Protein–RNA interactions for Protein: Q5NCC9

Trim58, E3 ubiquitin-protein ligase TRIM58, mousemouse

Predictions only

Length 485 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim58Q5NCC9 Gprc6a-203ENSMUST00000219286 2574 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
Trim58Q5NCC9 Olfr998-202ENSMUST00000215083 1399 ntAPPRIS P1 TSL 5 BASIC5.11□□□□□ -1.59
Trim58Q5NCC9 4930544M13Rik-202ENSMUST00000181553 1403 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
Trim58Q5NCC9 Cdc27-203ENSMUST00000106962 3160 ntTSL 5 BASIC5.11□□□□□ -1.59
Trim58Q5NCC9 Vmn1r22-202ENSMUST00000227650 3674 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
Trim58Q5NCC9 Slco6d1-201ENSMUST00000027575 2328 ntAPPRIS P4 TSL 1 (best) BASIC5.11□□□□□ -1.59
Trim58Q5NCC9 Btla-201ENSMUST00000063654 3235 ntAPPRIS P4 TSL 1 (best) BASIC5.1□□□□□ -1.59
Trim58Q5NCC9 Ktn1-201ENSMUST00000022391 4484 ntAPPRIS P3 TSL 1 (best) BASIC5.1□□□□□ -1.59
Trim58Q5NCC9 Gm25177-201ENSMUST00000122634 117 ntBASIC5.1□□□□□ -1.59
Trim58Q5NCC9 Gm15350-201ENSMUST00000135138 569 ntTSL 2 BASIC5.1□□□□□ -1.59
Trim58Q5NCC9 Gm24441-201ENSMUST00000157235 281 ntBASIC5.1□□□□□ -1.59
Trim58Q5NCC9 Gm16571-201ENSMUST00000159112 291 ntBASIC5.1□□□□□ -1.59
Trim58Q5NCC9 Vmn2r-ps66-201ENSMUST00000173203 1256 ntBASIC5.1□□□□□ -1.59
Trim58Q5NCC9 Gm20515-201ENSMUST00000174440 4824 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
Trim58Q5NCC9 Vmn2r-ps149-201ENSMUST00000188423 590 ntBASIC5.1□□□□□ -1.59
Trim58Q5NCC9 Gm28997-201ENSMUST00000188759 429 ntBASIC5.1□□□□□ -1.59
Trim58Q5NCC9 Gm8480-201ENSMUST00000190350 698 ntBASIC5.1□□□□□ -1.59
Trim58Q5NCC9 Gm29479-201ENSMUST00000190352 455 ntBASIC5.1□□□□□ -1.59
Trim58Q5NCC9 Gm18547-201ENSMUST00000192439 811 ntBASIC5.1□□□□□ -1.59
Trim58Q5NCC9 Gm36994-201ENSMUST00000192941 492 ntBASIC5.1□□□□□ -1.59
Trim58Q5NCC9 Gm9238-201ENSMUST00000196181 329 ntBASIC5.1□□□□□ -1.59
Trim58Q5NCC9 Gm43044-201ENSMUST00000198091 379 ntBASIC5.1□□□□□ -1.59
Trim58Q5NCC9 Gm42983-201ENSMUST00000199879 815 ntBASIC5.1□□□□□ -1.59
Trim58Q5NCC9 Olfr897-ps1-201ENSMUST00000213589 935 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
Trim58Q5NCC9 AC163354.1-207ENSMUST00000221270 1243 ntTSL 5 BASIC5.1□□□□□ -1.59
Trim58Q5NCC9 AC124524.2-201ENSMUST00000223940 588 ntBASIC5.1□□□□□ -1.59
Trim58Q5NCC9 AC117202.1-201ENSMUST00000227007 445 ntBASIC5.1□□□□□ -1.59
Trim58Q5NCC9 4921515E04Rik-203ENSMUST00000227364 2309 ntBASIC5.1□□□□□ -1.59
Trim58Q5NCC9 Olfr1507-201ENSMUST00000073571 1112 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
Trim58Q5NCC9 Ddx60-202ENSMUST00000093485 5989 ntAPPRIS ALT2 TSL 5 BASIC5.1□□□□□ -1.59
Trim58Q5NCC9 Olfr1166-201ENSMUST00000099833 1628 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
Trim58Q5NCC9 Tom1l1-201ENSMUST00000020849 4308 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
Trim58Q5NCC9 Ccr2-201ENSMUST00000055918 2999 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
Trim58Q5NCC9 Pkhd1l1-203ENSMUST00000209244 12949 ntAPPRIS P1 TSL 5 BASIC5.09□□□□□ -1.59
Trim58Q5NCC9 AC153522.2-201ENSMUST00000218389 3853 ntBASIC5.09□□□□□ -1.59
Trim58Q5NCC9 Gm3696-201ENSMUST00000167923 1814 ntAPPRIS P1 TSL 5 BASIC5.09□□□□□ -1.59
Trim58Q5NCC9 Olfr1058-202ENSMUST00000213998 1710 ntAPPRIS P1 TSL 5 BASIC5.09□□□□□ -1.59
Trim58Q5NCC9 Cd53-201ENSMUST00000038845 1742 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
Trim58Q5NCC9 Igkv5-45-201ENSMUST00000103366 385 ntAPPRIS P1 BASIC5.09□□□□□ -1.59
Trim58Q5NCC9 Gm23319-201ENSMUST00000104467 131 ntBASIC5.09□□□□□ -1.59
Trim58Q5NCC9 Gm24469-201ENSMUST00000104487 131 ntBASIC5.09□□□□□ -1.59
Trim58Q5NCC9 Olfr1196-201ENSMUST00000104892 945 ntAPPRIS P1 BASIC5.09□□□□□ -1.59
Trim58Q5NCC9 Gm13268-201ENSMUST00000117485 433 ntBASIC5.09□□□□□ -1.59
Trim58Q5NCC9 Gm15994-201ENSMUST00000118029 402 ntBASIC5.09□□□□□ -1.59
Trim58Q5NCC9 Gm13852-201ENSMUST00000122350 242 ntBASIC5.09□□□□□ -1.59
Trim58Q5NCC9 Gm16222-201ENSMUST00000124320 1298 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
Trim58Q5NCC9 Gm14161-201ENSMUST00000137020 339 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
Trim58Q5NCC9 Gm22361-201ENSMUST00000158435 176 ntBASIC5.09□□□□□ -1.59
Trim58Q5NCC9 Gm26683-201ENSMUST00000181737 470 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
Trim58Q5NCC9 Gm27875-201ENSMUST00000184425 123 ntBASIC5.09□□□□□ -1.59
Trim58Q5NCC9 Gm29196-201ENSMUST00000189239 618 ntBASIC5.09□□□□□ -1.59
Trim58Q5NCC9 Gm17790-201ENSMUST00000191545 1228 ntBASIC5.09□□□□□ -1.59
Trim58Q5NCC9 Gm37629-201ENSMUST00000193635 1050 ntBASIC5.09□□□□□ -1.59
Trim58Q5NCC9 Gm42451-201ENSMUST00000197410 244 ntBASIC5.09□□□□□ -1.59
Trim58Q5NCC9 Calml4-203ENSMUST00000213643 710 ntTSL 2 BASIC5.09□□□□□ -1.59
Trim58Q5NCC9 Olfr606-201ENSMUST00000098200 960 ntAPPRIS P1 BASIC5.09□□□□□ -1.59
Trim58Q5NCC9 Olfr1197-201ENSMUST00000099815 945 ntAPPRIS P1 BASIC5.09□□□□□ -1.59
Trim58Q5NCC9 9430025C20Rik-201ENSMUST00000068663 2115 ntBASIC5.09□□□□□ -1.59
Trim58Q5NCC9 Hdx-201ENSMUST00000038472 9385 ntTSL 1 (best) BASIC5.09□□□□□ -1.6
Trim58Q5NCC9 Spag17-204ENSMUST00000164539 7862 ntAPPRIS P1 TSL 5 BASIC5.09□□□□□ -1.6
Trim58Q5NCC9 Vwc2l-203ENSMUST00000161937 4323 ntTSL 1 (best) BASIC5.09□□□□□ -1.6
Trim58Q5NCC9 Cyp2j12-201ENSMUST00000097972 1675 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
Trim58Q5NCC9 Vmn1r172-201ENSMUST00000038694 9009 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
Trim58Q5NCC9 Olfr843-202ENSMUST00000214019 7499 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
Trim58Q5NCC9 Gm37625-201ENSMUST00000194969 4872 ntBASIC5.08□□□□□ -1.6
Trim58Q5NCC9 Cdh7-201ENSMUST00000027542 3390 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
Trim58Q5NCC9 AC159188.2-201ENSMUST00000224103 1301 ntBASIC5.08□□□□□ -1.6
Trim58Q5NCC9 Nat1-201ENSMUST00000026677 1347 ntAPPRIS P2 BASIC5.08□□□□□ -1.6
Trim58Q5NCC9 Mir761-201ENSMUST00000103245 76 ntBASIC5.08□□□□□ -1.6
Trim58Q5NCC9 Clec4a3-202ENSMUST00000117173 1165 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
Trim58Q5NCC9 Gm15421-202ENSMUST00000118224 399 ntBASIC5.08□□□□□ -1.6
Trim58Q5NCC9 Gm13690-201ENSMUST00000118989 285 ntBASIC5.08□□□□□ -1.6
Trim58Q5NCC9 Gm15480-201ENSMUST00000120442 519 ntBASIC5.08□□□□□ -1.6
Trim58Q5NCC9 Vmn2r-ps2-201ENSMUST00000121053 765 ntBASIC5.08□□□□□ -1.6
Trim58Q5NCC9 Gm15949-201ENSMUST00000129485 126 ntTSL 3 BASIC5.08□□□□□ -1.6
Trim58Q5NCC9 Mir1947-201ENSMUST00000158235 85 ntBASIC5.08□□□□□ -1.6
Trim58Q5NCC9 Gm25713-201ENSMUST00000158625 109 ntBASIC5.08□□□□□ -1.6
Trim58Q5NCC9 Gm23198-201ENSMUST00000158811 91 ntBASIC5.08□□□□□ -1.6
Trim58Q5NCC9 Lsm5-203ENSMUST00000176595 274 ntTSL 5 BASIC5.08□□□□□ -1.6
Trim58Q5NCC9 Esd-208ENSMUST00000177137 853 ntTSL 5 BASIC5.08□□□□□ -1.6
Trim58Q5NCC9 Gm27286-201ENSMUST00000184934 179 ntBASIC5.08□□□□□ -1.6
Trim58Q5NCC9 2310030A07Rik-201ENSMUST00000186460 610 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
Trim58Q5NCC9 Gm29610-201ENSMUST00000187749 453 ntBASIC5.08□□□□□ -1.6
Trim58Q5NCC9 Gm20561-201ENSMUST00000188131 292 ntBASIC5.08□□□□□ -1.6
Trim58Q5NCC9 Gm18303-201ENSMUST00000190055 1176 ntBASIC5.08□□□□□ -1.6
Trim58Q5NCC9 Gm31942-201ENSMUST00000192534 827 ntTSL 5 BASIC5.08□□□□□ -1.6
Trim58Q5NCC9 Gm38270-201ENSMUST00000192721 407 ntBASIC5.08□□□□□ -1.6
Trim58Q5NCC9 Gm43370-201ENSMUST00000196437 284 ntBASIC5.08□□□□□ -1.6
Trim58Q5NCC9 AC122464.1-201ENSMUST00000202789 770 ntBASIC5.08□□□□□ -1.6
Trim58Q5NCC9 Gm44234-201ENSMUST00000204246 900 ntBASIC5.08□□□□□ -1.6
Trim58Q5NCC9 Gm45032-201ENSMUST00000205375 520 ntBASIC5.08□□□□□ -1.6
Trim58Q5NCC9 Gm17780-201ENSMUST00000207142 612 ntBASIC5.08□□□□□ -1.6
Trim58Q5NCC9 Gm31698-202ENSMUST00000214385 527 ntTSL 5 BASIC5.08□□□□□ -1.6
Trim58Q5NCC9 CR974592.1-201ENSMUST00000220422 574 ntBASIC5.08□□□□□ -1.6
Trim58Q5NCC9 Gm34215-202ENSMUST00000223024 492 ntTSL 5 BASIC5.08□□□□□ -1.6
Trim58Q5NCC9 AC158525.1-201ENSMUST00000223806 576 ntBASIC5.08□□□□□ -1.6
Trim58Q5NCC9 AC133517.1-202ENSMUST00000224409 233 ntBASIC5.08□□□□□ -1.6
Trim58Q5NCC9 AC166095.1-203ENSMUST00000224591 233 ntBASIC5.08□□□□□ -1.6
Trim58Q5NCC9 CT025536.1-201ENSMUST00000226744 844 ntBASIC5.08□□□□□ -1.6
Trim58Q5NCC9 Prss37-201ENSMUST00000031967 1049 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
Retrieved 100 of 76,532 protein–RNA pairs in 86.8 ms