Protein–RNA interactions for Protein: Q00780

Col8a1, Collagen alpha-1(VIII) chain, mousemouse

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col8a1Q00780 Obox3-ps2-201ENSMUST00000177243 1004 ntBASIC4.89□□□□□ -1.63
Col8a1Q00780 Ap3m1-ps-201ENSMUST00000177652 1258 ntBASIC4.89□□□□□ -1.63
Col8a1Q00780 Gm5926-201ENSMUST00000177740 711 ntAPPRIS P1 BASIC4.89□□□□□ -1.63
Col8a1Q00780 Gm24407-201ENSMUST00000177864 141 ntBASIC4.89□□□□□ -1.63
Col8a1Q00780 Gm23568-201ENSMUST00000177960 92 ntBASIC4.89□□□□□ -1.63
Col8a1Q00780 Spin2f-201ENSMUST00000177990 765 ntAPPRIS P1 TSL 5 BASIC4.89□□□□□ -1.63
Col8a1Q00780 Gm24829-201ENSMUST00000179245 92 ntBASIC4.89□□□□□ -1.63
Col8a1Q00780 Spin2e-201ENSMUST00000179716 705 ntAPPRIS P1 BASIC4.89□□□□□ -1.63
Col8a1Q00780 Gm17946-201ENSMUST00000186856 538 ntBASIC4.89□□□□□ -1.63
Col8a1Q00780 Tardbp-223ENSMUST00000189048 1096 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
Col8a1Q00780 Gm44316-201ENSMUST00000199274 97 ntBASIC4.89□□□□□ -1.63
Col8a1Q00780 4930404A12Rik-201ENSMUST00000199356 726 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
Col8a1Q00780 Pvrig-ps-201ENSMUST00000199472 204 ntBASIC4.89□□□□□ -1.63
Col8a1Q00780 Gm10310-202ENSMUST00000213667 4661 ntAPPRIS P5 TSL 5 BASIC4.89□□□□□ -1.63
Col8a1Q00780 Supt4b-201ENSMUST00000214434 351 ntBASIC4.89□□□□□ -1.63
Col8a1Q00780 Gm11360-201ENSMUST00000221898 262 ntBASIC4.89□□□□□ -1.63
Col8a1Q00780 AL606472.1-201ENSMUST00000224628 275 ntBASIC4.89□□□□□ -1.63
Col8a1Q00780 AC164618.1-201ENSMUST00000225769 592 ntBASIC4.89□□□□□ -1.63
Col8a1Q00780 Fancd2-201ENSMUST00000036340 5512 ntAPPRIS P3 TSL 1 (best) BASIC4.89□□□□□ -1.63
Col8a1Q00780 Olfr697-201ENSMUST00000050541 1047 ntAPPRIS P1 BASIC4.89□□□□□ -1.63
Col8a1Q00780 Cox6b2-201ENSMUST00000063324 553 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
Col8a1Q00780 Magea6-201ENSMUST00000076986 1201 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
Col8a1Q00780 Snord15b-201ENSMUST00000083032 145 ntBASIC4.89□□□□□ -1.63
Col8a1Q00780 Gm25141-201ENSMUST00000083177 107 ntBASIC4.89□□□□□ -1.63
Col8a1Q00780 Gm9386-201ENSMUST00000095195 381 ntBASIC4.89□□□□□ -1.63
Col8a1Q00780 Defa-ps18-201ENSMUST00000098889 371 ntBASIC4.89□□□□□ -1.63
Col8a1Q00780 Olfr1049-201ENSMUST00000099899 953 ntAPPRIS P1 BASIC4.89□□□□□ -1.63
Col8a1Q00780 Bnip3l-202ENSMUST00000111115 3259 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
Col8a1Q00780 Ncf2-202ENSMUST00000186568 3550 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
Col8a1Q00780 Gm6288-201ENSMUST00000100778 1590 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
Col8a1Q00780 Gm45424-201ENSMUST00000210575 3300 ntBASIC4.89□□□□□ -1.63
Col8a1Q00780 Olfr1257-202ENSMUST00000111519 2756 ntAPPRIS P1 TSL 2 BASIC4.89□□□□□ -1.63
Col8a1Q00780 Olfr753-ps1-203ENSMUST00000208970 2764 ntAPPRIS P1 TSL 5 BASIC4.89□□□□□ -1.63
Col8a1Q00780 Olfr1217-204ENSMUST00000216592 3992 ntAPPRIS P1 TSL 5 BASIC4.89□□□□□ -1.63
Col8a1Q00780 Pign-206ENSMUST00000187537 4006 ntTSL 5 BASIC4.89□□□□□ -1.63
Col8a1Q00780 Brinp3-201ENSMUST00000074622 4023 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
Col8a1Q00780 Kcnma1-208ENSMUST00000177634 4605 ntTSL 5 BASIC4.89□□□□□ -1.63
Col8a1Q00780 Ankrd55-205ENSMUST00000223871 3209 ntBASIC4.89□□□□□ -1.63
Col8a1Q00780 Cept1-201ENSMUST00000039153 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC4.89□□□□□ -1.63
Col8a1Q00780 Gm38284-201ENSMUST00000194803 4539 ntBASIC4.89□□□□□ -1.63
Col8a1Q00780 Olfr1310-202ENSMUST00000213559 4897 ntAPPRIS P1 TSL 5 BASIC4.89□□□□□ -1.63
Col8a1Q00780 4930555F03Rik-202ENSMUST00000126285 3604 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
Col8a1Q00780 Gm32736-201ENSMUST00000200427 2701 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
Col8a1Q00780 Ptprd-201ENSMUST00000050757 4698 ntTSL 5 BASIC4.88□□□□□ -1.63
Col8a1Q00780 Impact-201ENSMUST00000025290 3432 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
Col8a1Q00780 AC164107.1-202ENSMUST00000228953 1816 ntBASIC4.88□□□□□ -1.63
Col8a1Q00780 Gm5796-201ENSMUST00000096184 1817 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
Col8a1Q00780 Olfr51-202ENSMUST00000213415 2819 ntAPPRIS P1 TSL 5 BASIC4.88□□□□□ -1.63
Col8a1Q00780 4932415D10Rik-201ENSMUST00000171401 3163 ntBASIC4.88□□□□□ -1.63
Col8a1Q00780 Zfhx4-201ENSMUST00000026284 13874 ntAPPRIS P2 TSL 5 BASIC4.88□□□□□ -1.63
Col8a1Q00780 Zfp871-201ENSMUST00000057501 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC4.88□□□□□ -1.63
Col8a1Q00780 Homer1-202ENSMUST00000079086 4287 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
Col8a1Q00780 Vmn2r113-201ENSMUST00000170322 2571 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
Col8a1Q00780 Gm12324-201ENSMUST00000130837 3753 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
Col8a1Q00780 Adgb-205ENSMUST00000179956 5218 ntAPPRIS ALT2 TSL 5 BASIC4.88□□□□□ -1.63
Col8a1Q00780 Gm42681-201ENSMUST00000197999 1611 ntBASIC4.88□□□□□ -1.63
Col8a1Q00780 Obox3-202ENSMUST00000095217 1603 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
Col8a1Q00780 Dnajc13-203ENSMUST00000186788 6747 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
Col8a1Q00780 Gm22656-201ENSMUST00000104199 171 ntBASIC4.88□□□□□ -1.63
Col8a1Q00780 Gm13349-201ENSMUST00000118436 411 ntBASIC4.88□□□□□ -1.63
Col8a1Q00780 Gm14867-201ENSMUST00000120156 866 ntBASIC4.88□□□□□ -1.63
Col8a1Q00780 Gm14392-201ENSMUST00000120332 401 ntBASIC4.88□□□□□ -1.63
Col8a1Q00780 Fyttd1-202ENSMUST00000120345 648 ntTSL 5 BASIC4.88□□□□□ -1.63
Col8a1Q00780 Olfr1172-ps1-201ENSMUST00000121530 192 ntBASIC4.88□□□□□ -1.63
Col8a1Q00780 Llph-ps2-201ENSMUST00000122000 393 ntBASIC4.88□□□□□ -1.63
Col8a1Q00780 Gm15691-201ENSMUST00000138626 849 ntTSL 3 BASIC4.88□□□□□ -1.63
Col8a1Q00780 Gm10319-202ENSMUST00000159439 846 ntBASIC4.88□□□□□ -1.63
Col8a1Q00780 R3hcc1l-202ENSMUST00000160107 950 ntAPPRIS ALT2 TSL 2 BASIC4.88□□□□□ -1.63
Col8a1Q00780 Gm10074-201ENSMUST00000174543 249 ntBASIC4.88□□□□□ -1.63
Col8a1Q00780 Gm21915-201ENSMUST00000177787 402 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
Col8a1Q00780 Gm25942-201ENSMUST00000180080 110 ntBASIC4.88□□□□□ -1.63
Col8a1Q00780 Gm26950-201ENSMUST00000182734 498 ntBASIC4.88□□□□□ -1.63
Col8a1Q00780 9430002A10Rik-202ENSMUST00000185395 475 ntBASIC4.88□□□□□ -1.63
Col8a1Q00780 1700007K09Rik-202ENSMUST00000188899 680 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
Col8a1Q00780 Gm37591-201ENSMUST00000193283 650 ntTSL 3 BASIC4.88□□□□□ -1.63
Col8a1Q00780 Gm37253-201ENSMUST00000195679 562 ntTSL 5 BASIC4.88□□□□□ -1.63
Col8a1Q00780 Gm43744-201ENSMUST00000196387 688 ntBASIC4.88□□□□□ -1.63
Col8a1Q00780 Gm43026-201ENSMUST00000202972 325 ntBASIC4.88□□□□□ -1.63
Col8a1Q00780 Gm44852-201ENSMUST00000207950 369 ntBASIC4.88□□□□□ -1.63
Col8a1Q00780 Gm4756-203ENSMUST00000208307 798 ntTSL 3 BASIC4.88□□□□□ -1.63
Col8a1Q00780 4930518J21Rik-201ENSMUST00000209557 573 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
Col8a1Q00780 AC101677.1-201ENSMUST00000218590 158 ntBASIC4.88□□□□□ -1.63
Col8a1Q00780 Gm46369-201ENSMUST00000221577 401 ntBASIC4.88□□□□□ -1.63
Col8a1Q00780 AC123705.4-202ENSMUST00000221602 697 ntTSL 2 BASIC4.88□□□□□ -1.63
Col8a1Q00780 AC154709.1-201ENSMUST00000222304 446 ntTSL 3 BASIC4.88□□□□□ -1.63
Col8a1Q00780 AC211878.2-201ENSMUST00000222486 488 ntBASIC4.88□□□□□ -1.63
Col8a1Q00780 Olfr476-201ENSMUST00000077249 933 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
Col8a1Q00780 Olfr1095-201ENSMUST00000099874 927 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
Col8a1Q00780 Olfr1000-201ENSMUST00000099921 945 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
Col8a1Q00780 Gm2987-201ENSMUST00000187673 1693 ntBASIC4.88□□□□□ -1.63
Col8a1Q00780 Daw1-202ENSMUST00000065436 1349 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
Col8a1Q00780 Wrn-202ENSMUST00000033991 6262 ntAPPRIS P1 TSL 5 BASIC4.88□□□□□ -1.63
Col8a1Q00780 Akap11-202ENSMUST00000123853 9364 ntAPPRIS P3 TSL 5 BASIC4.88□□□□□ -1.63
Col8a1Q00780 Med13-201ENSMUST00000043624 10546 ntAPPRIS P1 TSL 2 BASIC4.88□□□□□ -1.63
Col8a1Q00780 Gm26603-201ENSMUST00000181380 2861 ntTSL 5 BASIC4.88□□□□□ -1.63
Col8a1Q00780 Gm19035-201ENSMUST00000193299 1742 ntBASIC4.88□□□□□ -1.63
Col8a1Q00780 Zfp426-203ENSMUST00000163348 2135 ntAPPRIS ALT2 TSL 1 (best) BASIC4.88□□□□□ -1.63
Col8a1Q00780 Clca1-201ENSMUST00000029919 3655 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
Col8a1Q00780 Mbnl1-207ENSMUST00000192607 4552 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
Col8a1Q00780 Gm13089-201ENSMUST00000073532 1807 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
Retrieved 100 of 76,532 protein–RNA pairs in 68.8 ms