Protein–RNA interactions for Protein: P39428

Traf1, TNF receptor-associated factor 1, mousemouse

Predictions only

Length 409 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Traf1P39428 Gm45029-201ENSMUST00000208702 391 ntTSL 5 BASIC5.23□□□□□ -1.57
Traf1P39428 Gm45639-201ENSMUST00000211205 710 ntTSL 5 BASIC5.23□□□□□ -1.57
Traf1P39428 AC158641.1-201ENSMUST00000218933 229 ntBASIC5.23□□□□□ -1.57
Traf1P39428 AC132344.1-201ENSMUST00000221289 376 ntTSL 3 BASIC5.23□□□□□ -1.57
Traf1P39428 Olfr437-201ENSMUST00000060243 1018 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
Traf1P39428 Olfr134-201ENSMUST00000074883 939 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
Traf1P39428 Olfr884-201ENSMUST00000077732 930 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
Traf1P39428 Ssxb3-202ENSMUST00000089379 604 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
Traf1P39428 Clca4c-ps-201ENSMUST00000098551 712 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
Traf1P39428 Gm43200-201ENSMUST00000200385 2161 ntBASIC5.23□□□□□ -1.57
Traf1P39428 Gm37639-201ENSMUST00000191623 2785 ntBASIC5.23□□□□□ -1.57
Traf1P39428 Peli1-202ENSMUST00000101477 3703 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
Traf1P39428 Olfr1355-201ENSMUST00000078414 3317 ntAPPRIS P1 TSL 2 BASIC5.23□□□□□ -1.57
Traf1P39428 Olfr1311-202ENSMUST00000213602 2631 ntAPPRIS P1 TSL 5 BASIC5.23□□□□□ -1.57
Traf1P39428 Zp3r-201ENSMUST00000039862 2042 ntAPPRIS P2 TSL 1 (best) BASIC5.23□□□□□ -1.57
Traf1P39428 Ogt-201ENSMUST00000044475 5384 ntAPPRIS P3 TSL 1 (best) BASIC5.23□□□□□ -1.57
Traf1P39428 Gm7903-201ENSMUST00000113172 3677 ntAPPRIS P2 TSL 1 (best) BASIC5.22□□□□□ -1.57
Traf1P39428 Gm5128-201ENSMUST00000113173 3677 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
Traf1P39428 Cacnb4-202ENSMUST00000102760 7872 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
Traf1P39428 Gpr21-201ENSMUST00000065441 3619 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
Traf1P39428 Gm14929-201ENSMUST00000152079 1850 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
Traf1P39428 Olfr916-203ENSMUST00000214093 3685 ntAPPRIS P1 TSL 3 BASIC5.22□□□□□ -1.57
Traf1P39428 Gm40621-202ENSMUST00000217378 1470 ntTSL 5 BASIC5.22□□□□□ -1.57
Traf1P39428 Obox4-ps27-201ENSMUST00000179203 1362 ntBASIC5.22□□□□□ -1.57
Traf1P39428 Cp-203ENSMUST00000108325 3183 ntAPPRIS ALT2 TSL 5 BASIC5.22□□□□□ -1.57
Traf1P39428 Fam135a-206ENSMUST00000187369 4976 ntAPPRIS ALT2 TSL 5 BASIC5.22□□□□□ -1.57
Traf1P39428 Cybb-201ENSMUST00000015484 4752 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
Traf1P39428 Gm14750-201ENSMUST00000118262 516 ntBASIC5.22□□□□□ -1.57
Traf1P39428 Gm11433-201ENSMUST00000118318 228 ntBASIC5.22□□□□□ -1.57
Traf1P39428 Gm13459-201ENSMUST00000121558 646 ntBASIC5.22□□□□□ -1.57
Traf1P39428 Gm14500-201ENSMUST00000121647 113 ntBASIC5.22□□□□□ -1.57
Traf1P39428 Gm15735-201ENSMUST00000136187 514 ntTSL 3 BASIC5.22□□□□□ -1.57
Traf1P39428 Gm17159-201ENSMUST00000169043 482 ntBASIC5.22□□□□□ -1.57
Traf1P39428 Gm29053-201ENSMUST00000187484 370 ntTSL 5 BASIC5.22□□□□□ -1.57
Traf1P39428 Gm5252-201ENSMUST00000189030 909 ntBASIC5.22□□□□□ -1.57
Traf1P39428 Gm9989-202ENSMUST00000193125 258 ntTSL 3 BASIC5.22□□□□□ -1.57
Traf1P39428 Gm37021-201ENSMUST00000195835 663 ntTSL 5 BASIC5.22□□□□□ -1.57
Traf1P39428 Gm44521-201ENSMUST00000206469 217 ntBASIC5.22□□□□□ -1.57
Traf1P39428 Olfr1295-202ENSMUST00000207786 1043 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
Traf1P39428 AC156504.1-201ENSMUST00000214608 157 ntBASIC5.22□□□□□ -1.57
Traf1P39428 AC153912.1-201ENSMUST00000217011 724 ntAPPRIS P1 TSL 3 BASIC5.22□□□□□ -1.57
Traf1P39428 AC158807.1-201ENSMUST00000217959 187 ntBASIC5.22□□□□□ -1.57
Traf1P39428 CAAA01052029.1-201ENSMUST00000218410 271 ntBASIC5.22□□□□□ -1.57
Traf1P39428 AC159252.1-201ENSMUST00000224450 553 ntBASIC5.22□□□□□ -1.57
Traf1P39428 AC129935.1-201ENSMUST00000226302 873 ntBASIC5.22□□□□□ -1.57
Traf1P39428 AC124408.1-201ENSMUST00000228938 707 ntBASIC5.22□□□□□ -1.57
Traf1P39428 H2al3-201ENSMUST00000057113 553 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
Traf1P39428 5430402E10Rik-201ENSMUST00000063127 798 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
Traf1P39428 Tas2r140-201ENSMUST00000095391 1000 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
Traf1P39428 Gm43888-201ENSMUST00000204405 2587 ntBASIC5.22□□□□□ -1.57
Traf1P39428 Mmp16-201ENSMUST00000029881 5011 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
Traf1P39428 Cpa3-201ENSMUST00000001921 1449 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
Traf1P39428 Olfr310-202ENSMUST00000217724 1400 ntAPPRIS P1 TSL 5 BASIC5.22□□□□□ -1.57
Traf1P39428 Kbtbd8-202ENSMUST00000119582 4518 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
Traf1P39428 Olfr414-202ENSMUST00000192358 4526 ntAPPRIS P1 TSL 2 BASIC5.22□□□□□ -1.57
Traf1P39428 Olfr1493-ps1-201ENSMUST00000207208 1777 ntAPPRIS P1 TSL 5 BASIC5.21□□□□□ -1.57
Traf1P39428 AC155805.1-201ENSMUST00000222419 3808 ntBASIC5.21□□□□□ -1.57
Traf1P39428 Gm42616-201ENSMUST00000198989 4184 ntBASIC5.21□□□□□ -1.57
Traf1P39428 Cfap97-206ENSMUST00000164504 4521 ntAPPRIS P2 TSL 1 (best) BASIC5.21□□□□□ -1.57
Traf1P39428 Olfr1353-203ENSMUST00000205193 1924 ntAPPRIS P1 TSL 5 BASIC5.21□□□□□ -1.57
Traf1P39428 Fus-202ENSMUST00000079045 2623 ntBASIC5.21□□□□□ -1.58
Traf1P39428 Mir147-201ENSMUST00000102354 79 ntBASIC5.21□□□□□ -1.58
Traf1P39428 Mir761-201ENSMUST00000103245 76 ntBASIC5.21□□□□□ -1.58
Traf1P39428 Gm14444-202ENSMUST00000109070 1281 ntAPPRIS P1 TSL 3 BASIC5.21□□□□□ -1.58
Traf1P39428 Gm12062-201ENSMUST00000117533 259 ntBASIC5.21□□□□□ -1.58
Traf1P39428 Gm14388-201ENSMUST00000118119 477 ntBASIC5.21□□□□□ -1.58
Traf1P39428 Gm12909-201ENSMUST00000134190 620 ntTSL 2 BASIC5.21□□□□□ -1.58
Traf1P39428 9130015L21Rik-201ENSMUST00000140319 606 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
Traf1P39428 Ugt2a2-202ENSMUST00000144144 929 ntTSL 2 BASIC5.21□□□□□ -1.58
Traf1P39428 Vmn1r113-201ENSMUST00000168794 894 ntTSL 5 BASIC5.21□□□□□ -1.58
Traf1P39428 Gm22395-201ENSMUST00000177427 96 ntBASIC5.21□□□□□ -1.58
Traf1P39428 Gm27036-201ENSMUST00000182465 980 ntBASIC5.21□□□□□ -1.58
Traf1P39428 Gm27022-201ENSMUST00000183225 715 ntTSL 3 BASIC5.21□□□□□ -1.58
Traf1P39428 Gm6802-202ENSMUST00000186566 126 ntBASIC5.21□□□□□ -1.58
Traf1P39428 1700027A15Rik-205ENSMUST00000191122 332 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
Traf1P39428 Ighv8-1-201ENSMUST00000194897 291 ntBASIC5.21□□□□□ -1.58
Traf1P39428 Gm19080-201ENSMUST00000196082 550 ntBASIC5.21□□□□□ -1.58
Traf1P39428 Gm38991-201ENSMUST00000205504 138 ntTSL 5 BASIC5.21□□□□□ -1.58
Traf1P39428 Gm8556-201ENSMUST00000210437 664 ntBASIC5.21□□□□□ -1.58
Traf1P39428 Gm6171-201ENSMUST00000220760 645 ntBASIC5.21□□□□□ -1.58
Traf1P39428 AC159622.3-201ENSMUST00000221010 361 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
Traf1P39428 Gm34215-202ENSMUST00000223024 492 ntTSL 5 BASIC5.21□□□□□ -1.58
Traf1P39428 Creg1-201ENSMUST00000040298 425 ntTSL 3 BASIC5.21□□□□□ -1.58
Traf1P39428 Prl2c1-201ENSMUST00000054932 681 ntAPPRIS P2 TSL 5 BASIC5.21□□□□□ -1.58
Traf1P39428 Polk-202ENSMUST00000091387 2382 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
Traf1P39428 Gm28940-201ENSMUST00000187929 1682 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
Traf1P39428 5330437M03Rik-201ENSMUST00000201318 4083 ntBASIC5.21□□□□□ -1.58
Traf1P39428 AC153964.1-201ENSMUST00000219677 3142 ntBASIC5.21□□□□□ -1.58
Traf1P39428 Fscb-201ENSMUST00000059833 3361 ntAPPRIS P1 BASIC5.21□□□□□ -1.58
Traf1P39428 Gm42551-201ENSMUST00000197701 1573 ntBASIC5.21□□□□□ -1.58
Traf1P39428 Ckap5-204ENSMUST00000111338 6665 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
Traf1P39428 Olfr1318-205ENSMUST00000217533 3747 ntAPPRIS P1 TSL 5 BASIC5.2□□□□□ -1.58
Traf1P39428 Gm9432-201ENSMUST00000117810 759 ntBASIC5.2□□□□□ -1.58
Traf1P39428 Gm12392-201ENSMUST00000118014 938 ntBASIC5.2□□□□□ -1.58
Traf1P39428 Klra14-ps-201ENSMUST00000119532 802 ntBASIC5.2□□□□□ -1.58
Traf1P39428 Gm13902-201ENSMUST00000120168 605 ntBASIC5.2□□□□□ -1.58
Traf1P39428 Gm14589-201ENSMUST00000121640 727 ntBASIC5.2□□□□□ -1.58
Traf1P39428 Gm23789-201ENSMUST00000122536 301 ntBASIC5.2□□□□□ -1.58
Traf1P39428 Gm13348-201ENSMUST00000147324 690 ntTSL 5 BASIC5.2□□□□□ -1.58
Traf1P39428 Nell1os-203ENSMUST00000152166 410 ntTSL 2 BASIC5.2□□□□□ -1.58
Retrieved 100 of 76,532 protein–RNA pairs in 88.8 ms