Protein–RNA interactions for Protein: P40224

Cxcl12, Stromal cell-derived factor 1, mousemouse

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcl12P40224 CT025536.1-201ENSMUST00000226744 844 ntBASIC4.33□□□□□ -1.72
Cxcl12P40224 Cyp2c38-201ENSMUST00000035488 2869 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
Cxcl12P40224 Efhc2-201ENSMUST00000026014 2554 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
Cxcl12P40224 Gm45792-201ENSMUST00000207795 4268 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
Cxcl12P40224 Fgf14-202ENSMUST00000095529 3608 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
Cxcl12P40224 Akap6-201ENSMUST00000095737 14847 ntAPPRIS P2 TSL 1 (best) BASIC4.33□□□□□ -1.72
Cxcl12P40224 Gpr141-201ENSMUST00000065335 3433 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
Cxcl12P40224 E330016L19Rik-201ENSMUST00000140614 1959 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
Cxcl12P40224 Ccnb3-202ENSMUST00000115752 4554 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
Cxcl12P40224 Olfr586-202ENSMUST00000211075 4562 ntAPPRIS ALT2 TSL 5 BASIC4.33□□□□□ -1.72
Cxcl12P40224 Olfr228-202ENSMUST00000217292 1854 ntAPPRIS P1 TSL 5 BASIC4.32□□□□□ -1.72
Cxcl12P40224 Rnf213-202ENSMUST00000131035 16716 ntAPPRIS P5 TSL 5 BASIC4.32□□□□□ -1.72
Cxcl12P40224 Rnf213-201ENSMUST00000093902 16716 ntAPPRIS ALT2 TSL 5 BASIC4.32□□□□□ -1.72
Cxcl12P40224 Slc19a3-201ENSMUST00000045560 2974 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
Cxcl12P40224 Vmn1r235-201ENSMUST00000060603 1781 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
Cxcl12P40224 Olfr397-202ENSMUST00000213134 4048 ntAPPRIS P1 TSL 5 BASIC4.32□□□□□ -1.72
Cxcl12P40224 Gm45304-201ENSMUST00000210303 2828 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
Cxcl12P40224 Cntn6-201ENSMUST00000089215 3702 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
Cxcl12P40224 Olfr911-ps1-202ENSMUST00000216496 3576 ntAPPRIS P1 TSL 5 BASIC4.32□□□□□ -1.72
Cxcl12P40224 Tex47-202ENSMUST00000159546 1402 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
Cxcl12P40224 Gm4736-201ENSMUST00000100870 380 ntBASIC4.32□□□□□ -1.72
Cxcl12P40224 Gm22115-201ENSMUST00000103976 133 ntBASIC4.32□□□□□ -1.72
Cxcl12P40224 Gm23923-201ENSMUST00000104108 133 ntBASIC4.32□□□□□ -1.72
Cxcl12P40224 Olfr1196-201ENSMUST00000104892 945 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
Cxcl12P40224 Gm23226-201ENSMUST00000116927 103 ntBASIC4.32□□□□□ -1.72
Cxcl12P40224 Gm12571-201ENSMUST00000118132 243 ntBASIC4.32□□□□□ -1.72
Cxcl12P40224 4933416E03Rik-201ENSMUST00000133091 1126 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
Cxcl12P40224 Gm15461-201ENSMUST00000143488 235 ntTSL 3 BASIC4.32□□□□□ -1.72
Cxcl12P40224 Gm22320-201ENSMUST00000157149 312 ntBASIC4.32□□□□□ -1.72
Cxcl12P40224 Gm22857-201ENSMUST00000174969 134 ntBASIC4.32□□□□□ -1.72
Cxcl12P40224 Gm25535-201ENSMUST00000175364 125 ntBASIC4.32□□□□□ -1.72
Cxcl12P40224 Gm26579-201ENSMUST00000181656 918 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
Cxcl12P40224 Gm27762-201ENSMUST00000183417 109 ntBASIC4.32□□□□□ -1.72
Cxcl12P40224 Gm37603-201ENSMUST00000192368 219 ntBASIC4.32□□□□□ -1.72
Cxcl12P40224 Gm17781-201ENSMUST00000195232 649 ntBASIC4.32□□□□□ -1.72
Cxcl12P40224 Gm37830-201ENSMUST00000195282 837 ntTSL 5 BASIC4.32□□□□□ -1.72
Cxcl12P40224 Gm7587-201ENSMUST00000207618 1021 ntBASIC4.32□□□□□ -1.72
Cxcl12P40224 Olfr1486-ps1-201ENSMUST00000208835 220 ntBASIC4.32□□□□□ -1.72
Cxcl12P40224 Gm45086-201ENSMUST00000209052 462 ntTSL 5 BASIC4.32□□□□□ -1.72
Cxcl12P40224 Gm8231-201ENSMUST00000221617 783 ntBASIC4.32□□□□□ -1.72
Cxcl12P40224 AC151730.2-201ENSMUST00000224027 475 ntBASIC4.32□□□□□ -1.72
Cxcl12P40224 AL606513.1-201ENSMUST00000225369 579 ntBASIC4.32□□□□□ -1.72
Cxcl12P40224 AC154727.1-201ENSMUST00000226537 499 ntBASIC4.32□□□□□ -1.72
Cxcl12P40224 Olfr1153-201ENSMUST00000052300 957 ntBASIC4.32□□□□□ -1.72
Cxcl12P40224 Olfr1369-ps1-201ENSMUST00000079050 954 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
Cxcl12P40224 Clec9a-202ENSMUST00000088075 1020 ntAPPRIS P3 TSL 1 (best) BASIC4.32□□□□□ -1.72
Cxcl12P40224 Olfr1197-201ENSMUST00000099815 945 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
Cxcl12P40224 Vmn1r169-204ENSMUST00000227932 2745 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
Cxcl12P40224 AC120375.2-201ENSMUST00000226532 1853 ntBASIC4.32□□□□□ -1.72
Cxcl12P40224 Gm45176-201ENSMUST00000207696 4096 ntBASIC4.32□□□□□ -1.72
Cxcl12P40224 Gm42946-201ENSMUST00000196108 2570 ntBASIC4.32□□□□□ -1.72
Cxcl12P40224 Oog4-202ENSMUST00000073641 1817 ntAPPRIS ALT2 TSL 1 (best) BASIC4.32□□□□□ -1.72
Cxcl12P40224 Ddx3y-201ENSMUST00000091190 4600 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
Cxcl12P40224 Macc1-201ENSMUST00000048880 3818 ntAPPRIS P1 TSL 5 BASIC4.32□□□□□ -1.72
Cxcl12P40224 Gm5346-201ENSMUST00000056023 2326 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
Cxcl12P40224 Olfr698-204ENSMUST00000216255 4024 ntAPPRIS P1 TSL 5 BASIC4.31□□□□□ -1.72
Cxcl12P40224 Gm29260-201ENSMUST00000186391 2759 ntTSL 3 BASIC4.31□□□□□ -1.72
Cxcl12P40224 Olfr907-203ENSMUST00000214264 1910 ntAPPRIS P1 TSL 5 BASIC4.31□□□□□ -1.72
Cxcl12P40224 Platr25-204ENSMUST00000221996 2458 ntAPPRIS ALT2 TSL 2 BASIC4.31□□□□□ -1.72
Cxcl12P40224 Gm37733-201ENSMUST00000195478 2962 ntBASIC4.31□□□□□ -1.72
Cxcl12P40224 Zfp968-203ENSMUST00000131676 1272 ntAPPRIS P1 TSL 2 BASIC4.31□□□□□ -1.72
Cxcl12P40224 Vmn1r-ps32-201ENSMUST00000174389 956 ntBASIC4.31□□□□□ -1.72
Cxcl12P40224 Gm27022-201ENSMUST00000183225 715 ntTSL 3 BASIC4.31□□□□□ -1.72
Cxcl12P40224 Gm8282-201ENSMUST00000187559 483 ntBASIC4.31□□□□□ -1.72
Cxcl12P40224 Gm28830-201ENSMUST00000188192 213 ntBASIC4.31□□□□□ -1.72
Cxcl12P40224 Vmn2r-ps149-201ENSMUST00000188423 590 ntBASIC4.31□□□□□ -1.72
Cxcl12P40224 Gm28997-201ENSMUST00000188759 429 ntBASIC4.31□□□□□ -1.72
Cxcl12P40224 Gm36994-201ENSMUST00000192941 492 ntBASIC4.31□□□□□ -1.72
Cxcl12P40224 Gm6057-201ENSMUST00000195927 314 ntBASIC4.31□□□□□ -1.72
Cxcl12P40224 4930425K10Rik-201ENSMUST00000201190 745 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
Cxcl12P40224 Gm8748-201ENSMUST00000211125 587 ntBASIC4.31□□□□□ -1.72
Cxcl12P40224 Olfr27-202ENSMUST00000216405 1125 ntAPPRIS P1 TSL 5 BASIC4.31□□□□□ -1.72
Cxcl12P40224 Gm7119-201ENSMUST00000221345 695 ntBASIC4.31□□□□□ -1.72
Cxcl12P40224 Dapl1-201ENSMUST00000028369 573 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
Cxcl12P40224 Olfr167-201ENSMUST00000054606 939 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
Cxcl12P40224 Gm7988-201ENSMUST00000196623 2297 ntBASIC4.31□□□□□ -1.72
Cxcl12P40224 Rab30-201ENSMUST00000032879 9456 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
Cxcl12P40224 2310003L06Rik-201ENSMUST00000007601 1603 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
Cxcl12P40224 Elavl2-208ENSMUST00000107120 4191 ntTSL 5 BASIC4.31□□□□□ -1.72
Cxcl12P40224 Fbxw21-201ENSMUST00000054925 1512 ntAPPRIS P2 TSL 1 (best) BASIC4.31□□□□□ -1.72
Cxcl12P40224 Olfr1484-203ENSMUST00000215567 3699 ntAPPRIS P1 TSL 5 BASIC4.31□□□□□ -1.72
Cxcl12P40224 Olfr808-202ENSMUST00000203236 4523 ntAPPRIS P1 TSL 2 BASIC4.31□□□□□ -1.72
Cxcl12P40224 Gm38057-201ENSMUST00000195551 3203 ntBASIC4.31□□□□□ -1.72
Cxcl12P40224 Gm42841-201ENSMUST00000199806 1932 ntBASIC4.31□□□□□ -1.72
Cxcl12P40224 Gm20631-201ENSMUST00000177239 5697 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
Cxcl12P40224 Olfr406-203ENSMUST00000217016 2651 ntAPPRIS P1 TSL 5 BASIC4.3□□□□□ -1.72
Cxcl12P40224 Vmn1r52-207ENSMUST00000228394 3069 ntAPPRIS P1 BASIC4.3□□□□□ -1.72
Cxcl12P40224 Ptprq-201ENSMUST00000050702 7393 ntAPPRIS P1 TSL 2 BASIC4.3□□□□□ -1.72
Cxcl12P40224 Gm14062-201ENSMUST00000134795 4134 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
Cxcl12P40224 BC055308-201ENSMUST00000193380 2538 ntBASIC4.3□□□□□ -1.72
Cxcl12P40224 Gm43065-201ENSMUST00000198971 2092 ntBASIC4.3□□□□□ -1.72
Cxcl12P40224 Gm11970-201ENSMUST00000116105 320 ntBASIC4.3□□□□□ -1.72
Cxcl12P40224 Gm6461-201ENSMUST00000120015 633 ntBASIC4.3□□□□□ -1.72
Cxcl12P40224 Gm12885-201ENSMUST00000122246 328 ntBASIC4.3□□□□□ -1.72
Cxcl12P40224 Amy2a1-201ENSMUST00000132353 890 ntAPPRIS P1 TSL 2 BASIC4.3□□□□□ -1.72
Cxcl12P40224 Crem-231ENSMUST00000152108 654 ntTSL 5 BASIC4.3□□□□□ -1.72
Cxcl12P40224 Gm22156-201ENSMUST00000158409 141 ntBASIC4.3□□□□□ -1.72
Cxcl12P40224 Gm22135-201ENSMUST00000158752 108 ntBASIC4.3□□□□□ -1.72
Cxcl12P40224 Gm8890-202ENSMUST00000177727 465 ntAPPRIS ALT2 TSL 5 BASIC4.3□□□□□ -1.72
Cxcl12P40224 Gm27457-201ENSMUST00000184771 156 ntBASIC4.3□□□□□ -1.72
Retrieved 100 of 76,532 protein–RNA pairs in 90.5 ms