Rik-201ENSMUST00000034550 1639 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
Ccdc3Q9D6Y1 Olfr260-ps1-201ENSMUST00000117279 822 ntBASIC4.11□□□□□ -1.75
Ccdc3Q9D6Y1 Gm12067-201ENSMUST00000119755 1148 ntBASIC4.11□□□□□ -1.75
Ccdc3Q9D6Y1 Gm15263-201ENSMUST00000121556 642 ntBASIC4.11□□□□□ -1.75
Ccdc3Q9D6Y1 Gm12087-201ENSMUST00000121878 258 ntBASIC4.11□□□□□ -1.75
Ccdc3Q9D6Y1 Gm22453-201ENSMUST00000122801 318 ntBASIC4.11□□□□□ -1.75
Ccdc3Q9D6Y1 Gm15962-201ENSMUST00000124184 750 ntTSL 3 BASIC4.11□□□□□ -1.75
Ccdc3Q9D6Y1 Airn-203ENSMUST00000159791 485 ntTSL 3 BASIC4.11□□□□□ -1.75
Ccdc3Q9D6Y1 Gm17421-201ENSMUST00000167845 674 ntBASIC4.11□□□□□ -1.75
Ccdc3Q9D6Y1 Gm20663-201ENSMUST00000176647 474 ntTSL 3 BASIC4.11□□□□□ -1.75
Ccdc3Q9D6Y1 Gm14419-204ENSMUST00000178182 192 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
Ccdc3Q9D6Y1 Gm2004-202ENSMUST00000178872 192 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
Ccdc3Q9D6Y1 Gm14295-203ENSMUST00000179435 192 ntTSL 5 BASIC4.11□□□□□ -1.75
Ccdc3Q9D6Y1 Gm27695-201ENSMUST00000184301 91 ntBASIC4.11□□□□□ -1.75
Ccdc3Q9D6Y1 Gm5995-201ENSMUST00000204107 1273 ntBASIC4.11□□□□□ -1.75
Ccdc3Q9D6Y1 CT030242.2-201ENSMUST00000221588 148 ntBASIC4.11□□□□□ -1.75
Ccdc3Q9D6Y1 CT485612.3-201ENSMUST00000222179 408 ntBASIC4.11□□□□□ -1.75
Ccdc3Q9D6Y1 Olfr1451-201ENSMUST00000063144 933 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
Ccdc3Q9D6Y1 Gm24207-201ENSMUST00000082781 108 ntBASIC4.11□□□□□ -1.75
Ccdc3Q9D6Y1 Olfr1314-201ENSMUST00000099598 939 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
Ccdc3Q9D6Y1 Gm8674-201ENSMUST00000179367 3047 ntBASIC4.11□□□□□ -1.75
Ccdc3Q9D6Y1 Gm37192-201ENSMUST00000194479 1348 ntBASIC4.11□□□□□ -1.75
Ccdc3Q9D6Y1 March1-202ENSMUST00000072482 3953 ntTSL 5 BASIC4.11□□□□□ -1.75
Ccdc3Q9D6Y1 Fbxw23-202ENSMUST00000198480 1388 ntBASIC4.11□□□□□ -1.75
Retrieved 100 of 76,532 protein–RNA pairs in 96.4 ms