Protein–RNA interactions for Protein: Q6PDX6

Rnf220, E3 ubiquitin-protein ligase Rnf220, mousemouse

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf220Q6PDX6 Gm13743-201ENSMUST00000121486 724 ntBASIC5.07□□□□□ -1.6
Rnf220Q6PDX6 Gm12732-201ENSMUST00000121688 180 ntBASIC5.07□□□□□ -1.6
Rnf220Q6PDX6 Gm11834-201ENSMUST00000122257 585 ntBASIC5.07□□□□□ -1.6
Rnf220Q6PDX6 n-R5s207-201ENSMUST00000122497 118 ntBASIC5.07□□□□□ -1.6
Rnf220Q6PDX6 Gm12971-201ENSMUST00000154720 511 ntTSL 5 BASIC5.07□□□□□ -1.6
Rnf220Q6PDX6 Gm26170-201ENSMUST00000158419 148 ntBASIC5.07□□□□□ -1.6
Rnf220Q6PDX6 Gm24682-201ENSMUST00000158764 137 ntBASIC5.07□□□□□ -1.6
Rnf220Q6PDX6 Gm23648-201ENSMUST00000180301 107 ntBASIC5.07□□□□□ -1.6
Rnf220Q6PDX6 Gm37191-201ENSMUST00000193346 388 ntBASIC5.07□□□□□ -1.6
Rnf220Q6PDX6 Gm9236-201ENSMUST00000196892 587 ntBASIC5.07□□□□□ -1.6
Rnf220Q6PDX6 Mark1-ps1-201ENSMUST00000198516 717 ntBASIC5.07□□□□□ -1.6
Rnf220Q6PDX6 Gm42164-201ENSMUST00000198881 379 ntBASIC5.07□□□□□ -1.6
Rnf220Q6PDX6 Gm42828-201ENSMUST00000199669 469 ntBASIC5.07□□□□□ -1.6
Rnf220Q6PDX6 AC120011.1-201ENSMUST00000202147 744 ntBASIC5.07□□□□□ -1.6
Rnf220Q6PDX6 Gm9278-201ENSMUST00000205508 553 ntBASIC5.07□□□□□ -1.6
Rnf220Q6PDX6 Gm29754-201ENSMUST00000206269 358 ntBASIC5.07□□□□□ -1.6
Rnf220Q6PDX6 Gm45596-201ENSMUST00000209279 434 ntBASIC5.07□□□□□ -1.6
Rnf220Q6PDX6 Olfr897-ps1-201ENSMUST00000213589 935 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
Rnf220Q6PDX6 Gm31432-201ENSMUST00000214727 538 ntTSL 5 BASIC5.07□□□□□ -1.6
Rnf220Q6PDX6 Fkbp1b-202ENSMUST00000219880 246 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
Rnf220Q6PDX6 4930529N20Rik-201ENSMUST00000220538 639 ntTSL 3 BASIC5.07□□□□□ -1.6
Rnf220Q6PDX6 AC154224.1-201ENSMUST00000224367 403 ntBASIC5.07□□□□□ -1.6
Rnf220Q6PDX6 AC133101.1-201ENSMUST00000226939 1199 ntBASIC5.07□□□□□ -1.6
Rnf220Q6PDX6 Olfr478-201ENSMUST00000049719 945 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
Rnf220Q6PDX6 Olfr1359-201ENSMUST00000077843 991 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
Rnf220Q6PDX6 Wdr83os-201ENSMUST00000079764 922 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
Rnf220Q6PDX6 Gm24622-201ENSMUST00000082619 162 ntBASIC5.07□□□□□ -1.6
Rnf220Q6PDX6 Gm23506-201ENSMUST00000083077 107 ntBASIC5.07□□□□□ -1.6
Rnf220Q6PDX6 Gm23502-201ENSMUST00000083902 145 ntBASIC5.07□□□□□ -1.6
Rnf220Q6PDX6 Olfr599-201ENSMUST00000098201 1050 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
Rnf220Q6PDX6 Olfr1253-201ENSMUST00000099765 957 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
Rnf220Q6PDX6 Gm43283-201ENSMUST00000199138 2548 ntBASIC5.07□□□□□ -1.6
Rnf220Q6PDX6 Rsrc2-210ENSMUST00000182489 1665 ntTSL 5 BASIC5.07□□□□□ -1.6
Rnf220Q6PDX6 Il1rapl2-201ENSMUST00000075471 2061 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
Rnf220Q6PDX6 Gm34885-201ENSMUST00000217440 4070 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
Rnf220Q6PDX6 Vmn1r39-207ENSMUST00000228862 2398 ntAPPRIS P2 BASIC5.07□□□□□ -1.6
Rnf220Q6PDX6 Btbd35f1-201ENSMUST00000178070 1955 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
Rnf220Q6PDX6 Vmn1r52-207ENSMUST00000228394 3069 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
Rnf220Q6PDX6 AC147639.2-202ENSMUST00000224834 1545 ntBASIC5.07□□□□□ -1.6
Rnf220Q6PDX6 Zfp950-204ENSMUST00000143264 4825 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
Rnf220Q6PDX6 Gm12794-201ENSMUST00000052027 1452 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
Rnf220Q6PDX6 Gm5444-201ENSMUST00000065956 2468 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
Rnf220Q6PDX6 Gm26886-204ENSMUST00000181772 2085 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
Rnf220Q6PDX6 Olfr1226-206ENSMUST00000217601 2670 ntAPPRIS P1 TSL 5 BASIC5.06□□□□□ -1.6
Rnf220Q6PDX6 Btbd35f7-201ENSMUST00000105007 1960 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
Rnf220Q6PDX6 Vmn2r83-201ENSMUST00000167976 2610 ntAPPRIS P1 TSL 5 BASIC5.06□□□□□ -1.6
Rnf220Q6PDX6 Capn6-201ENSMUST00000087316 3561 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
Rnf220Q6PDX6 Mir676-201ENSMUST00000102443 89 ntBASIC5.06□□□□□ -1.6
Rnf220Q6PDX6 Mir883a-201ENSMUST00000104824 76 ntBASIC5.06□□□□□ -1.6
Rnf220Q6PDX6 Gm15140-201ENSMUST00000112565 984 ntAPPRIS P1 TSL 2 BASIC5.06□□□□□ -1.6
Rnf220Q6PDX6 Olfr133-201ENSMUST00000113636 1090 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
Rnf220Q6PDX6 Rpl38-ps2-201ENSMUST00000117356 213 ntBASIC5.06□□□□□ -1.6
Rnf220Q6PDX6 Tex35-202ENSMUST00000118207 912 ntAPPRIS P3 TSL 1 (best) BASIC5.06□□□□□ -1.6
Rnf220Q6PDX6 Gm8129-201ENSMUST00000118230 213 ntBASIC5.06□□□□□ -1.6
Rnf220Q6PDX6 Gm14783-201ENSMUST00000118900 663 ntBASIC5.06□□□□□ -1.6
Rnf220Q6PDX6 Gm15660-201ENSMUST00000118997 478 ntBASIC5.06□□□□□ -1.6
Rnf220Q6PDX6 Atp5l2-ps-201ENSMUST00000120130 312 ntBASIC5.06□□□□□ -1.6
Rnf220Q6PDX6 Gm14531-201ENSMUST00000120845 285 ntBASIC5.06□□□□□ -1.6
Rnf220Q6PDX6 Gm11321-201ENSMUST00000121257 902 ntBASIC5.06□□□□□ -1.6
Rnf220Q6PDX6 Gm15591-201ENSMUST00000138539 627 ntTSL 5 BASIC5.06□□□□□ -1.6
Rnf220Q6PDX6 Gm10057-201ENSMUST00000144098 984 ntAPPRIS P1 TSL 2 BASIC5.06□□□□□ -1.6
Rnf220Q6PDX6 1700095A21Rik-201ENSMUST00000145269 1069 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
Rnf220Q6PDX6 Gm12914-201ENSMUST00000148635 305 ntTSL 5 BASIC5.06□□□□□ -1.6
Rnf220Q6PDX6 Gm25555-201ENSMUST00000158078 111 ntBASIC5.06□□□□□ -1.6
Rnf220Q6PDX6 Gm25227-201ENSMUST00000158204 112 ntBASIC5.06□□□□□ -1.6
Rnf220Q6PDX6 Gm16146-201ENSMUST00000160306 439 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
Rnf220Q6PDX6 Smim9-203ENSMUST00000165080 414 ntAPPRIS P1 TSL 3 BASIC5.06□□□□□ -1.6
Rnf220Q6PDX6 Gm17023-201ENSMUST00000165885 448 ntTSL 2 BASIC5.06□□□□□ -1.6
Rnf220Q6PDX6 Fth-ps2-201ENSMUST00000168364 516 ntBASIC5.06□□□□□ -1.6
Rnf220Q6PDX6 Gm20657-201ENSMUST00000177079 515 ntBASIC5.06□□□□□ -1.6
Rnf220Q6PDX6 4921511M17Rik-201ENSMUST00000177994 984 ntAPPRIS P1 TSL 2 BASIC5.06□□□□□ -1.6
Rnf220Q6PDX6 Samt1-201ENSMUST00000178342 984 ntAPPRIS P1 TSL 2 BASIC5.06□□□□□ -1.6
Rnf220Q6PDX6 Samt1-202ENSMUST00000178698 834 ntAPPRIS P1 TSL 5 BASIC5.06□□□□□ -1.6
Rnf220Q6PDX6 4921511M17Rik-202ENSMUST00000179369 834 ntAPPRIS P1 TSL 5 BASIC5.06□□□□□ -1.6
Rnf220Q6PDX6 Gm29031-201ENSMUST00000185316 614 ntBASIC5.06□□□□□ -1.6
Rnf220Q6PDX6 Gm29000-201ENSMUST00000185444 614 ntBASIC5.06□□□□□ -1.6
Rnf220Q6PDX6 Gm28204-201ENSMUST00000185934 614 ntBASIC5.06□□□□□ -1.6
Rnf220Q6PDX6 Gm28595-201ENSMUST00000186223 437 ntTSL 5 BASIC5.06□□□□□ -1.6
Rnf220Q6PDX6 Gm28290-201ENSMUST00000186505 614 ntBASIC5.06□□□□□ -1.6
Rnf220Q6PDX6 Gm28161-201ENSMUST00000186669 614 ntBASIC5.06□□□□□ -1.6
Rnf220Q6PDX6 Gm29545-201ENSMUST00000188878 694 ntBASIC5.06□□□□□ -1.6
Rnf220Q6PDX6 Tardbp-223ENSMUST00000189048 1096 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
Rnf220Q6PDX6 Gm28749-209ENSMUST00000189599 614 ntBASIC5.06□□□□□ -1.6
Rnf220Q6PDX6 Gm17981-201ENSMUST00000191109 739 ntBASIC5.06□□□□□ -1.6
Rnf220Q6PDX6 Gm32391-201ENSMUST00000191839 540 ntTSL 2 BASIC5.06□□□□□ -1.6
Rnf220Q6PDX6 Gm37475-201ENSMUST00000193107 1015 ntBASIC5.06□□□□□ -1.6
Rnf220Q6PDX6 Gm36998-201ENSMUST00000193205 704 ntBASIC5.06□□□□□ -1.6
Rnf220Q6PDX6 Gm3351-201ENSMUST00000193454 505 ntBASIC5.06□□□□□ -1.6
Rnf220Q6PDX6 Gm33163-201ENSMUST00000194504 614 ntBASIC5.06□□□□□ -1.6
Rnf220Q6PDX6 Csn1s2a-202ENSMUST00000196585 762 ntAPPRIS ALT2 TSL 3 BASIC5.06□□□□□ -1.6
Rnf220Q6PDX6 Gm43762-201ENSMUST00000201521 295 ntBASIC5.06□□□□□ -1.6
Rnf220Q6PDX6 Gm44538-201ENSMUST00000205615 348 ntBASIC5.06□□□□□ -1.6
Rnf220Q6PDX6 Gm45171-201ENSMUST00000206360 736 ntBASIC5.06□□□□□ -1.6
Rnf220Q6PDX6 Spcs2-202ENSMUST00000207063 727 ntTSL 2 BASIC5.06□□□□□ -1.6
Rnf220Q6PDX6 Gm30646-201ENSMUST00000207662 180 ntBASIC5.06□□□□□ -1.6
Rnf220Q6PDX6 Gm45439-201ENSMUST00000211723 359 ntBASIC5.06□□□□□ -1.6
Rnf220Q6PDX6 Olfr966-ps1-201ENSMUST00000214875 577 ntBASIC5.06□□□□□ -1.6
Rnf220Q6PDX6 Gm18252-202ENSMUST00000214886 409 ntTSL 5 BASIC5.06□□□□□ -1.6
Rnf220Q6PDX6 Gm39302-201ENSMUST00000215184 636 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
Rnf220Q6PDX6 AC123067.1-201ENSMUST00000217711 462 ntBASIC5.06□□□□□ -1.6
Retrieved 100 of 76,532 protein–RNA pairs in 94.4 ms