Protein–RNA interactions for Protein: P53564

Cux1, Homeobox protein cut-like 1, mousemouse

Predictions only

Length 1,515 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cux1P53564 Gm42680-201ENSMUST00000196238 2500 ntBASIC6.14□□□□□ -1.43
Cux1P53564 AC159193.1-201ENSMUST00000222872 2517 ntBASIC6.14□□□□□ -1.43
Cux1P53564 Skint3-202ENSMUST00000170945 3843 ntAPPRIS ALT2 TSL 1 (best) BASIC6.14□□□□□ -1.43
Cux1P53564 Vmn1r87-203ENSMUST00000227443 5319 ntAPPRIS P1 BASIC6.14□□□□□ -1.43
Cux1P53564 Mmrn1-201ENSMUST00000129603 4477 ntAPPRIS P3 TSL 1 (best) BASIC6.14□□□□□ -1.43
Cux1P53564 Malrd1-201ENSMUST00000146205 6738 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
Cux1P53564 Csnka2ip-202ENSMUST00000209382 2859 ntAPPRIS ALT2 TSL 5 BASIC6.14□□□□□ -1.43
Cux1P53564 Gm45885-202ENSMUST00000211520 1383 ntBASIC6.14□□□□□ -1.43
Cux1P53564 Eda2r-201ENSMUST00000037353 4752 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
Cux1P53564 Gm27254-201ENSMUST00000183926 517 ntBASIC6.14□□□□□ -1.43
Cux1P53564 Gm28997-201ENSMUST00000188759 429 ntBASIC6.14□□□□□ -1.43
Cux1P53564 Vmn1r35-201ENSMUST00000071414 891 ntAPPRIS P1 BASIC6.14□□□□□ -1.43
Cux1P53564 Tenm1-202ENSMUST00000115058 12837 ntAPPRIS ALT2 TSL 5 BASIC6.14□□□□□ -1.43
Cux1P53564 Vmn1r35-203ENSMUST00000227354 2319 ntAPPRIS P1 BASIC6.13□□□□□ -1.43
Cux1P53564 A630033H20Rik-206ENSMUST00000180182 2997 ntAPPRIS P1 TSL 2 BASIC6.13□□□□□ -1.43
Cux1P53564 Olfr362-202ENSMUST00000213817 4059 ntAPPRIS P1 TSL 5 BASIC6.13□□□□□ -1.43
Cux1P53564 Gm29506-201ENSMUST00000191045 2078 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
Cux1P53564 Gm40038-201ENSMUST00000197878 1370 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
Cux1P53564 Vmn1r217-202ENSMUST00000227110 9888 ntAPPRIS P1 BASIC6.13□□□□□ -1.43
Cux1P53564 Dbpht2-202ENSMUST00000221311 5341 ntBASIC6.13□□□□□ -1.43
Cux1P53564 Gm11216-201ENSMUST00000125240 354 ntTSL 5 BASIC6.13□□□□□ -1.43
Cux1P53564 E330011O21Rik-203ENSMUST00000210555 455 ntTSL 5 BASIC6.13□□□□□ -1.43
Cux1P53564 Olfr1484-204ENSMUST00000216014 3842 ntAPPRIS P1 TSL 2 BASIC6.13□□□□□ -1.43
Cux1P53564 AC126275.2-201ENSMUST00000225224 253 ntBASIC6.13□□□□□ -1.43
Cux1P53564 AC164883.9-201ENSMUST00000228042 399 ntBASIC6.13□□□□□ -1.43
Cux1P53564 Cdrt4-201ENSMUST00000035854 723 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
Cux1P53564 Olfr154-201ENSMUST00000099918 1079 ntAPPRIS P1 BASIC6.13□□□□□ -1.43
Cux1P53564 Gm34639-201ENSMUST00000222648 2241 ntTSL 5 BASIC6.13□□□□□ -1.43
Cux1P53564 Olfr1440-205ENSMUST00000216145 7542 ntAPPRIS P1 TSL 5 BASIC6.13□□□□□ -1.43
Cux1P53564 AI987944-204ENSMUST00000206801 1701 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
Cux1P53564 Med13-201ENSMUST00000043624 10546 ntAPPRIS P1 TSL 2 BASIC6.12□□□□□ -1.43
Cux1P53564 Hrnr-202ENSMUST00000093774 11187 ntAPPRIS ALT2 TSL 1 (best) BASIC6.12□□□□□ -1.43
Cux1P53564 Cep112os1-201ENSMUST00000137907 3005 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
Cux1P53564 Gm24127-201ENSMUST00000104110 130 ntBASIC6.12□□□□□ -1.43
Cux1P53564 Gm15026-201ENSMUST00000119219 458 ntBASIC6.12□□□□□ -1.43
Cux1P53564 n-R5s68-201ENSMUST00000122639 82 ntBASIC6.12□□□□□ -1.43
Cux1P53564 Gm28314-201ENSMUST00000191276 345 ntBASIC6.12□□□□□ -1.43
Cux1P53564 Igkv14-118-2-201ENSMUST00000198287 339 ntBASIC6.12□□□□□ -1.43
Cux1P53564 Igkv14-126-1-201ENSMUST00000199899 346 ntBASIC6.12□□□□□ -1.43
Cux1P53564 Olfr153-201ENSMUST00000217113 1258 ntAPPRIS P1 BASIC6.12□□□□□ -1.43
Cux1P53564 AC132465.3-201ENSMUST00000219326 195 ntBASIC6.12□□□□□ -1.43
Cux1P53564 Gm3565-201ENSMUST00000222670 609 ntBASIC6.12□□□□□ -1.43
Cux1P53564 Gm31592-201ENSMUST00000217529 3471 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
Cux1P53564 Gm44678-201ENSMUST00000207828 2775 ntBASIC6.12□□□□□ -1.43
Cux1P53564 Olfr112-205ENSMUST00000213274 3558 ntAPPRIS P1 TSL 5 BASIC6.12□□□□□ -1.43
Cux1P53564 Gm15262-202ENSMUST00000207320 5010 ntAPPRIS P1 TSL 5 BASIC6.12□□□□□ -1.43
Cux1P53564 Senp8-201ENSMUST00000051039 3682 ntAPPRIS P3 TSL 1 (best) BASIC6.12□□□□□ -1.43
Cux1P53564 Olfr437-202ENSMUST00000205175 2952 ntAPPRIS P1 TSL 5 BASIC6.12□□□□□ -1.43
Cux1P53564 Cep295-208ENSMUST00000161132 7605 ntAPPRIS ALT2 TSL 5 BASIC6.11□□□□□ -1.43
Cux1P53564 Lair1-201ENSMUST00000068865 6828 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
Cux1P53564 Gm43024-201ENSMUST00000196770 4352 ntBASIC6.11□□□□□ -1.43
Cux1P53564 Gm24376-201ENSMUST00000104399 127 ntBASIC6.11□□□□□ -1.43
Cux1P53564 Gm4991-201ENSMUST00000118899 1552 ntBASIC6.11□□□□□ -1.43
Cux1P53564 Gm11262-201ENSMUST00000119326 833 ntBASIC6.11□□□□□ -1.43
Cux1P53564 Gm15926-201ENSMUST00000120492 550 ntBASIC6.11□□□□□ -1.43
Cux1P53564 Gm15022-201ENSMUST00000122074 746 ntBASIC6.11□□□□□ -1.43
Cux1P53564 Gm26320-201ENSMUST00000157742 306 ntBASIC6.11□□□□□ -1.43
Cux1P53564 Gm22968-201ENSMUST00000157955 118 ntBASIC6.11□□□□□ -1.43
Cux1P53564 Vmn1r-ps32-201ENSMUST00000174389 956 ntBASIC6.11□□□□□ -1.43
Cux1P53564 Gm42428-201ENSMUST00000198677 302 ntBASIC6.11□□□□□ -1.43
Cux1P53564 Gm8748-201ENSMUST00000211125 587 ntBASIC6.11□□□□□ -1.43
Cux1P53564 AC153954.2-201ENSMUST00000213811 287 ntBASIC6.11□□□□□ -1.43
Cux1P53564 Gm7439-201ENSMUST00000214053 835 ntBASIC6.11□□□□□ -1.43
Cux1P53564 CT485612.3-201ENSMUST00000222179 408 ntBASIC6.11□□□□□ -1.43
Cux1P53564 Vmn1r42-203ENSMUST00000227279 4138 ntAPPRIS P1 BASIC6.11□□□□□ -1.43
Cux1P53564 Olfr1495-201ENSMUST00000061669 1089 ntAPPRIS P1 BASIC6.11□□□□□ -1.43
Cux1P53564 Vmn1r211-201ENSMUST00000073728 985 ntAPPRIS P1 BASIC6.11□□□□□ -1.43
Cux1P53564 Vmn1r6-205ENSMUST00000227631 7805 ntAPPRIS ALT2 BASIC6.11□□□□□ -1.43
Cux1P53564 Olfr1258-203ENSMUST00000213720 7098 ntAPPRIS P1 TSL 5 BASIC6.11□□□□□ -1.43
Cux1P53564 Olfr578-202ENSMUST00000215606 3665 ntAPPRIS P1 TSL 5 BASIC6.11□□□□□ -1.43
Cux1P53564 Gm13961-201ENSMUST00000119282 4772 ntBASIC6.11□□□□□ -1.43
Cux1P53564 Olfr1163-202ENSMUST00000215268 1611 ntAPPRIS P1 TSL 5 BASIC6.11□□□□□ -1.43
Cux1P53564 Gm43913-201ENSMUST00000203924 3029 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
Cux1P53564 Zfp942-201ENSMUST00000074295 1461 ntAPPRIS P1 TSL 5 BASIC6.11□□□□□ -1.43
Cux1P53564 Gm43588-201ENSMUST00000201862 2298 ntBASIC6.11□□□□□ -1.43
Cux1P53564 Herc2-202ENSMUST00000164095 15261 ntAPPRIS P2 TSL 1 (best) BASIC6.1□□□□□ -1.43
Cux1P53564 Igkv9-129-201ENSMUST00000103308 350 ntAPPRIS ALT2 BASIC6.1□□□□□ -1.43
Cux1P53564 Homer1-208ENSMUST00000109495 813 ntTSL 5 BASIC6.1□□□□□ -1.43
Cux1P53564 Gm14383-201ENSMUST00000121637 386 ntBASIC6.1□□□□□ -1.43
Cux1P53564 Gm22480-201ENSMUST00000122568 128 ntBASIC6.1□□□□□ -1.43
Cux1P53564 Cst12-202ENSMUST00000168443 546 ntAPPRIS P2 TSL 1 (best) BASIC6.1□□□□□ -1.43
Cux1P53564 Gm6900-201ENSMUST00000178971 342 ntBASIC6.1□□□□□ -1.43
Cux1P53564 Gm29588-201ENSMUST00000185738 298 ntBASIC6.1□□□□□ -1.43
Cux1P53564 Gm17916-203ENSMUST00000189918 324 ntTSL 5 BASIC6.1□□□□□ -1.43
Cux1P53564 Olfr625-ps1-202ENSMUST00000190218 927 ntAPPRIS ALT2 BASIC6.1□□□□□ -1.43
Cux1P53564 Gm43735-201ENSMUST00000198245 809 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
Cux1P53564 Gm45826-201ENSMUST00000212226 265 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
Cux1P53564 AC153816.1-201ENSMUST00000217870 764 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
Cux1P53564 CT025536.1-201ENSMUST00000226744 844 ntBASIC6.1□□□□□ -1.43
Cux1P53564 AC130547.1-201ENSMUST00000228079 1047 ntBASIC6.1□□□□□ -1.43
Cux1P53564 Olfr617-201ENSMUST00000048265 957 ntAPPRIS P1 BASIC6.1□□□□□ -1.43
Cux1P53564 Mup21-201ENSMUST00000077719 677 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
Cux1P53564 Gm5185-201ENSMUST00000080271 619 ntBASIC6.1□□□□□ -1.43
Cux1P53564 Mir30e-201ENSMUST00000083475 92 ntBASIC6.1□□□□□ -1.43
Cux1P53564 Gm43751-201ENSMUST00000200275 3071 ntBASIC6.1□□□□□ -1.43
Cux1P53564 Olfr788-202ENSMUST00000213222 4747 ntAPPRIS P1 TSL 5 BASIC6.1□□□□□ -1.43
Cux1P53564 Vmn2r86-201ENSMUST00000170257 3039 ntAPPRIS P1 TSL 5 BASIC6.1□□□□□ -1.43
Cux1P53564 Nebl-206ENSMUST00000131957 1709 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
Cux1P53564 Clvs1-201ENSMUST00000038841 3604 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
Cux1P53564 Foxr2-201ENSMUST00000096265 3210 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
Retrieved 100 of 76,532 protein–RNA pairs in 73.2 ms