Protein–RNA interactions for Protein: Q0EEE2

Ptchd3, Patched domain-containing protein 3, mousemouse

Predictions only

Length 906 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ptchd3Q0EEE2 Spink7-201ENSMUST00000076194 258 ntAPPRIS P1 TSL 5 BASIC4.28□□□□□ -1.72
Ptchd3Q0EEE2 Snord21-201ENSMUST00000082519 94 ntBASIC4.28□□□□□ -1.72
Ptchd3Q0EEE2 Defa5-201ENSMUST00000098892 376 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
Ptchd3Q0EEE2 AC124446.1-201ENSMUST00000221027 2644 ntBASIC4.28□□□□□ -1.72
Ptchd3Q0EEE2 Cysltr1-202ENSMUST00000113480 5142 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
Ptchd3Q0EEE2 Olfr694-204ENSMUST00000216895 4853 ntAPPRIS P1 TSL 5 BASIC4.28□□□□□ -1.72
Ptchd3Q0EEE2 Sorbs2-203ENSMUST00000124544 3798 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
Ptchd3Q0EEE2 Gm35191-201ENSMUST00000200925 2475 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
Ptchd3Q0EEE2 Abca5-201ENSMUST00000043961 8231 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.73
Ptchd3Q0EEE2 4932429P05Rik-201ENSMUST00000113958 3093 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
Ptchd3Q0EEE2 B830012L14Rik-201ENSMUST00000182785 4505 ntTSL 5 BASIC4.27□□□□□ -1.73
Ptchd3Q0EEE2 5830444F18Rik-201ENSMUST00000194009 1992 ntBASIC4.27□□□□□ -1.73
Ptchd3Q0EEE2 CAAA01194877.1-201ENSMUST00000213137 4233 ntBASIC4.27□□□□□ -1.73
Ptchd3Q0EEE2 Vmn2r7-202ENSMUST00000161972 3583 ntAPPRIS ALT2 TSL 5 BASIC4.27□□□□□ -1.73
Ptchd3Q0EEE2 4921515E04Rik-202ENSMUST00000226383 1738 ntBASIC4.27□□□□□ -1.73
Ptchd3Q0EEE2 Gm44860-201ENSMUST00000208473 2346 ntBASIC4.27□□□□□ -1.73
Ptchd3Q0EEE2 Fgf7-202ENSMUST00000110442 2287 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
Ptchd3Q0EEE2 Gm23709-201ENSMUST00000104364 130 ntBASIC4.27□□□□□ -1.73
Ptchd3Q0EEE2 Mir105-201ENSMUST00000104655 80 ntBASIC4.27□□□□□ -1.73
Ptchd3Q0EEE2 Smim8-203ENSMUST00000108132 864 ntAPPRIS P1 TSL 3 BASIC4.27□□□□□ -1.73
Ptchd3Q0EEE2 Gm14393-202ENSMUST00000109066 564 ntTSL 2 BASIC4.27□□□□□ -1.73
Ptchd3Q0EEE2 Cask-202ENSMUST00000115435 726 ntTSL 3 BASIC4.27□□□□□ -1.73
Ptchd3Q0EEE2 Gm15361-201ENSMUST00000119320 444 ntBASIC4.27□□□□□ -1.73
Ptchd3Q0EEE2 Gm13788-201ENSMUST00000120767 601 ntBASIC4.27□□□□□ -1.73
Ptchd3Q0EEE2 Gm13459-201ENSMUST00000121558 646 ntBASIC4.27□□□□□ -1.73
Ptchd3Q0EEE2 Gm14500-201ENSMUST00000121647 113 ntBASIC4.27□□□□□ -1.73
Ptchd3Q0EEE2 Gm7840-201ENSMUST00000122086 533 ntBASIC4.27□□□□□ -1.73
Ptchd3Q0EEE2 Gm10059-201ENSMUST00000131139 171 ntBASIC4.27□□□□□ -1.73
Ptchd3Q0EEE2 Gm17025-201ENSMUST00000133273 580 ntTSL 2 BASIC4.27□□□□□ -1.73
Ptchd3Q0EEE2 9030204H09Rik-201ENSMUST00000139455 653 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
Ptchd3Q0EEE2 Spink10-206ENSMUST00000162511 684 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
Ptchd3Q0EEE2 Gm5263-201ENSMUST00000163646 601 ntBASIC4.27□□□□□ -1.73
Ptchd3Q0EEE2 Cldn34c1-206ENSMUST00000169445 705 ntAPPRIS P3 TSL 5 BASIC4.27□□□□□ -1.73
Ptchd3Q0EEE2 Gm20397-201ENSMUST00000174520 362 ntBASIC4.27□□□□□ -1.73
Ptchd3Q0EEE2 Gm8890-202ENSMUST00000177727 465 ntAPPRIS ALT2 TSL 5 BASIC4.27□□□□□ -1.73
Ptchd3Q0EEE2 Gm2056-201ENSMUST00000178852 435 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
Ptchd3Q0EEE2 1700057G04Rik-206ENSMUST00000185580 842 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
Ptchd3Q0EEE2 Gm28263-201ENSMUST00000185884 400 ntBASIC4.27□□□□□ -1.73
Ptchd3Q0EEE2 1700010H22Rik-202ENSMUST00000187592 1003 ntTSL 5 BASIC4.27□□□□□ -1.73
Ptchd3Q0EEE2 1700063I16Rik-201ENSMUST00000194611 611 ntBASIC4.27□□□□□ -1.73
Ptchd3Q0EEE2 A330074H02Rik-201ENSMUST00000194667 1039 ntBASIC4.27□□□□□ -1.73
Ptchd3Q0EEE2 Gm37095-201ENSMUST00000195421 205 ntBASIC4.27□□□□□ -1.73
Ptchd3Q0EEE2 Csn1s2a-202ENSMUST00000196585 762 ntAPPRIS ALT2 TSL 3 BASIC4.27□□□□□ -1.73
Ptchd3Q0EEE2 Gm31532-201ENSMUST00000203555 767 ntBASIC4.27□□□□□ -1.73
Ptchd3Q0EEE2 Gm44761-201ENSMUST00000209080 440 ntTSL 2 BASIC4.27□□□□□ -1.73
Ptchd3Q0EEE2 Gm18258-201ENSMUST00000210413 542 ntBASIC4.27□□□□□ -1.73
Ptchd3Q0EEE2 Gm32281-202ENSMUST00000217220 691 ntTSL 3 BASIC4.27□□□□□ -1.73
Ptchd3Q0EEE2 AC122905.1-201ENSMUST00000218181 456 ntTSL 5 BASIC4.27□□□□□ -1.73
Ptchd3Q0EEE2 Gm34609-201ENSMUST00000219284 789 ntTSL 5 BASIC4.27□□□□□ -1.73
Ptchd3Q0EEE2 AC154709.1-201ENSMUST00000222304 446 ntTSL 3 BASIC4.27□□□□□ -1.73
Ptchd3Q0EEE2 CT030194.1-201ENSMUST00000225507 532 ntBASIC4.27□□□□□ -1.73
Ptchd3Q0EEE2 Gm15421-201ENSMUST00000051985 443 ntTSL 3 BASIC4.27□□□□□ -1.73
Ptchd3Q0EEE2 Olfr1052-201ENSMUST00000054746 940 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
Ptchd3Q0EEE2 Olfr1026-201ENSMUST00000056718 965 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
Ptchd3Q0EEE2 Csn1s2a-201ENSMUST00000076379 920 ntAPPRIS P3 TSL 1 (best) BASIC4.27□□□□□ -1.73
Ptchd3Q0EEE2 Olfr948-201ENSMUST00000076516 966 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
Ptchd3Q0EEE2 Gm22220-201ENSMUST00000082671 149 ntBASIC4.27□□□□□ -1.73
Ptchd3Q0EEE2 Gm24031-201ENSMUST00000083930 131 ntBASIC4.27□□□□□ -1.73
Ptchd3Q0EEE2 Olfr1162-201ENSMUST00000099837 945 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
Ptchd3Q0EEE2 Cd28-201ENSMUST00000027165 4347 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
Ptchd3Q0EEE2 Pkhd1l1-203ENSMUST00000209244 12949 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
Ptchd3Q0EEE2 Gm44678-201ENSMUST00000207828 2775 ntBASIC4.27□□□□□ -1.73
Ptchd3Q0EEE2 AL589737.1-201ENSMUST00000221163 2763 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
Ptchd3Q0EEE2 Nxf2-203ENSMUST00000113189 2375 ntAPPRIS P3 TSL 1 (best) BASIC4.27□□□□□ -1.73
Ptchd3Q0EEE2 Olfr1188-202ENSMUST00000217131 1406 ntAPPRIS ALT2 TSL 3 BASIC4.27□□□□□ -1.73
Ptchd3Q0EEE2 Gm36931-201ENSMUST00000192997 4801 ntBASIC4.27□□□□□ -1.73
Ptchd3Q0EEE2 Gm36962-201ENSMUST00000192114 1761 ntBASIC4.27□□□□□ -1.73
Ptchd3Q0EEE2 Olfr1493-ps1-201ENSMUST00000207208 1777 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
Ptchd3Q0EEE2 Gm5615-201ENSMUST00000098900 2348 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
Ptchd3Q0EEE2 Olfr726-206ENSMUST00000217025 1363 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
Ptchd3Q0EEE2 Gm45093-201ENSMUST00000206859 2463 ntBASIC4.27□□□□□ -1.73
Ptchd3Q0EEE2 Rnf128-202ENSMUST00000113027 2641 ntTSL 5 BASIC4.26□□□□□ -1.73
Ptchd3Q0EEE2 Pign-201ENSMUST00000070699 6528 ntAPPRIS P1 TSL 5 BASIC4.26□□□□□ -1.73
Ptchd3Q0EEE2 Olfr1251-201ENSMUST00000214304 3133 ntAPPRIS P1 TSL 5 BASIC4.26□□□□□ -1.73
Ptchd3Q0EEE2 Dnah7a-201ENSMUST00000094964 12245 ntAPPRIS P1 TSL 5 BASIC4.26□□□□□ -1.73
Ptchd3Q0EEE2 Vmn2r76-201ENSMUST00000165771 2562 ntAPPRIS P1 TSL 5 BASIC4.26□□□□□ -1.73
Ptchd3Q0EEE2 Agtr2-201ENSMUST00000089188 3283 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
Ptchd3Q0EEE2 Gm37764-201ENSMUST00000194664 2150 ntBASIC4.26□□□□□ -1.73
Ptchd3Q0EEE2 Ddi1-201ENSMUST00000051706 7114 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
Ptchd3Q0EEE2 4930510E17Rik-201ENSMUST00000034550 1639 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
Ptchd3Q0EEE2 Gm24160-201ENSMUST00000104594 126 ntBASIC4.26□□□□□ -1.73
Ptchd3Q0EEE2 Gm17106-201ENSMUST00000105610 459 ntTSL 5 BASIC4.26□□□□□ -1.73
Ptchd3Q0EEE2 Gm14304-201ENSMUST00000117272 446 ntBASIC4.26□□□□□ -1.73
Ptchd3Q0EEE2 Gm8374-201ENSMUST00000163826 672 ntAPPRIS P1 TSL 5 BASIC4.26□□□□□ -1.73
Ptchd3Q0EEE2 Samd15-201ENSMUST00000169669 1194 ntBASIC4.26□□□□□ -1.73
Ptchd3Q0EEE2 Stx5a-215ENSMUST00000176570 563 ntTSL 2 BASIC4.26□□□□□ -1.73
Ptchd3Q0EEE2 Gm4707-202ENSMUST00000183937 276 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
Ptchd3Q0EEE2 Scgb2b28-ps-201ENSMUST00000188974 337 ntBASIC4.26□□□□□ -1.73
Ptchd3Q0EEE2 Gm37961-201ENSMUST00000192729 299 ntBASIC4.26□□□□□ -1.73
Ptchd3Q0EEE2 Gm42484-201ENSMUST00000196075 2104 ntBASIC4.26□□□□□ -1.73
Ptchd3Q0EEE2 Gm42593-201ENSMUST00000198469 377 ntBASIC4.26□□□□□ -1.73
Ptchd3Q0EEE2 Gm44773-201ENSMUST00000207374 557 ntBASIC4.26□□□□□ -1.73
Ptchd3Q0EEE2 Gm29785-201ENSMUST00000217033 383 ntBASIC4.26□□□□□ -1.73
Ptchd3Q0EEE2 AC158686.2-201ENSMUST00000218599 976 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
Ptchd3Q0EEE2 AC126439.1-201ENSMUST00000226772 2104 ntBASIC4.26□□□□□ -1.73
Ptchd3Q0EEE2 Enkur-201ENSMUST00000027992 1199 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
Ptchd3Q0EEE2 Defb7-201ENSMUST00000047851 306 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
Ptchd3Q0EEE2 Vmn1r211-201ENSMUST00000073728 985 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
Ptchd3Q0EEE2 Dynlrb2-201ENSMUST00000078170 515 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
Ptchd3Q0EEE2 Gm5458-201ENSMUST00000096121 997 ntAPPRIS P1 TSL 2 BASIC4.26□□□□□ -1.73
Retrieved 100 of 76,532 protein–RNA pairs in 83 ms