Protein–RNA interactions for Protein: Q3UWA4

Trim40, Tripartite motif-containing protein 40, mousemouse

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim40Q3UWA4 Gm16026-202ENSMUST00000159695 772 ntBASIC4.14□□□□□ -1.75
Trim40Q3UWA4 Gm5263-201ENSMUST00000163646 601 ntBASIC4.14□□□□□ -1.75
Trim40Q3UWA4 Gm6650-201ENSMUST00000166710 614 ntBASIC4.14□□□□□ -1.75
Trim40Q3UWA4 Vmn1r-ps29-201ENSMUST00000174862 785 ntBASIC4.14□□□□□ -1.75
Trim40Q3UWA4 Gm26828-201ENSMUST00000180640 172 ntBASIC4.14□□□□□ -1.75
Trim40Q3UWA4 Gm27155-201ENSMUST00000183716 898 ntBASIC4.14□□□□□ -1.75
Trim40Q3UWA4 Gm28396-201ENSMUST00000190309 379 ntBASIC4.14□□□□□ -1.75
Trim40Q3UWA4 Gm44006-201ENSMUST00000204273 396 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
Trim40Q3UWA4 1700011C11Rik-201ENSMUST00000205268 365 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
Trim40Q3UWA4 Gm45006-201ENSMUST00000206078 690 ntBASIC4.14□□□□□ -1.75
Trim40Q3UWA4 Gm45367-201ENSMUST00000210171 347 ntBASIC4.14□□□□□ -1.75
Trim40Q3UWA4 Gm39302-201ENSMUST00000215184 636 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
Trim40Q3UWA4 AC158686.2-201ENSMUST00000218599 976 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
Trim40Q3UWA4 Gm20368-201ENSMUST00000220716 301 ntBASIC4.14□□□□□ -1.75
Trim40Q3UWA4 AC159622.3-201ENSMUST00000221010 361 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
Trim40Q3UWA4 AC134864.1-201ENSMUST00000226326 511 ntBASIC4.14□□□□□ -1.75
Trim40Q3UWA4 E330017A01Rik-201ENSMUST00000053249 1108 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
Trim40Q3UWA4 Olfr1484-201ENSMUST00000074180 948 ntAPPRIS P1 BASIC4.14□□□□□ -1.75
Trim40Q3UWA4 Olfr792-201ENSMUST00000076575 936 ntAPPRIS P1 BASIC4.14□□□□□ -1.75
Trim40Q3UWA4 Gm23875-201ENSMUST00000083711 318 ntBASIC4.14□□□□□ -1.75
Trim40Q3UWA4 Obp1b-201ENSMUST00000088198 797 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
Trim40Q3UWA4 Gm6361-201ENSMUST00000091031 435 ntBASIC4.14□□□□□ -1.75
Trim40Q3UWA4 Ube2v2-201ENSMUST00000096234 609 ntTSL 3 BASIC4.14□□□□□ -1.75
Trim40Q3UWA4 Olfr1109-201ENSMUST00000099863 939 ntAPPRIS P1 BASIC4.14□□□□□ -1.75
Trim40Q3UWA4 Olfr1066-201ENSMUST00000099885 942 ntAPPRIS P1 BASIC4.14□□□□□ -1.75
Trim40Q3UWA4 Ktn1-201ENSMUST00000022391 4484 ntAPPRIS P3 TSL 1 (best) BASIC4.14□□□□□ -1.75
Trim40Q3UWA4 Nlrp2-201ENSMUST00000045022 3404 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
Trim40Q3UWA4 Olfr726-203ENSMUST00000213345 1728 ntAPPRIS P1 TSL 2 BASIC4.14□□□□□ -1.75
Trim40Q3UWA4 Olfr646-202ENSMUST00000214099 3778 ntAPPRIS P1 TSL 5 BASIC4.14□□□□□ -1.75
Trim40Q3UWA4 Gm43369-201ENSMUST00000196373 1552 ntBASIC4.14□□□□□ -1.75
Trim40Q3UWA4 Gm38106-201ENSMUST00000194107 2534 ntBASIC4.14□□□□□ -1.75
Trim40Q3UWA4 Aspn-202ENSMUST00000177948 2329 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
Trim40Q3UWA4 Cpa3-201ENSMUST00000001921 1449 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
Trim40Q3UWA4 Gm18300-201ENSMUST00000192792 1406 ntBASIC4.13□□□□□ -1.75
Trim40Q3UWA4 Casp12-201ENSMUST00000027009 2649 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
Trim40Q3UWA4 Olfr128-202ENSMUST00000216440 3644 ntAPPRIS P1 TSL 5 BASIC4.13□□□□□ -1.75
Trim40Q3UWA4 5830444F18Rik-201ENSMUST00000194009 1992 ntBASIC4.13□□□□□ -1.75
Trim40Q3UWA4 Gm8297-202ENSMUST00000171964 1759 ntAPPRIS P5 TSL 5 BASIC4.13□□□□□ -1.75
Trim40Q3UWA4 Gm43327-201ENSMUST00000199285 4055 ntBASIC4.13□□□□□ -1.75
Trim40Q3UWA4 Vmn1r-ps108-201ENSMUST00000117059 365 ntBASIC4.13□□□□□ -1.75
Trim40Q3UWA4 Gm12448-201ENSMUST00000118852 655 ntBASIC4.13□□□□□ -1.75
Trim40Q3UWA4 Gm11262-201ENSMUST00000119326 833 ntBASIC4.13□□□□□ -1.75
Trim40Q3UWA4 Gm14067-201ENSMUST00000119340 314 ntBASIC4.13□□□□□ -1.75
Trim40Q3UWA4 Gm13557-201ENSMUST00000120771 382 ntBASIC4.13□□□□□ -1.75
Trim40Q3UWA4 Junos-205ENSMUST00000130684 614 ntTSL 3 BASIC4.13□□□□□ -1.75
Trim40Q3UWA4 Gm17025-201ENSMUST00000133273 580 ntTSL 2 BASIC4.13□□□□□ -1.75
Trim40Q3UWA4 Gm23385-201ENSMUST00000158592 295 ntBASIC4.13□□□□□ -1.75
Trim40Q3UWA4 Vmn1r-ps62-201ENSMUST00000173275 910 ntBASIC4.13□□□□□ -1.75
Trim40Q3UWA4 Vmn1r10-201ENSMUST00000176073 936 ntAPPRIS P1 BASIC4.13□□□□□ -1.75
Trim40Q3UWA4 Gm26318-201ENSMUST00000176507 96 ntBASIC4.13□□□□□ -1.75
Trim40Q3UWA4 Gm28703-201ENSMUST00000185312 1159 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
Trim40Q3UWA4 Gm29053-201ENSMUST00000187484 370 ntTSL 5 BASIC4.13□□□□□ -1.75
Trim40Q3UWA4 Gm21856-201ENSMUST00000187547 696 ntBASIC4.13□□□□□ -1.75
Trim40Q3UWA4 1700010H22Rik-202ENSMUST00000187592 1003 ntTSL 5 BASIC4.13□□□□□ -1.75
Trim40Q3UWA4 Gm20954-201ENSMUST00000189078 644 ntBASIC4.13□□□□□ -1.75
Trim40Q3UWA4 Mug-ps1-203ENSMUST00000190643 655 ntTSL 3 BASIC4.13□□□□□ -1.75
Trim40Q3UWA4 Gm37193-201ENSMUST00000193087 513 ntBASIC4.13□□□□□ -1.75
Trim40Q3UWA4 Gm44456-201ENSMUST00000196554 89 ntBASIC4.13□□□□□ -1.75
Trim40Q3UWA4 Igkv4-56-201ENSMUST00000198436 349 ntBASIC4.13□□□□□ -1.75
Trim40Q3UWA4 Tgif1-ps-201ENSMUST00000201864 736 ntBASIC4.13□□□□□ -1.75
Trim40Q3UWA4 AC069561.4-201ENSMUST00000215291 572 ntAPPRIS P1 TSL 3 BASIC4.13□□□□□ -1.75
Trim40Q3UWA4 AC166902.1-201ENSMUST00000216653 517 ntBASIC4.13□□□□□ -1.75
Trim40Q3UWA4 AC161114.1-201ENSMUST00000218223 474 ntBASIC4.13□□□□□ -1.75
Trim40Q3UWA4 Reg3g-201ENSMUST00000032089 771 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
Trim40Q3UWA4 Olfr211-201ENSMUST00000065786 930 ntAPPRIS P1 BASIC4.13□□□□□ -1.75
Trim40Q3UWA4 Olfr749-201ENSMUST00000074674 1016 ntAPPRIS P1 TSL 3 BASIC4.13□□□□□ -1.75
Trim40Q3UWA4 Olfr248-201ENSMUST00000075329 1010 ntAPPRIS P1 BASIC4.13□□□□□ -1.75
Trim40Q3UWA4 Gm24319-201ENSMUST00000083389 107 ntBASIC4.13□□□□□ -1.75
Trim40Q3UWA4 Mir31-201ENSMUST00000083474 106 ntBASIC4.13□□□□□ -1.75
Trim40Q3UWA4 Olfr593-201ENSMUST00000098206 984 ntAPPRIS P2 BASIC4.13□□□□□ -1.75
Trim40Q3UWA4 Gm45235-201ENSMUST00000208016 4465 ntBASIC4.13□□□□□ -1.75
Trim40Q3UWA4 Cntn6-205ENSMUST00000162872 3467 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
Trim40Q3UWA4 Gm42876-201ENSMUST00000196989 3215 ntBASIC4.13□□□□□ -1.75
Trim40Q3UWA4 Olfr1082-201ENSMUST00000215600 1620 ntAPPRIS P1 TSL 3 BASIC4.13□□□□□ -1.75
Trim40Q3UWA4 Gm46430-206ENSMUST00000222064 1647 ntTSL 3 BASIC4.13□□□□□ -1.75
Trim40Q3UWA4 Gm38152-201ENSMUST00000195389 3566 ntBASIC4.13□□□□□ -1.75
Trim40Q3UWA4 Gm42736-201ENSMUST00000200723 1353 ntBASIC4.13□□□□□ -1.75
Trim40Q3UWA4 Olfr270-204ENSMUST00000215127 3145 ntAPPRIS ALT1 TSL 5 BASIC4.12□□□□□ -1.75
Trim40Q3UWA4 Vmn1r77-203ENSMUST00000227320 8308 ntAPPRIS P2 BASIC4.12□□□□□ -1.75
Trim40Q3UWA4 Gm38065-201ENSMUST00000193147 3492 ntBASIC4.12□□□□□ -1.75
Trim40Q3UWA4 Gm28488-203ENSMUST00000188792 1498 ntTSL 5 BASIC4.12□□□□□ -1.75
Trim40Q3UWA4 Gm16294-201ENSMUST00000070382 1459 ntTSL 2 BASIC4.12□□□□□ -1.75
Trim40Q3UWA4 Olfr1355-201ENSMUST00000078414 3317 ntAPPRIS P1 TSL 2 BASIC4.12□□□□□ -1.75
Trim40Q3UWA4 Zfp426-201ENSMUST00000080386 2417 ntAPPRIS P3 TSL 1 (best) BASIC4.12□□□□□ -1.75
Trim40Q3UWA4 Gm45033-201ENSMUST00000206710 3167 ntBASIC4.12□□□□□ -1.75
Trim40Q3UWA4 Samt2-201ENSMUST00000101137 923 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
Trim40Q3UWA4 Trbv13-3-201ENSMUST00000103271 340 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
Trim40Q3UWA4 Gm13785-201ENSMUST00000119099 690 ntBASIC4.12□□□□□ -1.75
Trim40Q3UWA4 Gm13815-201ENSMUST00000119963 412 ntBASIC4.12□□□□□ -1.75
Trim40Q3UWA4 Gm14500-201ENSMUST00000121647 113 ntBASIC4.12□□□□□ -1.75
Trim40Q3UWA4 Gm25103-201ENSMUST00000122671 318 ntBASIC4.12□□□□□ -1.75
Trim40Q3UWA4 Gm15767-202ENSMUST00000153786 544 ntTSL 3 BASIC4.12□□□□□ -1.75
Trim40Q3UWA4 Gm26153-201ENSMUST00000157433 127 ntBASIC4.12□□□□□ -1.75
Trim40Q3UWA4 Gm25606-201ENSMUST00000158363 95 ntBASIC4.12□□□□□ -1.75
Trim40Q3UWA4 Gm4207-201ENSMUST00000173144 960 ntBASIC4.12□□□□□ -1.75
Trim40Q3UWA4 Gm20428-201ENSMUST00000174365 283 ntBASIC4.12□□□□□ -1.75
Trim40Q3UWA4 Gm20647-201ENSMUST00000176396 857 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
Trim40Q3UWA4 Gm25525-201ENSMUST00000177701 107 ntBASIC4.12□□□□□ -1.75
Trim40Q3UWA4 Gm26178-201ENSMUST00000177706 107 ntBASIC4.12□□□□□ -1.75
Trim40Q3UWA4 Gm26465-201ENSMUST00000178517 107 ntBASIC4.12□□□□□ -1.75
Retrieved 100 of 76,532 protein–RNA pairs in 85.7 ms