Protein–RNA interactions for Protein: Q8CIE6

Copa, Coatomer subunit alpha, mousemouse

Known RBP Predictions only

Length 1,224 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CopaQ8CIE6 Gm15687-201ENSMUST00000141440 269 ntTSL 3 BASIC5.08□□□□□ -1.6
CopaQ8CIE6 Gm26310-201ENSMUST00000157766 117 ntBASIC5.08□□□□□ -1.6
CopaQ8CIE6 Gm23318-201ENSMUST00000158000 108 ntBASIC5.08□□□□□ -1.6
CopaQ8CIE6 Gm23513-201ENSMUST00000158181 133 ntBASIC5.08□□□□□ -1.6
CopaQ8CIE6 Gm25907-201ENSMUST00000158486 125 ntBASIC5.08□□□□□ -1.6
CopaQ8CIE6 Gm5929-201ENSMUST00000166883 487 ntBASIC5.08□□□□□ -1.6
CopaQ8CIE6 Vmn1r-ps25-201ENSMUST00000173545 799 ntBASIC5.08□□□□□ -1.6
CopaQ8CIE6 Gm20674-201ENSMUST00000177452 369 ntBASIC5.08□□□□□ -1.6
CopaQ8CIE6 Gm26365-201ENSMUST00000179177 94 ntBASIC5.08□□□□□ -1.6
CopaQ8CIE6 Gm27551-201ENSMUST00000184258 77 ntBASIC5.08□□□□□ -1.6
CopaQ8CIE6 Gm33973-201ENSMUST00000195148 534 ntBASIC5.08□□□□□ -1.6
CopaQ8CIE6 BX530055.1-201ENSMUST00000197285 122 ntBASIC5.08□□□□□ -1.6
CopaQ8CIE6 Igkv13-62-1-201ENSMUST00000198690 317 ntBASIC5.08□□□□□ -1.6
CopaQ8CIE6 Gm2623-201ENSMUST00000199229 286 ntBASIC5.08□□□□□ -1.6
CopaQ8CIE6 Gm42459-201ENSMUST00000199679 742 ntBASIC5.08□□□□□ -1.6
CopaQ8CIE6 Csn1s2a-209ENSMUST00000200322 797 ntAPPRIS ALT2 TSL 2 BASIC5.08□□□□□ -1.6
CopaQ8CIE6 Gm36520-201ENSMUST00000200449 400 ntTSL 3 BASIC5.08□□□□□ -1.6
CopaQ8CIE6 Gm4321-201ENSMUST00000200520 442 ntBASIC5.08□□□□□ -1.6
CopaQ8CIE6 Gm43036-201ENSMUST00000200594 373 ntBASIC5.08□□□□□ -1.6
CopaQ8CIE6 Gm43925-201ENSMUST00000203498 206 ntBASIC5.08□□□□□ -1.6
CopaQ8CIE6 4930528H21Rik-201ENSMUST00000204264 495 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
CopaQ8CIE6 Gm44622-201ENSMUST00000209128 1033 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
CopaQ8CIE6 Gm17766-201ENSMUST00000209223 442 ntBASIC5.08□□□□□ -1.6
CopaQ8CIE6 4930470O06Rik-201ENSMUST00000209438 662 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
CopaQ8CIE6 Gm5750-201ENSMUST00000218711 801 ntBASIC5.08□□□□□ -1.6
CopaQ8CIE6 AC127279.1-201ENSMUST00000220140 637 ntBASIC5.08□□□□□ -1.6
CopaQ8CIE6 AC164116.2-201ENSMUST00000225398 1038 ntBASIC5.08□□□□□ -1.6
CopaQ8CIE6 Olfr1461-201ENSMUST00000053772 939 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
CopaQ8CIE6 Ear6-201ENSMUST00000074477 713 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
CopaQ8CIE6 Olfr476-201ENSMUST00000077249 933 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
CopaQ8CIE6 Mir463-201ENSMUST00000093570 75 ntBASIC5.08□□□□□ -1.6
CopaQ8CIE6 Krtap31-1-201ENSMUST00000093935 973 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
CopaQ8CIE6 Cenpj-201ENSMUST00000065302 4363 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
CopaQ8CIE6 Gm3665-201ENSMUST00000177214 2461 ntBASIC5.08□□□□□ -1.6
CopaQ8CIE6 Vmn2r-ps51-201ENSMUST00000177271 2461 ntBASIC5.08□□□□□ -1.6
CopaQ8CIE6 Il6-203ENSMUST00000199183 2343 ntTSL 2 BASIC5.08□□□□□ -1.6
CopaQ8CIE6 Zfp738-203ENSMUST00000137496 13215 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
CopaQ8CIE6 Gm43662-201ENSMUST00000198310 2271 ntBASIC5.08□□□□□ -1.6
CopaQ8CIE6 Gm21037-201ENSMUST00000209086 2608 ntBASIC5.08□□□□□ -1.6
CopaQ8CIE6 Gm20756-201ENSMUST00000201080 1595 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
CopaQ8CIE6 Gm7739-201ENSMUST00000221131 1560 ntBASIC5.08□□□□□ -1.6
CopaQ8CIE6 Slc31a1-202ENSMUST00000122092 4154 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
CopaQ8CIE6 Cyp7a1-201ENSMUST00000029905 4172 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
CopaQ8CIE6 Mapk10-204ENSMUST00000112848 6761 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
CopaQ8CIE6 Mtm1-213ENSMUST00000171933 3488 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
CopaQ8CIE6 Map3k19-201ENSMUST00000061512 3936 ntAPPRIS P2 TSL 5 BASIC5.07□□□□□ -1.6
CopaQ8CIE6 Abi3bp-202ENSMUST00000096012 4387 ntAPPRIS ALT2 TSL 1 (best) BASIC5.07□□□□□ -1.6
CopaQ8CIE6 Zfp976-203ENSMUST00000187616 1908 ntTSL 5 BASIC5.07□□□□□ -1.6
CopaQ8CIE6 Zfyve9-203ENSMUST00000106658 5987 ntAPPRIS ALT2 TSL 5 BASIC5.07□□□□□ -1.6
CopaQ8CIE6 1700091H14Rik-202ENSMUST00000185725 1388 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
CopaQ8CIE6 Gm43178-201ENSMUST00000197257 1386 ntBASIC5.07□□□□□ -1.6
CopaQ8CIE6 Gm37767-201ENSMUST00000193239 1834 ntBASIC5.07□□□□□ -1.6
CopaQ8CIE6 Zfp975-201ENSMUST00000107992 3148 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
CopaQ8CIE6 Gabra3-202ENSMUST00000114554 1790 ntAPPRIS ALT2 TSL 5 BASIC5.07□□□□□ -1.6
CopaQ8CIE6 Mir193b-201ENSMUST00000103784 79 ntBASIC5.07□□□□□ -1.6
CopaQ8CIE6 H2al1n-201ENSMUST00000105137 514 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
CopaQ8CIE6 Gm11020-201ENSMUST00000109447 186 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
CopaQ8CIE6 Gm14050-201ENSMUST00000117052 346 ntBASIC5.07□□□□□ -1.6
CopaQ8CIE6 Rpl38-ps2-201ENSMUST00000117356 213 ntBASIC5.07□□□□□ -1.6
CopaQ8CIE6 Gm8202-201ENSMUST00000117682 310 ntBASIC5.07□□□□□ -1.6
CopaQ8CIE6 Gm8129-201ENSMUST00000118230 213 ntBASIC5.07□□□□□ -1.6
CopaQ8CIE6 Gm15012-201ENSMUST00000119176 106 ntBASIC5.07□□□□□ -1.6
CopaQ8CIE6 Gm15791-201ENSMUST00000120365 319 ntBASIC5.07□□□□□ -1.6
CopaQ8CIE6 Pdcl2-202ENSMUST00000122213 1049 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
CopaQ8CIE6 Olfr1027-ps1-201ENSMUST00000122338 875 ntBASIC5.07□□□□□ -1.6
CopaQ8CIE6 Gm14027-201ENSMUST00000135186 622 ntTSL 3 BASIC5.07□□□□□ -1.6
CopaQ8CIE6 Gm24198-201ENSMUST00000157812 108 ntBASIC5.07□□□□□ -1.6
CopaQ8CIE6 Gm24962-201ENSMUST00000157917 109 ntBASIC5.07□□□□□ -1.6
CopaQ8CIE6 Ear-ps9-201ENSMUST00000161963 460 ntBASIC5.07□□□□□ -1.6
CopaQ8CIE6 Gm2930-201ENSMUST00000170403 474 ntBASIC5.07□□□□□ -1.6
CopaQ8CIE6 Trav14n-1-201ENSMUST00000177578 340 ntAPPRIS ALT2 BASIC5.07□□□□□ -1.6
CopaQ8CIE6 Gm26954-201ENSMUST00000182106 622 ntTSL 3 BASIC5.07□□□□□ -1.6
CopaQ8CIE6 Trav14d-1-202ENSMUST00000187138 340 ntAPPRIS ALT2 BASIC5.07□□□□□ -1.6
CopaQ8CIE6 Gm29107-201ENSMUST00000190910 347 ntBASIC5.07□□□□□ -1.6
CopaQ8CIE6 Gm5285-201ENSMUST00000193089 666 ntBASIC5.07□□□□□ -1.6
CopaQ8CIE6 Gm43350-201ENSMUST00000196382 711 ntBASIC5.07□□□□□ -1.6
CopaQ8CIE6 C030038I04Rik-201ENSMUST00000207840 740 ntBASIC5.07□□□□□ -1.6
CopaQ8CIE6 AC124524.2-201ENSMUST00000223940 588 ntBASIC5.07□□□□□ -1.6
CopaQ8CIE6 AC137902.2-201ENSMUST00000227989 576 ntBASIC5.07□□□□□ -1.6
CopaQ8CIE6 Olfr1022-201ENSMUST00000054736 948 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
CopaQ8CIE6 Gm23452-201ENSMUST00000083327 107 ntBASIC5.07□□□□□ -1.6
CopaQ8CIE6 Olfr1170-201ENSMUST00000099831 951 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
CopaQ8CIE6 Gm37862-201ENSMUST00000193079 2533 ntBASIC5.07□□□□□ -1.6
CopaQ8CIE6 Prune2-201ENSMUST00000087689 12512 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
CopaQ8CIE6 Gm2396-202ENSMUST00000188232 3433 ntTSL 5 BASIC5.07□□□□□ -1.6
CopaQ8CIE6 Olfr695-201ENSMUST00000216868 3953 ntAPPRIS P1 TSL 5 BASIC5.06□□□□□ -1.6
CopaQ8CIE6 Scml2-203ENSMUST00000077375 3550 ntAPPRIS ALT2 TSL 1 (best) BASIC5.06□□□□□ -1.6
CopaQ8CIE6 Gm28183-201ENSMUST00000191321 1406 ntTSL 5 BASIC5.06□□□□□ -1.6
CopaQ8CIE6 Gm15638-201ENSMUST00000128159 2062 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
CopaQ8CIE6 Olfr965-203ENSMUST00000215164 1722 ntAPPRIS P1 TSL 5 BASIC5.06□□□□□ -1.6
CopaQ8CIE6 Gm43059-201ENSMUST00000202437 1388 ntBASIC5.06□□□□□ -1.6
CopaQ8CIE6 Gm43011-201ENSMUST00000197897 4433 ntBASIC5.06□□□□□ -1.6
CopaQ8CIE6 Igkv10-94-201ENSMUST00000103330 347 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
CopaQ8CIE6 Gm9733-201ENSMUST00000108361 618 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
CopaQ8CIE6 Gm13321-201ENSMUST00000117101 400 ntBASIC5.06□□□□□ -1.6
CopaQ8CIE6 Tcea1-ps1-201ENSMUST00000117942 904 ntBASIC5.06□□□□□ -1.6
CopaQ8CIE6 Gm11346-201ENSMUST00000118346 704 ntBASIC5.06□□□□□ -1.6
CopaQ8CIE6 Gm12717-201ENSMUST00000118427 983 ntBASIC5.06□□□□□ -1.6
CopaQ8CIE6 Gm6121-201ENSMUST00000119231 924 ntAPPRIS P1 TSL 5 BASIC5.06□□□□□ -1.6
CopaQ8CIE6 Gm14046-201ENSMUST00000119389 509 ntBASIC5.06□□□□□ -1.6
Retrieved 100 of 76,532 protein–RNA pairs in 87.2 ms