Protein–RNA interactions for Protein: Q8CDL9

Ccdc87, Coiled-coil domain-containing protein 87, mousemouse

Predictions only

Length 855 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc87Q8CDL9 Atp6v1g3-201ENSMUST00000027643 1887 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
Ccdc87Q8CDL9 Gm42869-201ENSMUST00000199953 2121 ntBASIC5.36□□□□□ -1.55
Ccdc87Q8CDL9 Gm44860-201ENSMUST00000208473 2346 ntBASIC5.36□□□□□ -1.55
Ccdc87Q8CDL9 Vmn2r-ps123-201ENSMUST00000176763 2410 ntBASIC5.36□□□□□ -1.55
Ccdc87Q8CDL9 Gabra6-201ENSMUST00000020703 2436 ntAPPRIS P3 TSL 1 (best) BASIC5.36□□□□□ -1.55
Ccdc87Q8CDL9 Olfr1348-207ENSMUST00000209029 2696 ntAPPRIS P1 TSL 5 BASIC5.36□□□□□ -1.55
Ccdc87Q8CDL9 Gm21244-202ENSMUST00000189201 3115 ntAPPRIS P1 TSL 5 BASIC5.36□□□□□ -1.55
Ccdc87Q8CDL9 Gm2099-202ENSMUST00000223310 3341 ntBASIC5.36□□□□□ -1.55
Ccdc87Q8CDL9 Vmn1r217-202ENSMUST00000227110 9888 ntAPPRIS P1 BASIC5.35□□□□□ -1.55
Ccdc87Q8CDL9 Olfr198-202ENSMUST00000208244 2200 ntAPPRIS P1 TSL 2 BASIC5.35□□□□□ -1.55
Ccdc87Q8CDL9 Gm15638-201ENSMUST00000128159 2062 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
Ccdc87Q8CDL9 Gm2912-201ENSMUST00000223472 1799 ntTSL 5 BASIC5.35□□□□□ -1.55
Ccdc87Q8CDL9 Rgs21-202ENSMUST00000184189 1674 ntAPPRIS P1 TSL 5 BASIC5.35□□□□□ -1.55
Ccdc87Q8CDL9 Pih1d3-201ENSMUST00000027230 1451 ntAPPRIS P1 BASIC5.35□□□□□ -1.55
Ccdc87Q8CDL9 Gm19074-201ENSMUST00000218915 1429 ntBASIC5.35□□□□□ -1.55
Ccdc87Q8CDL9 Zfp78-201ENSMUST00000086323 1443 ntAPPRIS ALT2 TSL 5 BASIC5.35□□□□□ -1.55
Ccdc87Q8CDL9 AC124556.1-201ENSMUST00000218256 1319 ntBASIC5.35□□□□□ -1.55
Ccdc87Q8CDL9 Mir467h-201ENSMUST00000116759 121 ntBASIC5.35□□□□□ -1.55
Ccdc87Q8CDL9 Rpl38-ps2-201ENSMUST00000117356 213 ntBASIC5.35□□□□□ -1.55
Ccdc87Q8CDL9 Gm8129-201ENSMUST00000118230 213 ntBASIC5.35□□□□□ -1.55
Ccdc87Q8CDL9 Gm8858-201ENSMUST00000118259 342 ntBASIC5.35□□□□□ -1.55
Ccdc87Q8CDL9 Olfr381-202ENSMUST00000119863 1065 ntAPPRIS P1 TSL 3 BASIC5.35□□□□□ -1.55
Ccdc87Q8CDL9 Gm12808-201ENSMUST00000120597 404 ntBASIC5.35□□□□□ -1.55
Ccdc87Q8CDL9 Gm6031-201ENSMUST00000121314 1054 ntBASIC5.35□□□□□ -1.55
Ccdc87Q8CDL9 Gm25176-201ENSMUST00000122640 125 ntBASIC5.35□□□□□ -1.55
Ccdc87Q8CDL9 Gm24371-201ENSMUST00000122662 267 ntBASIC5.35□□□□□ -1.55
Ccdc87Q8CDL9 Gm12730-201ENSMUST00000125277 291 ntTSL 5 BASIC5.35□□□□□ -1.55
Ccdc87Q8CDL9 4930556I23Rik-201ENSMUST00000160659 560 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
Ccdc87Q8CDL9 Vmn1r167-201ENSMUST00000164527 948 ntAPPRIS P1 BASIC5.35□□□□□ -1.55
Ccdc87Q8CDL9 Sult2a4-202ENSMUST00000165167 964 ntAPPRIS P2 TSL 5 BASIC5.35□□□□□ -1.55
Ccdc87Q8CDL9 Gm22776-201ENSMUST00000178634 94 ntBASIC5.35□□□□□ -1.55
Ccdc87Q8CDL9 Gm23767-201ENSMUST00000179278 94 ntBASIC5.35□□□□□ -1.55
Ccdc87Q8CDL9 Gm26731-201ENSMUST00000180683 543 ntBASIC5.35□□□□□ -1.55
Ccdc87Q8CDL9 Mir6963-201ENSMUST00000183535 71 ntBASIC5.35□□□□□ -1.55
Ccdc87Q8CDL9 Gm29563-201ENSMUST00000187249 496 ntBASIC5.35□□□□□ -1.55
Ccdc87Q8CDL9 Il19-203ENSMUST00000187410 1135 ntAPPRIS P1 TSL 5 BASIC5.35□□□□□ -1.55
Ccdc87Q8CDL9 Gm2147-201ENSMUST00000193588 639 ntBASIC5.35□□□□□ -1.55
Ccdc87Q8CDL9 Igkv15-101-201ENSMUST00000195917 299 ntBASIC5.35□□□□□ -1.55
Ccdc87Q8CDL9 Gm43582-201ENSMUST00000196149 343 ntBASIC5.35□□□□□ -1.55
Ccdc87Q8CDL9 Ighv1-79-201ENSMUST00000200152 350 ntBASIC5.35□□□□□ -1.55
Ccdc87Q8CDL9 4930487D11Rik-201ENSMUST00000201983 295 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
Ccdc87Q8CDL9 Gm18410-201ENSMUST00000207199 577 ntBASIC5.35□□□□□ -1.55
Ccdc87Q8CDL9 Gm44724-202ENSMUST00000208251 531 ntTSL 5 BASIC5.35□□□□□ -1.55
Ccdc87Q8CDL9 4933411E02Rik-201ENSMUST00000216779 1030 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
Ccdc87Q8CDL9 AC164576.1-201ENSMUST00000218783 693 ntTSL 5 BASIC5.35□□□□□ -1.55
Ccdc87Q8CDL9 Gm32443-202ENSMUST00000220011 773 ntTSL 5 BASIC5.35□□□□□ -1.55
Ccdc87Q8CDL9 AC142227.2-201ENSMUST00000220675 400 ntTSL 5 BASIC5.35□□□□□ -1.55
Ccdc87Q8CDL9 Rpl29-ps2-203ENSMUST00000222043 1036 ntTSL 5 BASIC5.35□□□□□ -1.55
Ccdc87Q8CDL9 AC154738.2-201ENSMUST00000227403 1110 ntBASIC5.35□□□□□ -1.55
Ccdc87Q8CDL9 AC154806.4-201ENSMUST00000227406 439 ntBASIC5.35□□□□□ -1.55
Ccdc87Q8CDL9 AC192088.3-201ENSMUST00000227858 831 ntBASIC5.35□□□□□ -1.55
Ccdc87Q8CDL9 Pdcd10-201ENSMUST00000029424 907 ntTSL 5 BASIC5.35□□□□□ -1.55
Ccdc87Q8CDL9 Clec2j-201ENSMUST00000032517 515 ntBASIC5.35□□□□□ -1.55
Ccdc87Q8CDL9 Olfr968-201ENSMUST00000075928 1027 ntAPPRIS P1 BASIC5.35□□□□□ -1.55
Ccdc87Q8CDL9 CT009754.2-201ENSMUST00000221683 3661 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
Ccdc87Q8CDL9 Rnf2-204ENSMUST00000187048 3201 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
Ccdc87Q8CDL9 Acsm3-204ENSMUST00000106528 2755 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
Ccdc87Q8CDL9 Zfp950-207ENSMUST00000180544 2568 ntAPPRIS P1 TSL 3 BASIC5.35□□□□□ -1.55
Ccdc87Q8CDL9 Vmn1r84-201ENSMUST00000086228 2452 ntAPPRIS P2 BASIC5.35□□□□□ -1.55
Ccdc87Q8CDL9 Trps1-202ENSMUST00000165201 9859 ntAPPRIS P3 TSL 1 (best) BASIC5.35□□□□□ -1.55
Ccdc87Q8CDL9 Usp46-201ENSMUST00000068058 4557 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
Ccdc87Q8CDL9 B230206I08Rik-201ENSMUST00000207479 3191 ntBASIC5.34□□□□□ -1.55
Ccdc87Q8CDL9 Gm42548-201ENSMUST00000202669 3933 ntBASIC5.34□□□□□ -1.55
Ccdc87Q8CDL9 Gm37900-201ENSMUST00000195510 3805 ntBASIC5.34□□□□□ -1.55
Ccdc87Q8CDL9 AC122382.2-201ENSMUST00000225128 3602 ntBASIC5.34□□□□□ -1.55
Ccdc87Q8CDL9 Vmn1r210-203ENSMUST00000226294 3500 ntAPPRIS P1 BASIC5.34□□□□□ -1.55
Ccdc87Q8CDL9 Entpd1-201ENSMUST00000112231 4221 ntAPPRIS P3 TSL 1 (best) BASIC5.34□□□□□ -1.55
Ccdc87Q8CDL9 Gm37509-201ENSMUST00000194867 3169 ntBASIC5.34□□□□□ -1.55
Ccdc87Q8CDL9 Gm22273-201ENSMUST00000104040 132 ntBASIC5.34□□□□□ -1.55
Ccdc87Q8CDL9 Gnrh1-201ENSMUST00000111095 486 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
Ccdc87Q8CDL9 Gm14790-201ENSMUST00000117760 1293 ntBASIC5.34□□□□□ -1.55
Ccdc87Q8CDL9 Olfr637-ps1-201ENSMUST00000120386 471 ntBASIC5.34□□□□□ -1.55
Ccdc87Q8CDL9 Gm24551-201ENSMUST00000158645 92 ntBASIC5.34□□□□□ -1.55
Ccdc87Q8CDL9 Gm7609-204ENSMUST00000161424 461 ntBASIC5.34□□□□□ -1.55
Ccdc87Q8CDL9 Gm3339-201ENSMUST00000163462 475 ntBASIC5.34□□□□□ -1.55
Ccdc87Q8CDL9 Gm3298-201ENSMUST00000165289 516 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
Ccdc87Q8CDL9 Gm7316-201ENSMUST00000165395 445 ntBASIC5.34□□□□□ -1.55
Ccdc87Q8CDL9 Gm8206-202ENSMUST00000168733 516 ntAPPRIS P1 TSL 5 BASIC5.34□□□□□ -1.55
Ccdc87Q8CDL9 Gm8265-201ENSMUST00000170469 475 ntAPPRIS P1 TSL 5 BASIC5.34□□□□□ -1.55
Ccdc87Q8CDL9 Gm17153-201ENSMUST00000171314 490 ntBASIC5.34□□□□□ -1.55
Ccdc87Q8CDL9 Gm42936-201ENSMUST00000174019 652 ntTSL 3 BASIC5.34□□□□□ -1.55
Ccdc87Q8CDL9 Gm18417-201ENSMUST00000176564 648 ntBASIC5.34□□□□□ -1.55
Ccdc87Q8CDL9 Gm21834-201ENSMUST00000178907 453 ntAPPRIS P1 BASIC5.34□□□□□ -1.55
Ccdc87Q8CDL9 Gm10267-202ENSMUST00000181652 341 ntAPPRIS P2 TSL 5 BASIC5.34□□□□□ -1.55
Ccdc87Q8CDL9 Rian-217ENSMUST00000183266 687 ntTSL 3 BASIC5.34□□□□□ -1.55
Ccdc87Q8CDL9 Gm29596-201ENSMUST00000185710 385 ntBASIC5.34□□□□□ -1.55
Ccdc87Q8CDL9 AV026068-202ENSMUST00000185793 486 ntTSL 2 BASIC5.34□□□□□ -1.55
Ccdc87Q8CDL9 D530049I02Rik-201ENSMUST00000186582 562 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
Ccdc87Q8CDL9 Gm37641-201ENSMUST00000193837 239 ntBASIC5.34□□□□□ -1.55
Ccdc87Q8CDL9 Il6-202ENSMUST00000195978 651 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
Ccdc87Q8CDL9 Gm18867-201ENSMUST00000198022 1179 ntBASIC5.34□□□□□ -1.55
Ccdc87Q8CDL9 Gm42896-201ENSMUST00000201249 1113 ntBASIC5.34□□□□□ -1.55
Ccdc87Q8CDL9 Gm44634-201ENSMUST00000206119 152 ntBASIC5.34□□□□□ -1.55
Ccdc87Q8CDL9 Gm45215-201ENSMUST00000206407 395 ntBASIC5.34□□□□□ -1.55
Ccdc87Q8CDL9 Gm33756-201ENSMUST00000211358 636 ntTSL 5 BASIC5.34□□□□□ -1.55
Ccdc87Q8CDL9 Gm18850-201ENSMUST00000211578 388 ntBASIC5.34□□□□□ -1.55
Ccdc87Q8CDL9 AC157515.1-201ENSMUST00000220953 450 ntBASIC5.34□□□□□ -1.55
Ccdc87Q8CDL9 AC120540.1-201ENSMUST00000221879 324 ntBASIC5.34□□□□□ -1.55
Ccdc87Q8CDL9 3830408C21Rik-203ENSMUST00000224293 822 ntBASIC5.34□□□□□ -1.55
Ccdc87Q8CDL9 AV026068-231ENSMUST00000225862 482 ntBASIC5.34□□□□□ -1.55
Retrieved 100 of 76,532 protein–RNA pairs in 70.1 ms