Protein–RNA interactions for Protein: Q9CU62

Smc1a, Structural maintenance of chromosomes protein 1A, mousemouse

Known RBP Predictions only

Length 1,233 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc1aQ9CU62 Gm14553-201ENSMUST00000126711 1118 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
Smc1aQ9CU62 Gm2101-204ENSMUST00000137421 1118 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
Smc1aQ9CU62 Gm3669-205ENSMUST00000144018 1118 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
Smc1aQ9CU62 Gm24774-201ENSMUST00000157384 134 ntBASIC4.95□□□□□ -1.62
Smc1aQ9CU62 Gm23905-201ENSMUST00000157568 109 ntBASIC4.95□□□□□ -1.62
Smc1aQ9CU62 Gm8356-202ENSMUST00000164917 984 ntAPPRIS ALT2 TSL 5 BASIC4.95□□□□□ -1.62
Smc1aQ9CU62 Reg3d-202ENSMUST00000167492 644 ntTSL 5 BASIC4.95□□□□□ -1.62
Smc1aQ9CU62 Mir6907-201ENSMUST00000183764 71 ntBASIC4.95□□□□□ -1.62
Smc1aQ9CU62 4930548G14Rik-202ENSMUST00000190364 1185 ntTSL 2 BASIC4.95□□□□□ -1.62
Smc1aQ9CU62 Ighv10-4-201ENSMUST00000193702 299 ntBASIC4.95□□□□□ -1.62
Smc1aQ9CU62 4930590L20Rik-201ENSMUST00000193820 553 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
Smc1aQ9CU62 1700012D16Rik-201ENSMUST00000197231 577 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
Smc1aQ9CU62 Gm44376-201ENSMUST00000197570 128 ntBASIC4.95□□□□□ -1.62
Smc1aQ9CU62 Gm22897-201ENSMUST00000197860 128 ntBASIC4.95□□□□□ -1.62
Smc1aQ9CU62 Gm43441-201ENSMUST00000201458 205 ntBASIC4.95□□□□□ -1.62
Smc1aQ9CU62 Gm43090-201ENSMUST00000202459 314 ntBASIC4.95□□□□□ -1.62
Smc1aQ9CU62 Gm19131-201ENSMUST00000203408 789 ntBASIC4.95□□□□□ -1.62
Smc1aQ9CU62 Reg3d-203ENSMUST00000205240 544 ntTSL 2 BASIC4.95□□□□□ -1.62
Smc1aQ9CU62 Gm19366-201ENSMUST00000206996 156 ntBASIC4.95□□□□□ -1.62
Smc1aQ9CU62 Gm38944-201ENSMUST00000208218 512 ntTSL 2 BASIC4.95□□□□□ -1.62
Smc1aQ9CU62 Gm45086-201ENSMUST00000209052 462 ntTSL 5 BASIC4.95□□□□□ -1.62
Smc1aQ9CU62 Gm45857-201ENSMUST00000212207 356 ntBASIC4.95□□□□□ -1.62
Smc1aQ9CU62 CT025617.1-201ENSMUST00000216487 725 ntTSL 5 BASIC4.95□□□□□ -1.62
Smc1aQ9CU62 Olfr1093-201ENSMUST00000055273 969 ntAPPRIS P1 BASIC4.95□□□□□ -1.62
Smc1aQ9CU62 Olfr1136-201ENSMUST00000077471 1067 ntAPPRIS P1 BASIC4.95□□□□□ -1.62
Smc1aQ9CU62 Gm10491-201ENSMUST00000085330 117 ntAPPRIS P1 TSL 5 BASIC4.95□□□□□ -1.62
Smc1aQ9CU62 Obp1b-201ENSMUST00000088198 797 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
Smc1aQ9CU62 Reg3d-201ENSMUST00000089667 782 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
Smc1aQ9CU62 Olfr1331-202ENSMUST00000106360 3230 ntAPPRIS P2 TSL 5 BASIC4.95□□□□□ -1.62
Smc1aQ9CU62 Olfr1020-202ENSMUST00000215347 2640 ntAPPRIS P1 TSL 3 BASIC4.95□□□□□ -1.62
Smc1aQ9CU62 Gm42704-201ENSMUST00000196875 1778 ntBASIC4.95□□□□□ -1.62
Smc1aQ9CU62 Hormad1-204ENSMUST00000171191 1437 ntAPPRIS P3 TSL 1 (best) BASIC4.95□□□□□ -1.62
Smc1aQ9CU62 Olfr1188-202ENSMUST00000217131 1406 ntAPPRIS ALT2 TSL 3 BASIC4.95□□□□□ -1.62
Smc1aQ9CU62 Gm43369-201ENSMUST00000196373 1552 ntBASIC4.95□□□□□ -1.62
Smc1aQ9CU62 Gm2396-202ENSMUST00000188232 3433 ntTSL 5 BASIC4.94□□□□□ -1.62
Smc1aQ9CU62 Gm6205-202ENSMUST00000190001 2515 ntAPPRIS P1 TSL 5 BASIC4.94□□□□□ -1.62
Smc1aQ9CU62 Olfr149-202ENSMUST00000215192 2806 ntAPPRIS P1 TSL 5 BASIC4.94□□□□□ -1.62
Smc1aQ9CU62 Csn3-202ENSMUST00000113267 1258 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
Smc1aQ9CU62 Olfr1171-ps1-201ENSMUST00000118079 837 ntBASIC4.94□□□□□ -1.62
Smc1aQ9CU62 Vmn1r-ps2-201ENSMUST00000118464 834 ntBASIC4.94□□□□□ -1.62
Smc1aQ9CU62 Gm12465-201ENSMUST00000118591 300 ntBASIC4.94□□□□□ -1.62
Smc1aQ9CU62 Rpl23a-ps14-201ENSMUST00000118777 424 ntBASIC4.94□□□□□ -1.62
Smc1aQ9CU62 Klra14-ps-201ENSMUST00000119532 802 ntBASIC4.94□□□□□ -1.62
Smc1aQ9CU62 Gm14881-201ENSMUST00000120366 372 ntBASIC4.94□□□□□ -1.62
Smc1aQ9CU62 Gm15530-201ENSMUST00000122206 555 ntBASIC4.94□□□□□ -1.62
Smc1aQ9CU62 Gm2182-201ENSMUST00000145243 663 ntBASIC4.94□□□□□ -1.62
Smc1aQ9CU62 Gm22600-201ENSMUST00000157598 269 ntBASIC4.94□□□□□ -1.62
Smc1aQ9CU62 Gm23496-201ENSMUST00000157741 248 ntBASIC4.94□□□□□ -1.62
Smc1aQ9CU62 Gm2389-201ENSMUST00000160487 189 ntBASIC4.94□□□□□ -1.62
Smc1aQ9CU62 Vmn1r113-201ENSMUST00000168794 894 ntTSL 5 BASIC4.94□□□□□ -1.62
Smc1aQ9CU62 Gm6337-202ENSMUST00000170613 997 ntAPPRIS ALT2 TSL 5 BASIC4.94□□□□□ -1.62
Smc1aQ9CU62 Gm18522-201ENSMUST00000173947 650 ntBASIC4.94□□□□□ -1.62
Smc1aQ9CU62 Vmn1r-ps28-201ENSMUST00000174767 942 ntBASIC4.94□□□□□ -1.62
Smc1aQ9CU62 Prl8a6-201ENSMUST00000018392 900 ntAPPRIS P3 TSL 1 (best) BASIC4.94□□□□□ -1.62
Smc1aQ9CU62 Khdrbs2-202ENSMUST00000185666 543 ntTSL 2 BASIC4.94□□□□□ -1.62
Smc1aQ9CU62 A930005H10Rik-205ENSMUST00000187055 436 ntTSL 3 BASIC4.94□□□□□ -1.62
Smc1aQ9CU62 Olfr442-ps1-201ENSMUST00000204261 316 ntBASIC4.94□□□□□ -1.62
Smc1aQ9CU62 Gm39302-201ENSMUST00000215184 636 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
Smc1aQ9CU62 AC153516.1-201ENSMUST00000217955 779 ntBASIC4.94□□□□□ -1.62
Smc1aQ9CU62 AC166263.1-201ENSMUST00000218586 238 ntBASIC4.94□□□□□ -1.62
Smc1aQ9CU62 AL589696.1-201ENSMUST00000225711 330 ntBASIC4.94□□□□□ -1.62
Smc1aQ9CU62 4933400A11Rik-201ENSMUST00000068874 1230 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
Smc1aQ9CU62 Gm6043-201ENSMUST00000099961 492 ntBASIC4.94□□□□□ -1.62
Smc1aQ9CU62 Pign-201ENSMUST00000070699 6528 ntAPPRIS P1 TSL 5 BASIC4.94□□□□□ -1.62
Smc1aQ9CU62 Gm43705-201ENSMUST00000195958 3717 ntBASIC4.94□□□□□ -1.62
Smc1aQ9CU62 Gm13100-201ENSMUST00000117157 1439 ntBASIC4.94□□□□□ -1.62
Smc1aQ9CU62 Olfr694-204ENSMUST00000216895 4853 ntAPPRIS P1 TSL 5 BASIC4.94□□□□□ -1.62
Smc1aQ9CU62 Gm45033-201ENSMUST00000206710 3167 ntBASIC4.94□□□□□ -1.62
Smc1aQ9CU62 Olfr870-202ENSMUST00000215984 4091 ntAPPRIS P1 TSL 5 BASIC4.93□□□□□ -1.62
Smc1aQ9CU62 Gm43662-201ENSMUST00000198310 2271 ntBASIC4.93□□□□□ -1.62
Smc1aQ9CU62 Igkv6-32-201ENSMUST00000103377 366 ntAPPRIS P1 BASIC4.93□□□□□ -1.62
Smc1aQ9CU62 Gm24608-201ENSMUST00000104381 136 ntBASIC4.93□□□□□ -1.62
Smc1aQ9CU62 Gm12448-201ENSMUST00000118852 655 ntBASIC4.93□□□□□ -1.62
Smc1aQ9CU62 Gm12564-201ENSMUST00000119860 321 ntBASIC4.93□□□□□ -1.62
Smc1aQ9CU62 Cmc4-202ENSMUST00000120286 516 ntAPPRIS P1 TSL 2 BASIC4.93□□□□□ -1.62
Smc1aQ9CU62 Gm14037-201ENSMUST00000120576 313 ntBASIC4.93□□□□□ -1.62
Smc1aQ9CU62 Olfr660-ps1-201ENSMUST00000121526 375 ntBASIC4.93□□□□□ -1.62
Smc1aQ9CU62 Gm13366-201ENSMUST00000122198 970 ntBASIC4.93□□□□□ -1.62
Smc1aQ9CU62 Hba-ps4-201ENSMUST00000128900 447 ntBASIC4.93□□□□□ -1.62
Smc1aQ9CU62 Gm4181-201ENSMUST00000170249 898 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
Smc1aQ9CU62 Gm25037-201ENSMUST00000175418 110 ntBASIC4.93□□□□□ -1.62
Smc1aQ9CU62 Nutf2-ps2-201ENSMUST00000179225 384 ntBASIC4.93□□□□□ -1.62
Smc1aQ9CU62 Skint2-204ENSMUST00000186969 1258 ntAPPRIS P2 TSL 1 (best) BASIC4.93□□□□□ -1.62
Smc1aQ9CU62 Pik3c2g-209ENSMUST00000187618 2023 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
Smc1aQ9CU62 Gm8823-201ENSMUST00000193158 433 ntBASIC4.93□□□□□ -1.62
Smc1aQ9CU62 Gm30790-201ENSMUST00000208256 958 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
Smc1aQ9CU62 Gm45367-201ENSMUST00000210171 347 ntBASIC4.93□□□□□ -1.62
Smc1aQ9CU62 Gm32975-201ENSMUST00000211651 584 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
Smc1aQ9CU62 Gm45701-201ENSMUST00000212049 235 ntBASIC4.93□□□□□ -1.62
Smc1aQ9CU62 AC153729.2-201ENSMUST00000215166 560 ntTSL 3 BASIC4.93□□□□□ -1.62
Smc1aQ9CU62 CT486006.1-201ENSMUST00000216797 227 ntTSL 5 BASIC4.93□□□□□ -1.62
Smc1aQ9CU62 Gm18442-201ENSMUST00000220925 639 ntBASIC4.93□□□□□ -1.62
Smc1aQ9CU62 Gm17177-202ENSMUST00000222007 990 ntTSL 5 BASIC4.93□□□□□ -1.62
Smc1aQ9CU62 CT030254.3-201ENSMUST00000225959 1231 ntBASIC4.93□□□□□ -1.62
Smc1aQ9CU62 BC023105-201ENSMUST00000073997 1227 ntBASIC4.93□□□□□ -1.62
Smc1aQ9CU62 Spink12-201ENSMUST00000081271 1007 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
Smc1aQ9CU62 Gm25140-201ENSMUST00000083254 140 ntBASIC4.93□□□□□ -1.62
Smc1aQ9CU62 n-R5s152-201ENSMUST00000093641 119 ntBASIC4.93□□□□□ -1.62
Smc1aQ9CU62 Cd84-205ENSMUST00000155802 3291 ntAPPRIS P3 TSL 1 (best) BASIC4.93□□□□□ -1.62
Smc1aQ9CU62 Gm20515-201ENSMUST00000174440 4824 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
Retrieved 100 of 76,532 protein–RNA pairs in 87.8 ms