Protein–RNA interactions for Protein: Q8CDN8

Ccdc38, Coiled-coil domain-containing protein 38, mousemouse

Predictions only

Length 563 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc38Q8CDN8 Vmn1r104-201ENSMUST00000169689 924 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
Ccdc38Q8CDN8 Svs4-201ENSMUST00000017142 731 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
Ccdc38Q8CDN8 Gm22355-201ENSMUST00000175531 96 ntBASIC4.87□□□□□ -1.63
Ccdc38Q8CDN8 Spin2e-201ENSMUST00000179716 705 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
Ccdc38Q8CDN8 Mir6903-201ENSMUST00000183597 88 ntBASIC4.87□□□□□ -1.63
Ccdc38Q8CDN8 1700010I02Rik-201ENSMUST00000187729 438 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
Ccdc38Q8CDN8 Gm29133-201ENSMUST00000189155 885 ntAPPRIS P1 TSL 5 BASIC4.87□□□□□ -1.63
Ccdc38Q8CDN8 Gm21735-201ENSMUST00000190360 696 ntBASIC4.87□□□□□ -1.63
Ccdc38Q8CDN8 Gm29527-201ENSMUST00000190722 622 ntTSL 5 BASIC4.87□□□□□ -1.63
Ccdc38Q8CDN8 Gm29038-201ENSMUST00000191543 678 ntBASIC4.87□□□□□ -1.63
Ccdc38Q8CDN8 Gm38221-201ENSMUST00000195146 365 ntBASIC4.87□□□□□ -1.63
Ccdc38Q8CDN8 Gm18150-201ENSMUST00000195341 645 ntBASIC4.87□□□□□ -1.63
Ccdc38Q8CDN8 Gm36985-201ENSMUST00000195595 379 ntBASIC4.87□□□□□ -1.63
Ccdc38Q8CDN8 Gm42566-201ENSMUST00000197120 643 ntBASIC4.87□□□□□ -1.63
Ccdc38Q8CDN8 Tgif1-ps-201ENSMUST00000201864 736 ntBASIC4.87□□□□□ -1.63
Ccdc38Q8CDN8 Ociad2-206ENSMUST00000202012 876 ntTSL 5 BASIC4.87□□□□□ -1.63
Ccdc38Q8CDN8 2500002B13Rik-202ENSMUST00000210752 298 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
Ccdc38Q8CDN8 AC159819.1-201ENSMUST00000213911 328 ntBASIC4.87□□□□□ -1.63
Ccdc38Q8CDN8 AC133207.3-201ENSMUST00000217694 464 ntTSL 3 BASIC4.87□□□□□ -1.63
Ccdc38Q8CDN8 Gm5457-201ENSMUST00000022260 333 ntBASIC4.87□□□□□ -1.63
Ccdc38Q8CDN8 CT030194.1-201ENSMUST00000225507 532 ntBASIC4.87□□□□□ -1.63
Ccdc38Q8CDN8 CT030254.3-201ENSMUST00000225959 1231 ntBASIC4.87□□□□□ -1.63
Ccdc38Q8CDN8 AC139294.2-201ENSMUST00000227159 285 ntBASIC4.87□□□□□ -1.63
Ccdc38Q8CDN8 AC107369.1-201ENSMUST00000227373 860 ntBASIC4.87□□□□□ -1.63
Ccdc38Q8CDN8 Olfr1052-201ENSMUST00000054746 940 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
Ccdc38Q8CDN8 Olfr827-201ENSMUST00000058123 1058 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
Ccdc38Q8CDN8 Apoo-ps-201ENSMUST00000061241 586 ntBASIC4.87□□□□□ -1.63
Ccdc38Q8CDN8 mt-Nd1-201ENSMUST00000082392 957 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
Ccdc38Q8CDN8 Klra7-203ENSMUST00000088011 921 ntAPPRIS P3 TSL 1 (best) BASIC4.87□□□□□ -1.63
Ccdc38Q8CDN8 Lrp1b-201ENSMUST00000052550 16294 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
Ccdc38Q8CDN8 Olfr247-202ENSMUST00000215871 1983 ntAPPRIS P5 TSL 5 BASIC4.87□□□□□ -1.63
Ccdc38Q8CDN8 Vmn2r101-201ENSMUST00000171914 2574 ntAPPRIS P1 TSL 5 BASIC4.87□□□□□ -1.63
Ccdc38Q8CDN8 Usp9x-201ENSMUST00000089302 11887 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
Ccdc38Q8CDN8 Nlrp2-201ENSMUST00000045022 3404 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
Ccdc38Q8CDN8 4930510E17Rik-201ENSMUST00000034550 1639 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
Ccdc38Q8CDN8 Aspn-202ENSMUST00000177948 2329 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
Ccdc38Q8CDN8 Gm28940-201ENSMUST00000187929 1682 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
Ccdc38Q8CDN8 Ppef1-201ENSMUST00000071204 2483 ntAPPRIS P1 TSL 2 BASIC4.86□□□□□ -1.63
Ccdc38Q8CDN8 Gm37639-201ENSMUST00000191623 2785 ntBASIC4.86□□□□□ -1.63
Ccdc38Q8CDN8 Gm26387-201ENSMUST00000104238 132 ntBASIC4.86□□□□□ -1.63
Ccdc38Q8CDN8 Gm12067-201ENSMUST00000119755 1148 ntBASIC4.86□□□□□ -1.63
Ccdc38Q8CDN8 Mup-ps21-201ENSMUST00000119998 448 ntBASIC4.86□□□□□ -1.63
Ccdc38Q8CDN8 Gm11260-201ENSMUST00000121163 942 ntBASIC4.86□□□□□ -1.63
Ccdc38Q8CDN8 Gm13220-201ENSMUST00000121535 508 ntBASIC4.86□□□□□ -1.63
Ccdc38Q8CDN8 Gm12127-201ENSMUST00000123278 706 ntTSL 3 BASIC4.86□□□□□ -1.63
Ccdc38Q8CDN8 Gm12092-201ENSMUST00000125194 600 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
Ccdc38Q8CDN8 Gm12724-201ENSMUST00000140196 665 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
Ccdc38Q8CDN8 Gm23179-201ENSMUST00000158693 304 ntBASIC4.86□□□□□ -1.63
Ccdc38Q8CDN8 Gm16243-201ENSMUST00000160351 494 ntTSL 3 BASIC4.86□□□□□ -1.63
Ccdc38Q8CDN8 Vmn2r-ps35-201ENSMUST00000169206 831 ntBASIC4.86□□□□□ -1.63
Ccdc38Q8CDN8 Vmn1r-ps40-201ENSMUST00000172862 343 ntBASIC4.86□□□□□ -1.63
Ccdc38Q8CDN8 Gm26992-201ENSMUST00000182089 468 ntAPPRIS P1 TSL 2 BASIC4.86□□□□□ -1.63
Ccdc38Q8CDN8 Gm27254-201ENSMUST00000183926 517 ntBASIC4.86□□□□□ -1.63
Ccdc38Q8CDN8 Gm28976-201ENSMUST00000188070 144 ntBASIC4.86□□□□□ -1.63
Ccdc38Q8CDN8 Gm43774-201ENSMUST00000196327 878 ntBASIC4.86□□□□□ -1.63
Ccdc38Q8CDN8 Gm43491-201ENSMUST00000197133 784 ntBASIC4.86□□□□□ -1.63
Ccdc38Q8CDN8 Clec2g-205ENSMUST00000203405 967 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
Ccdc38Q8CDN8 Gm6230-201ENSMUST00000208077 780 ntBASIC4.86□□□□□ -1.63
Ccdc38Q8CDN8 Gm45499-201ENSMUST00000211656 280 ntBASIC4.86□□□□□ -1.63
Ccdc38Q8CDN8 Gm8106-201ENSMUST00000213123 523 ntBASIC4.86□□□□□ -1.63
Ccdc38Q8CDN8 AC154374.1-201ENSMUST00000215351 351 ntBASIC4.86□□□□□ -1.63
Ccdc38Q8CDN8 AC132237.2-201ENSMUST00000221702 1209 ntBASIC4.86□□□□□ -1.63
Ccdc38Q8CDN8 AC118006.1-201ENSMUST00000224211 501 ntBASIC4.86□□□□□ -1.63
Ccdc38Q8CDN8 Olfr347-201ENSMUST00000078761 943 ntAPPRIS P1 BASIC4.86□□□□□ -1.63
Ccdc38Q8CDN8 Olfr1450-201ENSMUST00000082006 978 ntAPPRIS P1 BASIC4.86□□□□□ -1.63
Ccdc38Q8CDN8 Defa36-201ENSMUST00000095424 420 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
Ccdc38Q8CDN8 Olfr639-202ENSMUST00000215653 6570 ntAPPRIS P1 TSL 5 BASIC4.86□□□□□ -1.63
Ccdc38Q8CDN8 Vmn1r169-203ENSMUST00000227547 2322 ntAPPRIS P1 BASIC4.86□□□□□ -1.63
Ccdc38Q8CDN8 Gm281-201ENSMUST00000144914 2952 ntAPPRIS P1 TSL 5 BASIC4.85□□□□□ -1.63
Ccdc38Q8CDN8 Gm23608-201ENSMUST00000104545 128 ntBASIC4.85□□□□□ -1.63
Ccdc38Q8CDN8 Vmn1r120-201ENSMUST00000105202 918 ntAPPRIS P1 BASIC4.85□□□□□ -1.63
Ccdc38Q8CDN8 Gm12789-202ENSMUST00000106915 495 ntAPPRIS P1 TSL 3 BASIC4.85□□□□□ -1.63
Ccdc38Q8CDN8 Smim8-203ENSMUST00000108132 864 ntAPPRIS P1 TSL 3 BASIC4.85□□□□□ -1.63
Ccdc38Q8CDN8 Gm14305-201ENSMUST00000108980 1167 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
Ccdc38Q8CDN8 Znrd1-201ENSMUST00000113669 742 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
Ccdc38Q8CDN8 Gm11366-201ENSMUST00000119279 429 ntBASIC4.85□□□□□ -1.63
Ccdc38Q8CDN8 Vmn1r-ps99-201ENSMUST00000120067 766 ntBASIC4.85□□□□□ -1.63
Ccdc38Q8CDN8 Olfr660-ps1-201ENSMUST00000121526 375 ntBASIC4.85□□□□□ -1.63
Ccdc38Q8CDN8 Gm12685-201ENSMUST00000121702 214 ntBASIC4.85□□□□□ -1.63
Ccdc38Q8CDN8 Gm13745-201ENSMUST00000121994 527 ntBASIC4.85□□□□□ -1.63
Ccdc38Q8CDN8 Gm24380-201ENSMUST00000122696 324 ntBASIC4.85□□□□□ -1.63
Ccdc38Q8CDN8 2310016D23Rik-201ENSMUST00000130082 388 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
Ccdc38Q8CDN8 Gm13874-201ENSMUST00000130680 809 ntTSL 5 BASIC4.85□□□□□ -1.63
Ccdc38Q8CDN8 Gm15591-201ENSMUST00000138539 627 ntTSL 5 BASIC4.85□□□□□ -1.63
Ccdc38Q8CDN8 Ugt2a2-202ENSMUST00000144144 929 ntTSL 2 BASIC4.85□□□□□ -1.63
Ccdc38Q8CDN8 Gm24113-201ENSMUST00000157477 276 ntBASIC4.85□□□□□ -1.63
Ccdc38Q8CDN8 Gm26171-201ENSMUST00000158422 131 ntBASIC4.85□□□□□ -1.63
Ccdc38Q8CDN8 Gm17133-201ENSMUST00000170636 289 ntTSL 3 BASIC4.85□□□□□ -1.63
Ccdc38Q8CDN8 Gm23638-201ENSMUST00000175073 126 ntBASIC4.85□□□□□ -1.63
Ccdc38Q8CDN8 Gm23158-201ENSMUST00000175076 126 ntBASIC4.85□□□□□ -1.63
Ccdc38Q8CDN8 Gm22907-201ENSMUST00000175198 126 ntBASIC4.85□□□□□ -1.63
Ccdc38Q8CDN8 Gm22625-201ENSMUST00000175382 126 ntBASIC4.85□□□□□ -1.63
Ccdc38Q8CDN8 Gm22875-201ENSMUST00000175449 126 ntBASIC4.85□□□□□ -1.63
Ccdc38Q8CDN8 Gm25197-201ENSMUST00000175516 126 ntBASIC4.85□□□□□ -1.63
Ccdc38Q8CDN8 Gm27857-201ENSMUST00000176930 126 ntBASIC4.85□□□□□ -1.63
Ccdc38Q8CDN8 Gm26268-201ENSMUST00000177685 126 ntBASIC4.85□□□□□ -1.63
Ccdc38Q8CDN8 Gm21756-201ENSMUST00000178380 930 ntBASIC4.85□□□□□ -1.63
Ccdc38Q8CDN8 Gm23681-201ENSMUST00000178821 126 ntBASIC4.85□□□□□ -1.63
Ccdc38Q8CDN8 Gm21405-201ENSMUST00000179024 930 ntBASIC4.85□□□□□ -1.63
Ccdc38Q8CDN8 Gm21820-201ENSMUST00000179056 1083 ntAPPRIS P1 BASIC4.85□□□□□ -1.63
Retrieved 100 of 76,532 protein–RNA pairs in 73.7 ms