Protein–RNA interactions for Protein: Q05722

Col9a1, Collagen alpha-1(IX) chain, mousemouse

Predictions only

Length 921 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col9a1Q05722 Gm6075-201ENSMUST00000186816 486 ntBASIC6.6□□□□□ -1.35
Col9a1Q05722 Kif14-203ENSMUST00000189413 8943 ntAPPRIS P2 TSL 1 (best) BASIC6.6□□□□□ -1.35
Col9a1Q05722 Shisa5-207ENSMUST00000197483 534 ntTSL 3 BASIC6.6□□□□□ -1.35
Col9a1Q05722 Gm20144-201ENSMUST00000203031 165 ntBASIC6.6□□□□□ -1.35
Col9a1Q05722 Gm44922-201ENSMUST00000206690 90 ntBASIC6.6□□□□□ -1.35
Col9a1Q05722 Gm44825-201ENSMUST00000207557 150 ntBASIC6.6□□□□□ -1.35
Col9a1Q05722 Gm44598-201ENSMUST00000207566 150 ntBASIC6.6□□□□□ -1.35
Col9a1Q05722 Gm25812-201ENSMUST00000082751 103 ntBASIC6.6□□□□□ -1.35
Col9a1Q05722 Cd209b-201ENSMUST00000084086 2039 ntAPPRIS P4 TSL 1 (best) BASIC6.6□□□□□ -1.35
Col9a1Q05722 Gabra6-201ENSMUST00000020703 2436 ntAPPRIS P3 TSL 1 (best) BASIC6.6□□□□□ -1.35
Col9a1Q05722 Emsy-202ENSMUST00000205276 7693 ntAPPRIS P2 TSL 1 (best) BASIC6.6□□□□□ -1.35
Col9a1Q05722 Svil-210ENSMUST00000140448 7423 ntAPPRIS P3 TSL 5 BASIC6.6□□□□□ -1.35
Col9a1Q05722 Rnf144b-202ENSMUST00000110111 3144 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
Col9a1Q05722 9330158H04Rik-206ENSMUST00000161161 3103 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
Col9a1Q05722 Pcyt1a-203ENSMUST00000115137 4244 ntTSL 5 BASIC6.6□□□□□ -1.35
Col9a1Q05722 Vip-201ENSMUST00000019906 1530 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
Col9a1Q05722 Rnf219-201ENSMUST00000022716 3420 ntAPPRIS P2 TSL 3 BASIC6.6□□□□□ -1.35
Col9a1Q05722 Olfr107-204ENSMUST00000215974 2282 ntAPPRIS P1 TSL 5 BASIC6.6□□□□□ -1.35
Col9a1Q05722 Eaf2-202ENSMUST00000075946 1878 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
Col9a1Q05722 Gm43679-201ENSMUST00000197051 3677 ntBASIC6.6□□□□□ -1.35
Col9a1Q05722 AC144772.2-201ENSMUST00000228830 2859 ntBASIC6.59□□□□□ -1.35
Col9a1Q05722 Gm37897-201ENSMUST00000192613 3561 ntBASIC6.59□□□□□ -1.35
Col9a1Q05722 Ncoa2-203ENSMUST00000081713 8171 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
Col9a1Q05722 AF366264-201ENSMUST00000071308 3157 ntAPPRIS P1 BASIC6.59□□□□□ -1.35
Col9a1Q05722 Odf2-206ENSMUST00000113759 3807 ntAPPRIS ALT2 TSL 1 (best) BASIC6.59□□□□□ -1.35
Col9a1Q05722 Gm33378-201ENSMUST00000219831 2758 ntBASIC6.59□□□□□ -1.35
Col9a1Q05722 Cnga1-202ENSMUST00000126799 2061 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
Col9a1Q05722 Gabrb3-202ENSMUST00000085240 5712 ntTSL 5 BASIC6.59□□□□□ -1.35
Col9a1Q05722 Abi1-202ENSMUST00000091394 3023 ntAPPRIS ALT1 TSL 5 BASIC6.59□□□□□ -1.35
Col9a1Q05722 Cyp2j12-201ENSMUST00000097972 1675 ntAPPRIS P1 TSL 5 BASIC6.59□□□□□ -1.35
Col9a1Q05722 Sema6a-206ENSMUST00000135790 4339 ntTSL 5 BASIC6.59□□□□□ -1.35
Col9a1Q05722 Adgrl2-205ENSMUST00000196526 5615 ntTSL 5 BASIC6.59□□□□□ -1.35
Col9a1Q05722 C8a-202ENSMUST00000064873 3617 ntAPPRIS P3 TSL 1 (best) BASIC6.59□□□□□ -1.35
Col9a1Q05722 AC138221.1-201ENSMUST00000216180 4944 ntAPPRIS P1 TSL 5 BASIC6.59□□□□□ -1.35
Col9a1Q05722 Gm37268-201ENSMUST00000192254 2614 ntBASIC6.59□□□□□ -1.35
Col9a1Q05722 Olfr982-201ENSMUST00000054051 5576 ntAPPRIS P1 BASIC6.59□□□□□ -1.35
Col9a1Q05722 Trav15-1-dv6-1-201ENSMUST00000103653 349 ntAPPRIS ALT2 BASIC6.59□□□□□ -1.35
Col9a1Q05722 Gnrh1-201ENSMUST00000111095 486 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
Col9a1Q05722 Gm13239-201ENSMUST00000119920 637 ntBASIC6.59□□□□□ -1.35
Col9a1Q05722 Cdrt4os2-201ENSMUST00000128675 494 ntTSL 2 BASIC6.59□□□□□ -1.35
Col9a1Q05722 Gm13062-201ENSMUST00000151337 562 ntTSL 3 BASIC6.59□□□□□ -1.35
Col9a1Q05722 Gm22789-201ENSMUST00000157884 130 ntBASIC6.59□□□□□ -1.35
Col9a1Q05722 Gm7568-203ENSMUST00000161626 415 ntTSL 3 BASIC6.59□□□□□ -1.35
Col9a1Q05722 Ulbp1-201ENSMUST00000169796 1093 ntAPPRIS ALT2 TSL 1 (best) BASIC6.59□□□□□ -1.35
Col9a1Q05722 Gm2026-203ENSMUST00000174416 532 ntTSL 3 BASIC6.59□□□□□ -1.35
Col9a1Q05722 Rps12-ps21-201ENSMUST00000178172 402 ntBASIC6.59□□□□□ -1.35
Col9a1Q05722 Gm28377-201ENSMUST00000189695 720 ntBASIC6.59□□□□□ -1.35
Col9a1Q05722 2210017I01Rik-201ENSMUST00000195278 822 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
Col9a1Q05722 Gm36992-201ENSMUST00000195463 428 ntTSL 3 BASIC6.59□□□□□ -1.35
Col9a1Q05722 Gm43470-201ENSMUST00000196175 454 ntTSL 5 BASIC6.59□□□□□ -1.35
Col9a1Q05722 Gm36406-202ENSMUST00000203761 551 ntTSL 5 BASIC6.59□□□□□ -1.35
Col9a1Q05722 Rho-205ENSMUST00000203877 939 ntTSL 2 BASIC6.59□□□□□ -1.35
Col9a1Q05722 Gm45899-201ENSMUST00000212196 1276 ntBASIC6.59□□□□□ -1.35
Col9a1Q05722 Gm31698-202ENSMUST00000214385 527 ntTSL 5 BASIC6.59□□□□□ -1.35
Col9a1Q05722 AC151968.1-201ENSMUST00000214437 568 ntTSL 5 BASIC6.59□□□□□ -1.35
Col9a1Q05722 AC159203.2-201ENSMUST00000221326 193 ntBASIC6.59□□□□□ -1.35
Col9a1Q05722 CT954323.1-201ENSMUST00000222774 229 ntBASIC6.59□□□□□ -1.35
Col9a1Q05722 Gm7042-201ENSMUST00000223027 384 ntBASIC6.59□□□□□ -1.35
Col9a1Q05722 AC154846.2-201ENSMUST00000228805 424 ntBASIC6.59□□□□□ -1.35
Col9a1Q05722 Pip-201ENSMUST00000075351 588 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
Col9a1Q05722 Dmtf1-202ENSMUST00000095017 3498 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
Col9a1Q05722 Gm45464-201ENSMUST00000210728 2844 ntTSL 5 BASIC6.59□□□□□ -1.35
Col9a1Q05722 Mettl4-201ENSMUST00000171284 2150 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
Col9a1Q05722 AC122346.1-201ENSMUST00000225266 3732 ntBASIC6.59□□□□□ -1.35
Col9a1Q05722 Scn11a-201ENSMUST00000070617 5837 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
Col9a1Q05722 St6galnac3-204ENSMUST00000200397 8169 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
Col9a1Q05722 Errfi1-202ENSMUST00000073600 3036 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
Col9a1Q05722 Gm8798-202ENSMUST00000213048 2357 ntTSL 5 BASIC6.59□□□□□ -1.35
Col9a1Q05722 Tnik-205ENSMUST00000160307 4404 ntAPPRIS P4 TSL 1 (best) BASIC6.59□□□□□ -1.36
Col9a1Q05722 Bdnf-203ENSMUST00000111043 3839 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.36
Col9a1Q05722 Psmf1-201ENSMUST00000042452 3809 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.36
Col9a1Q05722 Gm44675-201ENSMUST00000208188 2927 ntBASIC6.59□□□□□ -1.36
Col9a1Q05722 Gm5600-202ENSMUST00000211589 2331 ntTSL 1 (best) BASIC6.59□□□□□ -1.36
Col9a1Q05722 Phc3-204ENSMUST00000108255 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC6.59□□□□□ -1.36
Col9a1Q05722 Cep295-203ENSMUST00000098979 7188 ntAPPRIS P2 TSL 5 BASIC6.59□□□□□ -1.36
Col9a1Q05722 Oxgr1-201ENSMUST00000058213 3732 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.36
Col9a1Q05722 Slc25a53-203ENSMUST00000113070 3140 ntTSL 5 BASIC6.59□□□□□ -1.36
Col9a1Q05722 Gm42727-201ENSMUST00000202446 2823 ntBASIC6.58□□□□□ -1.36
Col9a1Q05722 Pcbp2-202ENSMUST00000078404 2829 ntTSL 2 BASIC6.58□□□□□ -1.36
Col9a1Q05722 Glb1l3-203ENSMUST00000210274 2532 ntAPPRIS P2 TSL 1 (best) BASIC6.58□□□□□ -1.36
Col9a1Q05722 Vmn1r4-202ENSMUST00000176838 2235 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
Col9a1Q05722 Slc12a1-202ENSMUST00000110494 4740 ntAPPRIS ALT2 TSL 5 BASIC6.58□□□□□ -1.36
Col9a1Q05722 Mospd2-202ENSMUST00000112247 2479 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
Col9a1Q05722 Gm38067-201ENSMUST00000192346 1911 ntBASIC6.58□□□□□ -1.36
Col9a1Q05722 Olfr1388-202ENSMUST00000215226 3034 ntAPPRIS P1 TSL 5 BASIC6.58□□□□□ -1.36
Col9a1Q05722 Ints2-202ENSMUST00000108039 4369 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
Col9a1Q05722 Gm43335-201ENSMUST00000198299 3276 ntBASIC6.58□□□□□ -1.36
Col9a1Q05722 Calcr-205ENSMUST00000171613 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC6.58□□□□□ -1.36
Col9a1Q05722 1700029M20Rik-203ENSMUST00000153347 2963 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
Col9a1Q05722 Slc4a8-201ENSMUST00000023776 11790 ntAPPRIS P3 TSL 1 (best) BASIC6.58□□□□□ -1.36
Col9a1Q05722 Pde1c-207ENSMUST00000168944 2126 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
Col9a1Q05722 Ccdc141-202ENSMUST00000049544 8969 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
Col9a1Q05722 Gm43374-201ENSMUST00000202498 2391 ntBASIC6.58□□□□□ -1.36
Col9a1Q05722 Cd226-201ENSMUST00000037142 2357 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
Col9a1Q05722 Adgrl2-220ENSMUST00000200543 5509 ntAPPRIS ALT1 TSL 5 BASIC6.58□□□□□ -1.36
Col9a1Q05722 Adam28-203ENSMUST00000224039 2638 ntAPPRIS ALT2 BASIC6.58□□□□□ -1.36
Col9a1Q05722 Tor1aip2-203ENSMUST00000097526 2589 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
Col9a1Q05722 Tmcc3-203ENSMUST00000117929 3317 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
Col9a1Q05722 Gm23841-201ENSMUST00000116951 114 ntBASIC6.58□□□□□ -1.36
Col9a1Q05722 Gm14469-201ENSMUST00000118363 202 ntBASIC6.58□□□□□ -1.36
Retrieved 100 of 76,532 protein–RNA pairs in 128.1 ms