Protein–RNA interactions for Protein: P20040

H-2 class II histocompatibility antigen, E-Q beta chain, mousemouse

Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P20040 Mga-204ENSMUST00000110774 13931 ntAPPRIS P3 TSL 5 BASIC3.87□□□□□ -1.79
P20040 Primpol-201ENSMUST00000040468 3772 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
P20040 Gm16579-201ENSMUST00000161985 2566 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
P20040 Gm43844-201ENSMUST00000202926 5605 ntBASIC3.87□□□□□ -1.79
P20040 Syne2-201ENSMUST00000044217 21690 ntAPPRIS P2 TSL 5 BASIC3.87□□□□□ -1.79
P20040 Olfr1270-202ENSMUST00000213946 4930 ntAPPRIS P1 TSL 5 BASIC3.87□□□□□ -1.79
P20040 Arhgap18-201ENSMUST00000039557 3651 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
P20040 Vmn2r-ps5-201ENSMUST00000175971 2730 ntBASIC3.86□□□□□ -1.79
P20040 Vmn2r-ps11-201ENSMUST00000176568 2730 ntBASIC3.86□□□□□ -1.79
P20040 Olfr510-203ENSMUST00000216331 3101 ntAPPRIS P1 TSL 5 BASIC3.86□□□□□ -1.79
P20040 B3galt1-201ENSMUST00000042456 2855 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
P20040 Traj31-201ENSMUST00000103710 57 ntAPPRIS P1 BASIC3.86□□□□□ -1.79
P20040 Gm24469-201ENSMUST00000104487 131 ntBASIC3.86□□□□□ -1.79
P20040 Gm11262-201ENSMUST00000119326 833 ntBASIC3.86□□□□□ -1.79
P20040 Gm14500-201ENSMUST00000121647 113 ntBASIC3.86□□□□□ -1.79
P20040 Gm14649-201ENSMUST00000121814 324 ntBASIC3.86□□□□□ -1.79
P20040 Gm14288-202ENSMUST00000123863 267 ntAPPRIS ALT2 TSL 2 BASIC3.86□□□□□ -1.79
P20040 Gm15762-201ENSMUST00000126447 333 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
P20040 Gm3160-201ENSMUST00000128343 607 ntBASIC3.86□□□□□ -1.79
P20040 Gm12609-201ENSMUST00000129908 610 ntTSL 2 BASIC3.86□□□□□ -1.79
P20040 Mllt3-207ENSMUST00000148059 422 ntTSL 5 BASIC3.86□□□□□ -1.79
P20040 Sox5os5-201ENSMUST00000152192 207 ntTSL 3 BASIC3.86□□□□□ -1.79
P20040 Gm24898-201ENSMUST00000158133 106 ntBASIC3.86□□□□□ -1.79
P20040 1700058P15Rik-201ENSMUST00000159981 413 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
P20040 Gm17066-202ENSMUST00000165350 1113 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
P20040 Samd15-201ENSMUST00000169669 1194 ntBASIC3.86□□□□□ -1.79
P20040 Gm6214-201ENSMUST00000178845 541 ntBASIC3.86□□□□□ -1.79
P20040 Gm19427-201ENSMUST00000183619 208 ntBASIC3.86□□□□□ -1.79
P20040 Gm27568-201ENSMUST00000184220 99 ntBASIC3.86□□□□□ -1.79
P20040 Gm27564-201ENSMUST00000185196 96 ntBASIC3.86□□□□□ -1.79
P20040 1700003C15Rik-201ENSMUST00000185360 1224 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
P20040 1700057G04Rik-206ENSMUST00000185580 842 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
P20040 9330118I20Rik-201ENSMUST00000203390 1066 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
P20040 Gm31532-201ENSMUST00000203555 767 ntBASIC3.86□□□□□ -1.79
P20040 Gm43892-201ENSMUST00000204373 265 ntBASIC3.86□□□□□ -1.79
P20040 1700065L07Rik-201ENSMUST00000204961 614 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
P20040 1700011C11Rik-201ENSMUST00000205268 365 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
P20040 Gm38832-201ENSMUST00000205674 400 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
P20040 Gm3338-201ENSMUST00000220982 269 ntBASIC3.86□□□□□ -1.79
P20040 4930442G10Rik-202ENSMUST00000221968 1096 ntTSL 5 BASIC3.86□□□□□ -1.79
P20040 AC102435.1-201ENSMUST00000222199 908 ntTSL 5 BASIC3.86□□□□□ -1.79
P20040 Krtap31-2-201ENSMUST00000058761 935 ntAPPRIS P1 BASIC3.86□□□□□ -1.79
P20040 Olfr846-201ENSMUST00000078774 942 ntAPPRIS P1 BASIC3.86□□□□□ -1.79
P20040 Zfp300-201ENSMUST00000040667 4634 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
P20040 Gm43341-201ENSMUST00000200104 1308 ntBASIC3.86□□□□□ -1.79
P20040 Fbxw23-202ENSMUST00000198480 1388 ntBASIC3.86□□□□□ -1.79
P20040 Vmn1r171-203ENSMUST00000226321 3067 ntAPPRIS ALT2 BASIC3.86□□□□□ -1.79
P20040 Dnah12-201ENSMUST00000022433 12009 ntAPPRIS P1 TSL 5 BASIC3.85□□□□□ -1.79
P20040 Olfr728-202ENSMUST00000213685 7087 ntAPPRIS P1 TSL 5 BASIC3.85□□□□□ -1.79
P20040 Fam135a-206ENSMUST00000187369 4976 ntAPPRIS ALT2 TSL 5 BASIC3.85□□□□□ -1.79
P20040 Frmpd3-201ENSMUST00000044702 3141 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
P20040 Olfr970-203ENSMUST00000215922 1739 ntAPPRIS P1 TSL 3 BASIC3.85□□□□□ -1.79
P20040 Gm42876-201ENSMUST00000196989 3215 ntBASIC3.85□□□□□ -1.79
P20040 Igkv4-61-201ENSMUST00000103353 284 ntAPPRIS P1 BASIC3.85□□□□□ -1.79
P20040 Traj11-201ENSMUST00000103730 59 ntAPPRIS P1 BASIC3.85□□□□□ -1.79
P20040 Gm14878-201ENSMUST00000118167 293 ntBASIC3.85□□□□□ -1.79
P20040 Rpl27-ps2-201ENSMUST00000120378 399 ntBASIC3.85□□□□□ -1.79
P20040 Gm16019-201ENSMUST00000149538 261 ntTSL 5 BASIC3.85□□□□□ -1.79
P20040 Mir1947-201ENSMUST00000158235 85 ntBASIC3.85□□□□□ -1.79
P20040 Gm18128-201ENSMUST00000172625 511 ntBASIC3.85□□□□□ -1.79
P20040 Vmn1r173-201ENSMUST00000174055 942 ntAPPRIS P1 BASIC3.85□□□□□ -1.79
P20040 Gm15143-201ENSMUST00000178180 714 ntBASIC3.85□□□□□ -1.79
P20040 Gm22243-201ENSMUST00000178754 120 ntBASIC3.85□□□□□ -1.79
P20040 Hmgb1-ps8-201ENSMUST00000181542 626 ntBASIC3.85□□□□□ -1.79
P20040 Mir7031-201ENSMUST00000183860 65 ntBASIC3.85□□□□□ -1.79
P20040 Gm18406-201ENSMUST00000185872 669 ntBASIC3.85□□□□□ -1.79
P20040 Gm38283-201ENSMUST00000193041 695 ntBASIC3.85□□□□□ -1.79
P20040 Gm37670-201ENSMUST00000193622 229 ntBASIC3.85□□□□□ -1.79
P20040 Gm38080-201ENSMUST00000194035 268 ntBASIC3.85□□□□□ -1.79
P20040 Gm42999-201ENSMUST00000198049 786 ntBASIC3.85□□□□□ -1.79
P20040 Trav7-5-201ENSMUST00000200609 337 ntAPPRIS P1 BASIC3.85□□□□□ -1.79
P20040 Gm43449-201ENSMUST00000202955 371 ntTSL 3 BASIC3.85□□□□□ -1.79
P20040 Gm44054-201ENSMUST00000203814 372 ntBASIC3.85□□□□□ -1.79
P20040 Gm45032-201ENSMUST00000205375 520 ntBASIC3.85□□□□□ -1.79
P20040 Gm44736-201ENSMUST00000205943 667 ntTSL 3 BASIC3.85□□□□□ -1.79
P20040 Gm45659-201ENSMUST00000209295 564 ntTSL 2 BASIC3.85□□□□□ -1.79
P20040 AC158955.1-201ENSMUST00000227140 385 ntBASIC3.85□□□□□ -1.79
P20040 Gm25739-201ENSMUST00000082886 107 ntBASIC3.85□□□□□ -1.79
P20040 Gm23510-201ENSMUST00000083083 163 ntBASIC3.85□□□□□ -1.79
P20040 Olfr593-201ENSMUST00000098206 984 ntAPPRIS P2 BASIC3.85□□□□□ -1.79
P20040 Olfr1162-201ENSMUST00000099837 945 ntAPPRIS P1 BASIC3.85□□□□□ -1.79
P20040 Fscb-201ENSMUST00000059833 3361 ntAPPRIS P1 BASIC3.85□□□□□ -1.79
P20040 Gm37192-201ENSMUST00000194479 1348 ntBASIC3.85□□□□□ -1.79
P20040 Angptl3-201ENSMUST00000030280 1482 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
P20040 Gm14014-201ENSMUST00000156718 2717 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
P20040 Gm16421-201ENSMUST00000117616 1557 ntBASIC3.85□□□□□ -1.79
P20040 Vmn2r-ps82-201ENSMUST00000174222 1641 ntBASIC3.84□□□□□ -1.79
P20040 Ifi208-202ENSMUST00000169857 1767 ntAPPRIS P1 TSL 5 BASIC3.84□□□□□ -1.79
P20040 Klhl13-204ENSMUST00000115317 3216 ntAPPRIS ALT1 TSL 5 BASIC3.84□□□□□ -1.79
P20040 Gm26869-201ENSMUST00000181241 3523 ntTSL 2 BASIC3.84□□□□□ -1.79
P20040 A530099J19Rik-201ENSMUST00000151029 2764 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
P20040 Gm45697-201ENSMUST00000212893 2876 ntBASIC3.84□□□□□ -1.79
P20040 Gm14933-201ENSMUST00000118840 481 ntBASIC3.84□□□□□ -1.79
P20040 Gm10059-201ENSMUST00000131139 171 ntBASIC3.84□□□□□ -1.79
P20040 Gm12214-201ENSMUST00000151643 417 ntTSL 5 BASIC3.84□□□□□ -1.79
P20040 Gm24444-201ENSMUST00000157244 308 ntBASIC3.84□□□□□ -1.79
P20040 Gm25271-201ENSMUST00000157273 290 ntBASIC3.84□□□□□ -1.79
P20040 D6Ertd474e-203ENSMUST00000160188 683 ntTSL 3 BASIC3.84□□□□□ -1.79
P20040 Gm3077-201ENSMUST00000165903 627 ntBASIC3.84□□□□□ -1.79
P20040 Gm3173-203ENSMUST00000166848 396 ntAPPRIS ALT2 TSL 5 BASIC3.84□□□□□ -1.79
Retrieved 100 of 76,532 protein–RNA pairs in 80.7 ms