Protein–RNA interactions for Protein: P48377

Rfx1, MHC class II regulatory factor RFX1, mousemouse

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx1P48377 Gm6228-201ENSMUST00000178856 1386 ntBASIC6.6□□□□□ -1.35
Rfx1P48377 Gm6221-201ENSMUST00000180064 1386 ntBASIC6.6□□□□□ -1.35
Rfx1P48377 Gm6645-201ENSMUST00000118505 2726 ntBASIC6.6□□□□□ -1.35
Rfx1P48377 Vmn2r121-201ENSMUST00000094491 3062 ntAPPRIS P1 TSL 5 BASIC6.6□□□□□ -1.35
Rfx1P48377 Olfr560-201ENSMUST00000210453 2168 ntAPPRIS P1 TSL 5 BASIC6.6□□□□□ -1.35
Rfx1P48377 Nlrp5-202ENSMUST00000086341 3471 ntAPPRIS ALT2 TSL 1 (best) BASIC6.6□□□□□ -1.35
Rfx1P48377 Gm5141-201ENSMUST00000167516 1743 ntTSL 5 BASIC6.6□□□□□ -1.35
Rfx1P48377 Arl13a-201ENSMUST00000064476 1740 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
Rfx1P48377 Rps24-201ENSMUST00000112384 468 ntAPPRIS ALT1 TSL 5 BASIC6.6□□□□□ -1.35
Rfx1P48377 Cav1-203ENSMUST00000115454 613 ntTSL 2 BASIC6.6□□□□□ -1.35
Rfx1P48377 Gm14772-201ENSMUST00000116562 514 ntBASIC6.6□□□□□ -1.35
Rfx1P48377 Gm16431-201ENSMUST00000117454 431 ntBASIC6.6□□□□□ -1.35
Rfx1P48377 Gm11878-201ENSMUST00000117908 400 ntBASIC6.6□□□□□ -1.35
Rfx1P48377 Rps24-ps3-201ENSMUST00000118723 402 ntBASIC6.6□□□□□ -1.35
Rfx1P48377 Gm14517-201ENSMUST00000119040 337 ntBASIC6.6□□□□□ -1.35
Rfx1P48377 Gm16423-201ENSMUST00000120078 947 ntBASIC6.6□□□□□ -1.35
Rfx1P48377 Sel1l2-201ENSMUST00000120133 579 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
Rfx1P48377 Gm2005-201ENSMUST00000120759 542 ntBASIC6.6□□□□□ -1.35
Rfx1P48377 Gm12890-201ENSMUST00000120885 373 ntBASIC6.6□□□□□ -1.35
Rfx1P48377 Gm6591-201ENSMUST00000121063 434 ntBASIC6.6□□□□□ -1.35
Rfx1P48377 Gm14808-201ENSMUST00000129259 361 ntTSL 3 BASIC6.6□□□□□ -1.35
Rfx1P48377 Gm14974-201ENSMUST00000139112 804 ntTSL 3 BASIC6.6□□□□□ -1.35
Rfx1P48377 Gm24767-201ENSMUST00000158509 95 ntBASIC6.6□□□□□ -1.35
Rfx1P48377 Gm14527-201ENSMUST00000179300 639 ntBASIC6.6□□□□□ -1.35
Rfx1P48377 Gm8392-201ENSMUST00000185647 835 ntBASIC6.6□□□□□ -1.35
Rfx1P48377 Scgb2b6-201ENSMUST00000188132 330 ntBASIC6.6□□□□□ -1.35
Rfx1P48377 Gm37253-201ENSMUST00000195679 562 ntTSL 5 BASIC6.6□□□□□ -1.35
Rfx1P48377 Gm43541-201ENSMUST00000197208 581 ntBASIC6.6□□□□□ -1.35
Rfx1P48377 Gm44997-202ENSMUST00000205970 425 ntTSL 3 BASIC6.6□□□□□ -1.35
Rfx1P48377 Spcs2-202ENSMUST00000207063 727 ntTSL 2 BASIC6.6□□□□□ -1.35
Rfx1P48377 AC157494.1-201ENSMUST00000221127 549 ntTSL 5 BASIC6.6□□□□□ -1.35
Rfx1P48377 AC153662.1-201ENSMUST00000222220 270 ntBASIC6.6□□□□□ -1.35
Rfx1P48377 Tmed10-203ENSMUST00000222585 619 ntTSL 3 BASIC6.6□□□□□ -1.35
Rfx1P48377 AC173481.1-201ENSMUST00000223351 270 ntBASIC6.6□□□□□ -1.35
Rfx1P48377 AC192333.2-201ENSMUST00000224771 196 ntBASIC6.6□□□□□ -1.35
Rfx1P48377 AC109172.1-201ENSMUST00000227503 187 ntBASIC6.6□□□□□ -1.35
Rfx1P48377 AC163295.1-201ENSMUST00000227840 314 ntBASIC6.6□□□□□ -1.35
Rfx1P48377 AC154738.4-201ENSMUST00000228310 414 ntBASIC6.6□□□□□ -1.35
Rfx1P48377 Dopey1-201ENSMUST00000034987 8933 ntAPPRIS P1 TSL 5 BASIC6.6□□□□□ -1.35
Rfx1P48377 Olfr1013-201ENSMUST00000065626 918 ntAPPRIS P1 BASIC6.6□□□□□ -1.35
Rfx1P48377 Gm26206-201ENSMUST00000082908 110 ntBASIC6.6□□□□□ -1.35
Rfx1P48377 Gm24043-201ENSMUST00000083108 116 ntBASIC6.6□□□□□ -1.35
Rfx1P48377 Gm23502-201ENSMUST00000083902 145 ntBASIC6.6□□□□□ -1.35
Rfx1P48377 Cnot4-207ENSMUST00000202417 3296 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
Rfx1P48377 Olfr970-202ENSMUST00000213975 1630 ntAPPRIS P1 TSL 5 BASIC6.6□□□□□ -1.35
Rfx1P48377 Akap11-201ENSMUST00000022593 5688 ntAPPRIS ALT2 TSL 5 BASIC6.6□□□□□ -1.35
Rfx1P48377 Ankrd49-202ENSMUST00000214456 3207 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
Rfx1P48377 Olfr250-202ENSMUST00000216168 3969 ntAPPRIS ALT2 TSL 5 BASIC6.6□□□□□ -1.35
Rfx1P48377 Neb-201ENSMUST00000028320 10298 ntTSL 5 BASIC6.6□□□□□ -1.35
Rfx1P48377 Far1-202ENSMUST00000067929 4935 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
Rfx1P48377 Med13-201ENSMUST00000043624 10546 ntAPPRIS P1 TSL 2 BASIC6.6□□□□□ -1.35
Rfx1P48377 Vmn1r35-202ENSMUST00000227346 1854 ntBASIC6.6□□□□□ -1.35
Rfx1P48377 Olfr1416-202ENSMUST00000214928 4838 ntAPPRIS P1 TSL 3 BASIC6.6□□□□□ -1.35
Rfx1P48377 Fbxw16-201ENSMUST00000084984 1497 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
Rfx1P48377 Ttc37-205ENSMUST00000224386 6976 ntAPPRIS P1 BASIC6.6□□□□□ -1.35
Rfx1P48377 Gm3978-201ENSMUST00000163406 2512 ntBASIC6.59□□□□□ -1.35
Rfx1P48377 Olfr774-202ENSMUST00000203248 1429 ntAPPRIS P1 TSL 3 BASIC6.59□□□□□ -1.35
Rfx1P48377 Gm38224-201ENSMUST00000191648 2100 ntBASIC6.59□□□□□ -1.35
Rfx1P48377 Cxcl15-201ENSMUST00000031322 2127 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
Rfx1P48377 4930431P03Rik-202ENSMUST00000166127 4237 ntTSL 2 BASIC6.59□□□□□ -1.35
Rfx1P48377 Olfr109-202ENSMUST00000214668 5861 ntAPPRIS P1 TSL 5 BASIC6.59□□□□□ -1.35
Rfx1P48377 Lrriq3-202ENSMUST00000192383 1717 ntAPPRIS ALT2 TSL 1 (best) BASIC6.59□□□□□ -1.35
Rfx1P48377 Olfr1250-203ENSMUST00000215730 4632 ntAPPRIS P1 TSL 5 BASIC6.59□□□□□ -1.35
Rfx1P48377 Olfr1466-202ENSMUST00000207124 1981 ntAPPRIS P1 TSL 3 BASIC6.59□□□□□ -1.35
Rfx1P48377 Slc28a2-203ENSMUST00000110525 3911 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
Rfx1P48377 Olfr1031-202ENSMUST00000216807 1946 ntAPPRIS P1 TSL 5 BASIC6.59□□□□□ -1.35
Rfx1P48377 Ireb2-201ENSMUST00000034843 5770 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
Rfx1P48377 Mir680-1-201ENSMUST00000102257 109 ntBASIC6.59□□□□□ -1.35
Rfx1P48377 Igkv4-59-201ENSMUST00000103354 368 ntAPPRIS P1 BASIC6.59□□□□□ -1.35
Rfx1P48377 Ccdc7b-203ENSMUST00000108745 1047 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
Rfx1P48377 Gm9112-201ENSMUST00000113610 420 ntAPPRIS P1 TSL 2 BASIC6.59□□□□□ -1.35
Rfx1P48377 Scgb1b22-ps-201ENSMUST00000116008 280 ntBASIC6.59□□□□□ -1.35
Rfx1P48377 Gm11774-201ENSMUST00000118601 293 ntBASIC6.59□□□□□ -1.35
Rfx1P48377 Gm13785-201ENSMUST00000119099 690 ntBASIC6.59□□□□□ -1.35
Rfx1P48377 Gm14472-201ENSMUST00000119815 282 ntBASIC6.59□□□□□ -1.35
Rfx1P48377 Gm16017-201ENSMUST00000119834 208 ntBASIC6.59□□□□□ -1.35
Rfx1P48377 Gm12691-201ENSMUST00000120186 456 ntBASIC6.59□□□□□ -1.35
Rfx1P48377 Gm14977-201ENSMUST00000121626 812 ntBASIC6.59□□□□□ -1.35
Rfx1P48377 Gm14366-201ENSMUST00000121970 730 ntBASIC6.59□□□□□ -1.35
Rfx1P48377 Xlr5e-ps-201ENSMUST00000122043 711 ntBASIC6.59□□□□□ -1.35
Rfx1P48377 n-R5s19-201ENSMUST00000122793 120 ntBASIC6.59□□□□□ -1.35
Rfx1P48377 Gm24175-201ENSMUST00000158931 129 ntBASIC6.59□□□□□ -1.35
Rfx1P48377 Gm23806-201ENSMUST00000175157 109 ntBASIC6.59□□□□□ -1.35
Rfx1P48377 Gm19932-201ENSMUST00000177033 313 ntBASIC6.59□□□□□ -1.35
Rfx1P48377 Gm2916-201ENSMUST00000178392 384 ntAPPRIS P1 TSL 5 BASIC6.59□□□□□ -1.35
Rfx1P48377 Gm10251-201ENSMUST00000178788 384 ntAPPRIS P1 TSL 5 BASIC6.59□□□□□ -1.35
Rfx1P48377 Gm10410-201ENSMUST00000180138 384 ntBASIC6.59□□□□□ -1.35
Rfx1P48377 1810022K09Rik-203ENSMUST00000185423 278 ntTSL 3 BASIC6.59□□□□□ -1.35
Rfx1P48377 Smr2-203ENSMUST00000196477 676 ntAPPRIS ALT2 TSL 1 (best) BASIC6.59□□□□□ -1.35
Rfx1P48377 Gm42924-201ENSMUST00000197261 185 ntBASIC6.59□□□□□ -1.35
Rfx1P48377 Gm43344-201ENSMUST00000198723 1229 ntBASIC6.59□□□□□ -1.35
Rfx1P48377 Gm18194-201ENSMUST00000210455 481 ntBASIC6.59□□□□□ -1.35
Rfx1P48377 AC155634.2-201ENSMUST00000222001 489 ntTSL 3 BASIC6.59□□□□□ -1.35
Rfx1P48377 Gm6068-201ENSMUST00000222270 387 ntBASIC6.59□□□□□ -1.35
Rfx1P48377 AC113198.1-201ENSMUST00000226353 832 ntBASIC6.59□□□□□ -1.35
Rfx1P48377 AC166574.3-201ENSMUST00000226725 367 ntBASIC6.59□□□□□ -1.35
Rfx1P48377 Olfr1450-201ENSMUST00000082006 978 ntAPPRIS P1 BASIC6.59□□□□□ -1.35
Rfx1P48377 Smr2-201ENSMUST00000087043 676 ntAPPRIS P3 TSL 1 (best) BASIC6.59□□□□□ -1.35
Rfx1P48377 Gm10717-202ENSMUST00000099042 669 ntAPPRIS P5 TSL 5 BASIC6.59□□□□□ -1.35
Rfx1P48377 Olfr1167-201ENSMUST00000099832 1100 ntAPPRIS P1 BASIC6.59□□□□□ -1.35
Retrieved 100 of 76,532 protein–RNA pairs in 104.1 ms