Protein–RNA interactions for Protein: P50431

Shmt1, Serine hydroxymethyltransferase, cytosolic, mousemouse

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shmt1P50431 Dcun1d1-212ENSMUST00000198389 3020 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
Shmt1P50431 Gm14643-201ENSMUST00000144412 1848 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
Shmt1P50431 4933434E20Rik-201ENSMUST00000029551 3097 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
Shmt1P50431 Mmp12-203ENSMUST00000120655 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC5.39□□□□□ -1.55
Shmt1P50431 Mnat1-202ENSMUST00000187549 3688 ntTSL 5 BASIC5.38□□□□□ -1.55
Shmt1P50431 Pih1h3b-201ENSMUST00000044806 1509 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
Shmt1P50431 Gm31258-201ENSMUST00000194532 3297 ntBASIC5.38□□□□□ -1.55
Shmt1P50431 Olfr969-202ENSMUST00000213266 1597 ntAPPRIS P1 TSL 2 BASIC5.38□□□□□ -1.55
Shmt1P50431 Olfr1500-201ENSMUST00000067670 2092 ntAPPRIS P1 TSL 5 BASIC5.38□□□□□ -1.55
Shmt1P50431 Serpinb3b-202ENSMUST00000166100 1632 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
Shmt1P50431 Vmn2r107-201ENSMUST00000042090 2586 ntAPPRIS P1 TSL 5 BASIC5.38□□□□□ -1.55
Shmt1P50431 Gm830-201ENSMUST00000142458 3502 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
Shmt1P50431 Gm16794-201ENSMUST00000180727 2100 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
Shmt1P50431 Olfr668-202ENSMUST00000215359 3613 ntAPPRIS P1 TSL 5 BASIC5.38□□□□□ -1.55
Shmt1P50431 Kcnh7-201ENSMUST00000075052 13321 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
Shmt1P50431 AC151971.5-202ENSMUST00000215946 3188 ntTSL 5 BASIC5.38□□□□□ -1.55
Shmt1P50431 Gm3127-202ENSMUST00000171866 1758 ntAPPRIS P5 TSL 5 BASIC5.38□□□□□ -1.55
Shmt1P50431 Trbv12-1-201ENSMUST00000103267 389 ntAPPRIS P1 BASIC5.38□□□□□ -1.55
Shmt1P50431 Igkv10-94-201ENSMUST00000103330 347 ntAPPRIS P1 BASIC5.38□□□□□ -1.55
Shmt1P50431 Trav2-201ENSMUST00000103568 325 ntAPPRIS ALT2 BASIC5.38□□□□□ -1.55
Shmt1P50431 Gm22072-201ENSMUST00000116850 121 ntBASIC5.38□□□□□ -1.55
Shmt1P50431 Olfr260-ps1-201ENSMUST00000117279 822 ntBASIC5.38□□□□□ -1.55
Shmt1P50431 Gm15916-201ENSMUST00000118355 736 ntBASIC5.38□□□□□ -1.55
Shmt1P50431 Gm25293-201ENSMUST00000122792 285 ntBASIC5.38□□□□□ -1.55
Shmt1P50431 5730412P04Rik-201ENSMUST00000147100 1149 ntTSL 5 BASIC5.38□□□□□ -1.55
Shmt1P50431 Gm22312-201ENSMUST00000158005 130 ntBASIC5.38□□□□□ -1.55
Shmt1P50431 Vmn1r238-201ENSMUST00000165255 921 ntAPPRIS P1 BASIC5.38□□□□□ -1.55
Shmt1P50431 Gm17332-201ENSMUST00000165626 87 ntAPPRIS P1 BASIC5.38□□□□□ -1.55
Shmt1P50431 Gm18604-201ENSMUST00000172535 558 ntBASIC5.38□□□□□ -1.55
Shmt1P50431 Gm29550-201ENSMUST00000185543 285 ntBASIC5.38□□□□□ -1.55
Shmt1P50431 Gm28468-201ENSMUST00000188536 615 ntBASIC5.38□□□□□ -1.55
Shmt1P50431 Gm37492-201ENSMUST00000191948 376 ntBASIC5.38□□□□□ -1.55
Shmt1P50431 Ighv3-4-201ENSMUST00000193408 353 ntAPPRIS P1 BASIC5.38□□□□□ -1.55
Shmt1P50431 Gm2147-201ENSMUST00000193588 639 ntBASIC5.38□□□□□ -1.55
Shmt1P50431 Gm38109-201ENSMUST00000195386 181 ntBASIC5.38□□□□□ -1.55
Shmt1P50431 Gm43015-201ENSMUST00000199087 565 ntBASIC5.38□□□□□ -1.55
Shmt1P50431 4930404I20Rik-201ENSMUST00000203246 498 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
Shmt1P50431 Gm44857-201ENSMUST00000208331 196 ntBASIC5.38□□□□□ -1.55
Shmt1P50431 Olfr1311-201ENSMUST00000208536 943 ntAPPRIS P1 BASIC5.38□□□□□ -1.55
Shmt1P50431 Gm17766-201ENSMUST00000209223 442 ntBASIC5.38□□□□□ -1.55
Shmt1P50431 Gm32817-201ENSMUST00000210007 689 ntTSL 5 BASIC5.38□□□□□ -1.55
Shmt1P50431 Gm7639-201ENSMUST00000212608 484 ntBASIC5.38□□□□□ -1.55
Shmt1P50431 Olfr1073-ps1-202ENSMUST00000215705 478 ntBASIC5.38□□□□□ -1.55
Shmt1P50431 Gm19936-201ENSMUST00000216414 838 ntBASIC5.38□□□□□ -1.55
Shmt1P50431 Selenok-ps8-201ENSMUST00000221926 280 ntBASIC5.38□□□□□ -1.55
Shmt1P50431 AC211878.2-201ENSMUST00000222486 488 ntBASIC5.38□□□□□ -1.55
Shmt1P50431 Olfr1020-201ENSMUST00000055840 1079 ntAPPRIS P1 BASIC5.38□□□□□ -1.55
Shmt1P50431 Olfr164-201ENSMUST00000056727 1095 ntAPPRIS P1 BASIC5.38□□□□□ -1.55
Shmt1P50431 Mir17-201ENSMUST00000083574 84 ntBASIC5.38□□□□□ -1.55
Shmt1P50431 Olfr586-201ENSMUST00000084811 954 ntAPPRIS P2 BASIC5.38□□□□□ -1.55
Shmt1P50431 A630073D07Rik-201ENSMUST00000091791 484 ntAPPRIS P1 TSL 3 BASIC5.38□□□□□ -1.55
Shmt1P50431 Zfp78-204ENSMUST00000207347 3883 ntAPPRIS P4 TSL 1 (best) BASIC5.38□□□□□ -1.55
Shmt1P50431 Olfr351-203ENSMUST00000215137 2856 ntAPPRIS P1 TSL 5 BASIC5.38□□□□□ -1.55
Shmt1P50431 Depdc1a-203ENSMUST00000120272 3323 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
Shmt1P50431 Il13ra2-202ENSMUST00000112827 1536 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
Shmt1P50431 Vmn1r5-202ENSMUST00000226130 3393 ntAPPRIS P1 BASIC5.38□□□□□ -1.55
Shmt1P50431 Olfr109-202ENSMUST00000214668 5861 ntAPPRIS P1 TSL 5 BASIC5.38□□□□□ -1.55
Shmt1P50431 Atp7a-201ENSMUST00000055941 4866 ntAPPRIS ALT2 TSL 1 (best) BASIC5.37□□□□□ -1.55
Shmt1P50431 Gm37485-201ENSMUST00000192326 2953 ntBASIC5.37□□□□□ -1.55
Shmt1P50431 Gm20342-201ENSMUST00000185480 9720 ntBASIC5.37□□□□□ -1.55
Shmt1P50431 Ccar1-201ENSMUST00000020268 4352 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
Shmt1P50431 Gm6853-202ENSMUST00000211360 4375 ntTSL 5 BASIC5.37□□□□□ -1.55
Shmt1P50431 Tubal3-201ENSMUST00000021639 3096 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
Shmt1P50431 Vmn1r34-206ENSMUST00000228498 3078 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
Shmt1P50431 Satl1-201ENSMUST00000026601 2412 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
Shmt1P50431 Wnk3-206ENSMUST00000184730 5253 ntAPPRIS ALT2 TSL 1 (best) BASIC5.37□□□□□ -1.55
Shmt1P50431 Nlrp4a-202ENSMUST00000119386 3215 ntAPPRIS P2 TSL 1 (best) BASIC5.37□□□□□ -1.55
Shmt1P50431 Gm16513-201ENSMUST00000101023 2832 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
Shmt1P50431 Gm22591-201ENSMUST00000104243 106 ntBASIC5.37□□□□□ -1.55
Shmt1P50431 Gm9733-201ENSMUST00000108361 618 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
Shmt1P50431 Gm42606-201ENSMUST00000114209 239 ntBASIC5.37□□□□□ -1.55
Shmt1P50431 Gm15001-201ENSMUST00000117657 795 ntBASIC5.37□□□□□ -1.55
Shmt1P50431 Gm13503-201ENSMUST00000119017 446 ntBASIC5.37□□□□□ -1.55
Shmt1P50431 Gm14725-201ENSMUST00000120324 828 ntBASIC5.37□□□□□ -1.55
Shmt1P50431 Gm16254-201ENSMUST00000131528 730 ntBASIC5.37□□□□□ -1.55
Shmt1P50431 Xaf1-202ENSMUST00000140842 651 ntTSL 3 BASIC5.37□□□□□ -1.55
Shmt1P50431 Gm16345-201ENSMUST00000146065 158 ntBASIC5.37□□□□□ -1.55
Shmt1P50431 Gm12114-201ENSMUST00000147896 656 ntTSL 3 BASIC5.37□□□□□ -1.55
Shmt1P50431 Gm23754-201ENSMUST00000157576 63 ntBASIC5.37□□□□□ -1.55
Shmt1P50431 Gm23513-201ENSMUST00000158181 133 ntBASIC5.37□□□□□ -1.55
Shmt1P50431 Gm22836-201ENSMUST00000158441 61 ntBASIC5.37□□□□□ -1.55
Shmt1P50431 Igkv17-134-201ENSMUST00000168310 348 ntBASIC5.37□□□□□ -1.55
Shmt1P50431 Gm6647-201ENSMUST00000170514 641 ntBASIC5.37□□□□□ -1.55
Shmt1P50431 Gm20674-201ENSMUST00000177452 369 ntBASIC5.37□□□□□ -1.55
Shmt1P50431 Gm25525-201ENSMUST00000177701 107 ntBASIC5.37□□□□□ -1.55
Shmt1P50431 Gm26178-201ENSMUST00000177706 107 ntBASIC5.37□□□□□ -1.55
Shmt1P50431 Gm26465-201ENSMUST00000178517 107 ntBASIC5.37□□□□□ -1.55
Shmt1P50431 Gm24317-201ENSMUST00000178536 107 ntBASIC5.37□□□□□ -1.55
Shmt1P50431 Gm25021-201ENSMUST00000179184 107 ntBASIC5.37□□□□□ -1.55
Shmt1P50431 Gm22995-201ENSMUST00000179670 107 ntBASIC5.37□□□□□ -1.55
Shmt1P50431 Gm24424-201ENSMUST00000179714 107 ntBASIC5.37□□□□□ -1.55
Shmt1P50431 Gm24389-201ENSMUST00000179962 107 ntBASIC5.37□□□□□ -1.55
Shmt1P50431 Gm25672-201ENSMUST00000180111 107 ntBASIC5.37□□□□□ -1.55
Shmt1P50431 4930509E16Rik-201ENSMUST00000181405 1191 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
Shmt1P50431 Gm8676-201ENSMUST00000184206 637 ntBASIC5.37□□□□□ -1.55
Shmt1P50431 Gm27235-201ENSMUST00000184431 903 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
Shmt1P50431 Gm29322-201ENSMUST00000185378 582 ntTSL 5 BASIC5.37□□□□□ -1.55
Shmt1P50431 Gm3454-201ENSMUST00000185571 412 ntBASIC5.37□□□□□ -1.55
Shmt1P50431 Gm29163-201ENSMUST00000188029 107 ntBASIC5.37□□□□□ -1.55
Shmt1P50431 Gm43171-201ENSMUST00000199882 291 ntBASIC5.37□□□□□ -1.55
Retrieved 100 of 76,532 protein–RNA pairs in 91.3 ms