Protein–RNA interactions for Protein: Q99LI7

Cstf3, Cleavage stimulation factor subunit 3, mousemouse

Known RBP Predictions only

Length 717 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cstf3Q99LI7 Gm27942-201ENSMUST00000184669 101 ntBASIC4.56□□□□□ -1.68
Cstf3Q99LI7 Gm28061-201ENSMUST00000189085 807 ntBASIC4.56□□□□□ -1.68
Cstf3Q99LI7 Gm28872-201ENSMUST00000191518 158 ntBASIC4.56□□□□□ -1.68
Cstf3Q99LI7 Gm37947-201ENSMUST00000192740 894 ntTSL 5 BASIC4.56□□□□□ -1.68
Cstf3Q99LI7 Gstm2-ps1-201ENSMUST00000201478 657 ntBASIC4.56□□□□□ -1.68
Cstf3Q99LI7 Snhg1-205ENSMUST00000205825 495 ntTSL 3 BASIC4.56□□□□□ -1.68
Cstf3Q99LI7 Olfr1309-201ENSMUST00000207885 964 ntBASIC4.56□□□□□ -1.68
Cstf3Q99LI7 AC153729.2-201ENSMUST00000215166 560 ntTSL 3 BASIC4.56□□□□□ -1.68
Cstf3Q99LI7 AC160030.1-201ENSMUST00000218916 506 ntTSL 2 BASIC4.56□□□□□ -1.68
Cstf3Q99LI7 C030006N10Rik-201ENSMUST00000219077 517 ntBASIC4.56□□□□□ -1.68
Cstf3Q99LI7 Gm36372-201ENSMUST00000221011 778 ntTSL 5 BASIC4.56□□□□□ -1.68
Cstf3Q99LI7 AC153646.1-201ENSMUST00000223229 1279 ntBASIC4.56□□□□□ -1.68
Cstf3Q99LI7 AC159252.1-201ENSMUST00000224450 553 ntBASIC4.56□□□□□ -1.68
Cstf3Q99LI7 AL589696.1-201ENSMUST00000225711 330 ntBASIC4.56□□□□□ -1.68
Cstf3Q99LI7 AC131745.2-201ENSMUST00000225736 565 ntBASIC4.56□□□□□ -1.68
Cstf3Q99LI7 AC125539.2-202ENSMUST00000227983 587 ntBASIC4.56□□□□□ -1.68
Cstf3Q99LI7 AC125539.2-201ENSMUST00000228339 753 ntBASIC4.56□□□□□ -1.68
Cstf3Q99LI7 Cr2-201ENSMUST00000043104 1044 ntTSL 5 BASIC4.56□□□□□ -1.68
Cstf3Q99LI7 Olfr919-201ENSMUST00000071425 948 ntAPPRIS P2 BASIC4.56□□□□□ -1.68
Cstf3Q99LI7 Gm25403-201ENSMUST00000082971 143 ntBASIC4.56□□□□□ -1.68
Cstf3Q99LI7 Mir31-201ENSMUST00000083474 106 ntBASIC4.56□□□□□ -1.68
Cstf3Q99LI7 Olfr1220-201ENSMUST00000099789 1026 ntAPPRIS P1 BASIC4.56□□□□□ -1.68
Cstf3Q99LI7 Olfr1220-202ENSMUST00000099806 1201 ntAPPRIS P1 TSL 3 BASIC4.56□□□□□ -1.68
Cstf3Q99LI7 Gm42729-201ENSMUST00000201770 2930 ntBASIC4.56□□□□□ -1.68
Cstf3Q99LI7 Cyld-204ENSMUST00000209206 4032 ntTSL 5 BASIC4.56□□□□□ -1.68
Cstf3Q99LI7 Olfr1143-203ENSMUST00000111568 1970 ntAPPRIS P1 TSL 5 BASIC4.56□□□□□ -1.68
Cstf3Q99LI7 Olfr145-202ENSMUST00000213688 6691 ntAPPRIS P1 TSL 5 BASIC4.56□□□□□ -1.68
Cstf3Q99LI7 Spp1-204ENSMUST00000112747 1507 ntAPPRIS P3 TSL 1 (best) BASIC4.56□□□□□ -1.68
Cstf3Q99LI7 Gm38104-201ENSMUST00000195121 1895 ntBASIC4.56□□□□□ -1.68
Cstf3Q99LI7 4930579C12Rik-202ENSMUST00000187015 3676 ntTSL 2 BASIC4.56□□□□□ -1.68
Cstf3Q99LI7 Pign-205ENSMUST00000186485 6759 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
Cstf3Q99LI7 Hormad1-203ENSMUST00000107154 1444 ntAPPRIS P3 TSL 1 (best) BASIC4.55□□□□□ -1.68
Cstf3Q99LI7 4931412I15Rik-201ENSMUST00000207844 1448 ntBASIC4.55□□□□□ -1.68
Cstf3Q99LI7 Olfr1167-202ENSMUST00000216951 4276 ntAPPRIS P1 TSL 5 BASIC4.55□□□□□ -1.68
Cstf3Q99LI7 Ccr9-205ENSMUST00000180093 4239 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
Cstf3Q99LI7 AC108802.1-201ENSMUST00000219501 3142 ntBASIC4.55□□□□□ -1.68
Cstf3Q99LI7 Gm37174-201ENSMUST00000194699 3058 ntBASIC4.55□□□□□ -1.68
Cstf3Q99LI7 Trim12c-201ENSMUST00000059037 3740 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
Cstf3Q99LI7 Vmn1r32-202ENSMUST00000227014 2661 ntAPPRIS P1 BASIC4.55□□□□□ -1.68
Cstf3Q99LI7 Vmn1r72-203ENSMUST00000227010 6279 ntAPPRIS P1 BASIC4.55□□□□□ -1.68
Cstf3Q99LI7 Kcnt2-201ENSMUST00000119786 3624 ntTSL 5 BASIC4.55□□□□□ -1.68
Cstf3Q99LI7 Kif20b-201ENSMUST00000087341 5564 ntAPPRIS P2 TSL 5 BASIC4.55□□□□□ -1.68
Cstf3Q99LI7 Trappc1-203ENSMUST00000102602 751 ntAPPRIS P1 TSL 2 BASIC4.55□□□□□ -1.68
Cstf3Q99LI7 Gm12520-201ENSMUST00000117493 316 ntBASIC4.55□□□□□ -1.68
Cstf3Q99LI7 Gm3267-201ENSMUST00000118671 473 ntBASIC4.55□□□□□ -1.68
Cstf3Q99LI7 Rab9b-ps1-201ENSMUST00000119785 606 ntBASIC4.55□□□□□ -1.68
Cstf3Q99LI7 Gm5384-201ENSMUST00000120313 463 ntBASIC4.55□□□□□ -1.68
Cstf3Q99LI7 Gm16100-201ENSMUST00000120489 231 ntBASIC4.55□□□□□ -1.68
Cstf3Q99LI7 Olfr404-ps1-201ENSMUST00000121065 972 ntAPPRIS P1 BASIC4.55□□□□□ -1.68
Cstf3Q99LI7 Pdcl2-202ENSMUST00000122213 1049 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
Cstf3Q99LI7 Gm12854-201ENSMUST00000128518 297 ntBASIC4.55□□□□□ -1.68
Cstf3Q99LI7 Gtsf1-205ENSMUST00000141364 700 ntAPPRIS P1 TSL 5 BASIC4.55□□□□□ -1.68
Cstf3Q99LI7 Gm11376-201ENSMUST00000144541 231 ntTSL 5 BASIC4.55□□□□□ -1.68
Cstf3Q99LI7 Gm14011-201ENSMUST00000145178 302 ntTSL 2 BASIC4.55□□□□□ -1.68
Cstf3Q99LI7 Gm12707-201ENSMUST00000155789 489 ntTSL 3 BASIC4.55□□□□□ -1.68
Cstf3Q99LI7 Taf1d-202ENSMUST00000164079 1005 ntAPPRIS ALT2 TSL 1 (best) BASIC4.55□□□□□ -1.68
Cstf3Q99LI7 1700116B05Rik-201ENSMUST00000173461 414 ntTSL 2 BASIC4.55□□□□□ -1.68
Cstf3Q99LI7 Gm25944-201ENSMUST00000178758 94 ntBASIC4.55□□□□□ -1.68
Cstf3Q99LI7 Gm27543-201ENSMUST00000183562 177 ntBASIC4.55□□□□□ -1.68
Cstf3Q99LI7 Mir7020-201ENSMUST00000183787 70 ntBASIC4.55□□□□□ -1.68
Cstf3Q99LI7 Gm27551-201ENSMUST00000184258 77 ntBASIC4.55□□□□□ -1.68
Cstf3Q99LI7 Snhg14-204ENSMUST00000185890 756 ntTSL 5 BASIC4.55□□□□□ -1.68
Cstf3Q99LI7 Gm10421-203ENSMUST00000190266 781 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
Cstf3Q99LI7 Gm38149-201ENSMUST00000191943 339 ntBASIC4.55□□□□□ -1.68
Cstf3Q99LI7 Gm34068-201ENSMUST00000193310 632 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
Cstf3Q99LI7 Gm37223-202ENSMUST00000193592 490 ntTSL 3 BASIC4.55□□□□□ -1.68
Cstf3Q99LI7 Gm37202-201ENSMUST00000193679 361 ntTSL 3 BASIC4.55□□□□□ -1.68
Cstf3Q99LI7 2900035J10Rik-201ENSMUST00000194966 532 ntBASIC4.55□□□□□ -1.68
Cstf3Q99LI7 Gm37571-201ENSMUST00000195048 614 ntTSL 3 BASIC4.55□□□□□ -1.68
Cstf3Q99LI7 Gtpbp4-ps7-201ENSMUST00000197059 297 ntBASIC4.55□□□□□ -1.68
Cstf3Q99LI7 Gm5309-201ENSMUST00000197416 677 ntBASIC4.55□□□□□ -1.68
Cstf3Q99LI7 Gm31026-201ENSMUST00000198762 821 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
Cstf3Q99LI7 Gm43493-201ENSMUST00000199837 202 ntBASIC4.55□□□□□ -1.68
Cstf3Q99LI7 2900064F13Rik-201ENSMUST00000202166 1008 ntBASIC4.55□□□□□ -1.68
Cstf3Q99LI7 Gm30717-201ENSMUST00000206549 494 ntTSL 5 BASIC4.55□□□□□ -1.68
Cstf3Q99LI7 4930518J21Rik-201ENSMUST00000209557 573 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
Cstf3Q99LI7 Olfr1073-ps1-202ENSMUST00000215705 478 ntBASIC4.55□□□□□ -1.68
Cstf3Q99LI7 AC171204.1-201ENSMUST00000215867 975 ntTSL 5 BASIC4.55□□□□□ -1.68
Cstf3Q99LI7 Gm26564-201ENSMUST00000216701 378 ntTSL 3 BASIC4.55□□□□□ -1.68
Cstf3Q99LI7 AC122210.1-201ENSMUST00000217923 675 ntTSL 3 BASIC4.55□□□□□ -1.68
Cstf3Q99LI7 AC159244.1-201ENSMUST00000220964 594 ntBASIC4.55□□□□□ -1.68
Cstf3Q99LI7 Gstz1-204ENSMUST00000222222 724 ntAPPRIS ALT1 TSL 2 BASIC4.55□□□□□ -1.68
Cstf3Q99LI7 AC099612.2-201ENSMUST00000226824 721 ntBASIC4.55□□□□□ -1.68
Cstf3Q99LI7 AC133910.1-201ENSMUST00000228128 624 ntBASIC4.55□□□□□ -1.68
Cstf3Q99LI7 Ccl11-201ENSMUST00000000342 1082 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
Cstf3Q99LI7 Olfr1497-201ENSMUST00000061993 945 ntAPPRIS P1 BASIC4.55□□□□□ -1.68
Cstf3Q99LI7 Vmn1r48-201ENSMUST00000073415 909 ntAPPRIS P1 BASIC4.55□□□□□ -1.68
Cstf3Q99LI7 Olfr749-201ENSMUST00000074674 1016 ntAPPRIS P1 TSL 3 BASIC4.55□□□□□ -1.68
Cstf3Q99LI7 Gm7665-201ENSMUST00000076710 297 ntBASIC4.55□□□□□ -1.68
Cstf3Q99LI7 Gm23300-201ENSMUST00000082712 125 ntBASIC4.55□□□□□ -1.68
Cstf3Q99LI7 n-R5s152-201ENSMUST00000093641 119 ntBASIC4.55□□□□□ -1.68
Cstf3Q99LI7 n-R5s13-201ENSMUST00000093707 119 ntBASIC4.55□□□□□ -1.68
Cstf3Q99LI7 Gm10356-201ENSMUST00000097152 1258 ntBASIC4.55□□□□□ -1.68
Cstf3Q99LI7 Clca4c-ps-201ENSMUST00000098551 712 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
Cstf3Q99LI7 Cacnb4-202ENSMUST00000102760 7872 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
Cstf3Q99LI7 Olfr985-202ENSMUST00000214981 1879 ntAPPRIS P1 TSL 3 BASIC4.55□□□□□ -1.68
Cstf3Q99LI7 Vmn1r210-202ENSMUST00000226180 3116 ntAPPRIS P1 BASIC4.55□□□□□ -1.68
Cstf3Q99LI7 Vmn1r35-202ENSMUST00000227346 1854 ntBASIC4.55□□□□□ -1.68
Cstf3Q99LI7 Olfr1263-204ENSMUST00000217065 4186 ntAPPRIS P1 TSL 5 BASIC4.55□□□□□ -1.68
Cstf3Q99LI7 Kcnrg-201ENSMUST00000051184 1766 ntAPPRIS P2 TSL 1 (best) BASIC4.55□□□□□ -1.68
Retrieved 100 of 76,532 protein–RNA pairs in 113.1 ms