Protein–RNA interactions for Protein: Q61371

Ift88, Intraflagellar transport protein 88 homolog, mousemouse

Predictions only

Length 824 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ift88Q61371 AC144772.3-201ENSMUST00000228829 3126 ntBASIC5.21□□□□□ -1.58
Ift88Q61371 Ints12-201ENSMUST00000029650 3101 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
Ift88Q61371 Arhgef6-201ENSMUST00000033468 4569 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
Ift88Q61371 Nfia-204ENSMUST00000107057 8913 ntTSL 5 BASIC5.21□□□□□ -1.58
Ift88Q61371 Gm13230-201ENSMUST00000120870 1575 ntBASIC5.21□□□□□ -1.58
Ift88Q61371 Vmn1r210-203ENSMUST00000226294 3500 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
Ift88Q61371 Gm42729-201ENSMUST00000201770 2930 ntBASIC5.2□□□□□ -1.58
Ift88Q61371 Gm43605-201ENSMUST00000199663 3426 ntBASIC5.2□□□□□ -1.58
Ift88Q61371 Gm30524-201ENSMUST00000204271 2300 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
Ift88Q61371 Btbd35f4-201ENSMUST00000105011 1491 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
Ift88Q61371 Gm44109-201ENSMUST00000204514 1954 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
Ift88Q61371 Mmp1a-202ENSMUST00000217651 2011 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
Ift88Q61371 Spp1-204ENSMUST00000112747 1507 ntAPPRIS P3 TSL 1 (best) BASIC5.2□□□□□ -1.58
Ift88Q61371 Trav5-1-201ENSMUST00000103570 343 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
Ift88Q61371 Gm12760-201ENSMUST00000117861 482 ntBASIC5.2□□□□□ -1.58
Ift88Q61371 Gm11984-201ENSMUST00000118142 766 ntBASIC5.2□□□□□ -1.58
Ift88Q61371 Rpl23a-ps14-201ENSMUST00000118777 424 ntBASIC5.2□□□□□ -1.58
Ift88Q61371 Gm11822-201ENSMUST00000119177 415 ntBASIC5.2□□□□□ -1.58
Ift88Q61371 Gm7485-201ENSMUST00000119502 1109 ntBASIC5.2□□□□□ -1.58
Ift88Q61371 Olfr1298-201ENSMUST00000119566 939 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
Ift88Q61371 Gm6305-201ENSMUST00000121027 1012 ntBASIC5.2□□□□□ -1.58
Ift88Q61371 Gm16412-201ENSMUST00000121602 273 ntBASIC5.2□□□□□ -1.58
Ift88Q61371 Pdcl2-202ENSMUST00000122213 1049 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
Ift88Q61371 Gm25293-201ENSMUST00000122792 285 ntBASIC5.2□□□□□ -1.58
Ift88Q61371 Tctex1d1-203ENSMUST00000125417 859 ntAPPRIS ALT2 TSL 5 BASIC5.2□□□□□ -1.58
Ift88Q61371 C030037F17Rik-201ENSMUST00000155211 406 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
Ift88Q61371 Gm25979-201ENSMUST00000157177 138 ntBASIC5.2□□□□□ -1.58
Ift88Q61371 Gm23059-201ENSMUST00000158978 107 ntBASIC5.2□□□□□ -1.58
Ift88Q61371 Gm10177-202ENSMUST00000161698 207 ntBASIC5.2□□□□□ -1.58
Ift88Q61371 Prl3d2-202ENSMUST00000164964 675 ntAPPRIS ALT2 TSL 1 (best) BASIC5.2□□□□□ -1.58
Ift88Q61371 Gm5929-201ENSMUST00000166883 487 ntBASIC5.2□□□□□ -1.58
Ift88Q61371 Mog-202ENSMUST00000167275 627 ntAPPRIS ALT2 TSL 1 (best) BASIC5.2□□□□□ -1.58
Ift88Q61371 Gm17160-201ENSMUST00000170645 260 ntTSL 3 BASIC5.2□□□□□ -1.58
Ift88Q61371 Vmn1r7-201ENSMUST00000176252 1219 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
Ift88Q61371 Gm23145-201ENSMUST00000178912 79 ntBASIC5.2□□□□□ -1.58
Ift88Q61371 Rpl23a-ps12-201ENSMUST00000179178 468 ntBASIC5.2□□□□□ -1.58
Ift88Q61371 Gm26915-201ENSMUST00000183080 748 ntBASIC5.2□□□□□ -1.58
Ift88Q61371 Mir7012-201ENSMUST00000183900 64 ntBASIC5.2□□□□□ -1.58
Ift88Q61371 Gm6075-201ENSMUST00000186816 486 ntBASIC5.2□□□□□ -1.58
Ift88Q61371 Gm37070-201ENSMUST00000193272 460 ntBASIC5.2□□□□□ -1.58
Ift88Q61371 Gm44319-201ENSMUST00000196974 93 ntBASIC5.2□□□□□ -1.58
Ift88Q61371 Csn1s2a-209ENSMUST00000200322 797 ntAPPRIS ALT2 TSL 2 BASIC5.2□□□□□ -1.58
Ift88Q61371 1110060G06Rik-201ENSMUST00000200372 499 ntBASIC5.2□□□□□ -1.58
Ift88Q61371 Tas2r142-ps5-201ENSMUST00000204651 929 ntBASIC5.2□□□□□ -1.58
Ift88Q61371 Gm17838-201ENSMUST00000205872 876 ntBASIC5.2□□□□□ -1.58
Ift88Q61371 Gm44893-201ENSMUST00000207259 443 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
Ift88Q61371 C030038I04Rik-201ENSMUST00000207840 740 ntBASIC5.2□□□□□ -1.58
Ift88Q61371 Olfr1470-ps1-201ENSMUST00000208620 949 ntBASIC5.2□□□□□ -1.58
Ift88Q61371 Gm19599-201ENSMUST00000218898 358 ntBASIC5.2□□□□□ -1.58
Ift88Q61371 Vmn2r-ps92-201ENSMUST00000220242 388 ntBASIC5.2□□□□□ -1.58
Ift88Q61371 Aoah-202ENSMUST00000221982 919 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
Ift88Q61371 Gm40658-203ENSMUST00000222210 1070 ntTSL 5 BASIC5.2□□□□□ -1.58
Ift88Q61371 AC154552.5-201ENSMUST00000222352 207 ntBASIC5.2□□□□□ -1.58
Ift88Q61371 Gm2544-201ENSMUST00000222702 756 ntBASIC5.2□□□□□ -1.58
Ift88Q61371 AC154552.2-201ENSMUST00000223117 794 ntTSL 5 BASIC5.2□□□□□ -1.58
Ift88Q61371 AC117656.3-205ENSMUST00000224606 1205 ntBASIC5.2□□□□□ -1.58
Ift88Q61371 Gngt1-201ENSMUST00000031673 1183 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
Ift88Q61371 Olfr1022-201ENSMUST00000054736 948 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
Ift88Q61371 Gm10916-201ENSMUST00000080330 483 ntBASIC5.2□□□□□ -1.58
Ift88Q61371 Gm23300-201ENSMUST00000082712 125 ntBASIC5.2□□□□□ -1.58
Ift88Q61371 Gm26064-201ENSMUST00000083381 109 ntBASIC5.2□□□□□ -1.58
Ift88Q61371 Gm22864-201ENSMUST00000083950 130 ntBASIC5.2□□□□□ -1.58
Ift88Q61371 Wfdc9-201ENSMUST00000099095 252 ntAPPRIS P1 TSL 5 BASIC5.2□□□□□ -1.58
Ift88Q61371 Olfr1242-202ENSMUST00000111540 2189 ntAPPRIS P1 TSL 3 BASIC5.2□□□□□ -1.58
Ift88Q61371 Olfr1458-202ENSMUST00000215160 1914 ntAPPRIS P5 TSL 5 BASIC5.2□□□□□ -1.58
Ift88Q61371 Ralgapa1-211ENSMUST00000220367 7473 ntAPPRIS ALT2 TSL 5 BASIC5.2□□□□□ -1.58
Ift88Q61371 AC102431.1-201ENSMUST00000223773 1449 ntBASIC5.2□□□□□ -1.58
Ift88Q61371 Vmn1r171-205ENSMUST00000226771 2718 ntAPPRIS ALT2 BASIC5.2□□□□□ -1.58
Ift88Q61371 A230057D06Rik-203ENSMUST00000208953 3357 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
Ift88Q61371 Rgs7-207ENSMUST00000195324 2209 ntAPPRIS ALT2 TSL 5 BASIC5.2□□□□□ -1.58
Ift88Q61371 Gm20756-201ENSMUST00000201080 1595 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
Ift88Q61371 6720489N17Rik-202ENSMUST00000201563 2640 ntAPPRIS P2 TSL 1 (best) BASIC5.2□□□□□ -1.58
Ift88Q61371 Cftr-201ENSMUST00000045706 6303 ntAPPRIS P2 TSL 1 (best) BASIC5.2□□□□□ -1.58
Ift88Q61371 Hbp1-206ENSMUST00000176103 1319 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
Ift88Q61371 AC120153.1-201ENSMUST00000226502 1311 ntBASIC5.2□□□□□ -1.58
Ift88Q61371 Fat3-205ENSMUST00000217308 18760 ntAPPRIS P1 TSL 5 BASIC5.2□□□□□ -1.58
Ift88Q61371 Gm4166-201ENSMUST00000220893 2996 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
Ift88Q61371 Vmn2r112-201ENSMUST00000097381 2574 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
Ift88Q61371 Olfr1487-205ENSMUST00000217061 4080 ntAPPRIS P1 TSL 5 BASIC5.19□□□□□ -1.58
Ift88Q61371 Olfr992-202ENSMUST00000213749 2150 ntAPPRIS P1 TSL 5 BASIC5.19□□□□□ -1.58
Ift88Q61371 Tfec-201ENSMUST00000031533 1787 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
Ift88Q61371 1700017N19Rik-207ENSMUST00000190708 1945 ntAPPRIS P1 TSL 5 BASIC5.19□□□□□ -1.58
Ift88Q61371 Clvs1-201ENSMUST00000038841 3604 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
Ift88Q61371 Pign-205ENSMUST00000186485 6759 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
Ift88Q61371 Gm22273-201ENSMUST00000104040 132 ntBASIC5.19□□□□□ -1.58
Ift88Q61371 Gm13733-201ENSMUST00000117290 535 ntBASIC5.19□□□□□ -1.58
Ift88Q61371 Gm11971-201ENSMUST00000117715 288 ntBASIC5.19□□□□□ -1.58
Ift88Q61371 Gm15382-201ENSMUST00000118011 537 ntBASIC5.19□□□□□ -1.58
Ift88Q61371 Gm12162-201ENSMUST00000123422 154 ntTSL 5 BASIC5.19□□□□□ -1.58
Ift88Q61371 2210408F21Rik-203ENSMUST00000133510 429 ntTSL 3 BASIC5.19□□□□□ -1.58
Ift88Q61371 Xaf1-202ENSMUST00000140842 651 ntTSL 3 BASIC5.19□□□□□ -1.58
Ift88Q61371 Gm10717-206ENSMUST00000177875 675 ntTSL 5 BASIC5.19□□□□□ -1.58
Ift88Q61371 Gm25944-201ENSMUST00000178758 94 ntBASIC5.19□□□□□ -1.58
Ift88Q61371 Gm27039-201ENSMUST00000182438 962 ntBASIC5.19□□□□□ -1.58
Ift88Q61371 Rian-214ENSMUST00000183026 596 ntTSL 5 BASIC5.19□□□□□ -1.58
Ift88Q61371 Mir6411-201ENSMUST00000183556 108 ntBASIC5.19□□□□□ -1.58
Ift88Q61371 Mir7222-201ENSMUST00000183740 75 ntBASIC5.19□□□□□ -1.58
Ift88Q61371 Mir6973b-201ENSMUST00000184185 80 ntBASIC5.19□□□□□ -1.58
Ift88Q61371 Gm28097-201ENSMUST00000187333 366 ntBASIC5.19□□□□□ -1.58
Ift88Q61371 Gm20822-202ENSMUST00000188422 1229 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
Retrieved 100 of 76,532 protein–RNA pairs in 70.6 ms