Protein–RNA interactions for Protein: P0C0A3

Chmp6, Charged multivesicular body protein 6, mousemouse

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp6P0C0A3 Smim15-204ENSMUST00000224390 645 ntAPPRIS P1 BASIC4.59□□□□□ -1.67
Chmp6P0C0A3 AC154329.1-201ENSMUST00000224408 3129 ntBASIC4.59□□□□□ -1.67
Chmp6P0C0A3 AC154562.1-201ENSMUST00000226140 966 ntBASIC4.59□□□□□ -1.67
Chmp6P0C0A3 Olfr178-201ENSMUST00000058564 960 ntAPPRIS P1 BASIC4.59□□□□□ -1.67
Chmp6P0C0A3 Olfr768-201ENSMUST00000063031 939 ntAPPRIS P1 BASIC4.59□□□□□ -1.67
Chmp6P0C0A3 Olfr781-201ENSMUST00000075613 936 ntAPPRIS P1 BASIC4.59□□□□□ -1.67
Chmp6P0C0A3 Olfr846-201ENSMUST00000078774 942 ntAPPRIS P1 BASIC4.59□□□□□ -1.67
Chmp6P0C0A3 Vmn1r32-201ENSMUST00000079584 2833 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
Chmp6P0C0A3 Rpl21-ps14-201ENSMUST00000080279 483 ntBASIC4.59□□□□□ -1.67
Chmp6P0C0A3 Mir383-201ENSMUST00000083523 70 ntBASIC4.59□□□□□ -1.67
Chmp6P0C0A3 Olfr1109-201ENSMUST00000099863 939 ntAPPRIS P1 BASIC4.59□□□□□ -1.67
Chmp6P0C0A3 Dst-203ENSMUST00000115104 23279 ntAPPRIS ALT2 TSL 5 BASIC4.59□□□□□ -1.68
Chmp6P0C0A3 Zfp11-201ENSMUST00000049778 3929 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.68
Chmp6P0C0A3 Fsd1l-203ENSMUST00000132151 7467 ntAPPRIS P2 TSL 5 BASIC4.59□□□□□ -1.68
Chmp6P0C0A3 Fscb-201ENSMUST00000059833 3361 ntAPPRIS P1 BASIC4.59□□□□□ -1.68
Chmp6P0C0A3 Vmn1r171-203ENSMUST00000226321 3067 ntAPPRIS ALT2 BASIC4.59□□□□□ -1.68
Chmp6P0C0A3 Tenm1-202ENSMUST00000115058 12837 ntAPPRIS ALT2 TSL 5 BASIC4.59□□□□□ -1.68
Chmp6P0C0A3 Polk-205ENSMUST00000221899 2319 ntAPPRIS ALT2 TSL 1 (best) BASIC4.58□□□□□ -1.68
Chmp6P0C0A3 Olfr933-202ENSMUST00000216238 4475 ntAPPRIS P1 TSL 2 BASIC4.58□□□□□ -1.68
Chmp6P0C0A3 Synpr-207ENSMUST00000223583 3362 ntBASIC4.58□□□□□ -1.68
Chmp6P0C0A3 Vmn1r47-202ENSMUST00000227229 6733 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
Chmp6P0C0A3 Vmn1r47-204ENSMUST00000228680 6717 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
Chmp6P0C0A3 4930510E17Rik-201ENSMUST00000034550 1639 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
Chmp6P0C0A3 Vmn1r195-202ENSMUST00000228711 3056 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
Chmp6P0C0A3 Zfp788-201ENSMUST00000045720 3058 ntAPPRIS ALT2 TSL 1 (best) BASIC4.58□□□□□ -1.68
Chmp6P0C0A3 Olfr1026-202ENSMUST00000217615 1538 ntAPPRIS P1 TSL 5 BASIC4.58□□□□□ -1.68
Chmp6P0C0A3 Olfr705-202ENSMUST00000213721 3001 ntAPPRIS P1 TSL 5 BASIC4.58□□□□□ -1.68
Chmp6P0C0A3 Pds5b-203ENSMUST00000110486 2900 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
Chmp6P0C0A3 Gm26717-201ENSMUST00000181713 1418 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
Chmp6P0C0A3 Gm4596-201ENSMUST00000117197 442 ntBASIC4.58□□□□□ -1.68
Chmp6P0C0A3 Gm15426-201ENSMUST00000117823 556 ntBASIC4.58□□□□□ -1.68
Chmp6P0C0A3 Gm13550-201ENSMUST00000118185 525 ntBASIC4.58□□□□□ -1.68
Chmp6P0C0A3 Cyp2j7-ps2-201ENSMUST00000119189 179 ntBASIC4.58□□□□□ -1.68
Chmp6P0C0A3 Gm15923-201ENSMUST00000119300 1169 ntBASIC4.58□□□□□ -1.68
Chmp6P0C0A3 Gm11398-201ENSMUST00000120330 320 ntBASIC4.58□□□□□ -1.68
Chmp6P0C0A3 Gm15517-201ENSMUST00000124863 251 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
Chmp6P0C0A3 2210408F21Rik-206ENSMUST00000138653 417 ntTSL 5 BASIC4.58□□□□□ -1.68
Chmp6P0C0A3 Gm17091-201ENSMUST00000163248 357 ntBASIC4.58□□□□□ -1.68
Chmp6P0C0A3 Gm28859-201ENSMUST00000186650 616 ntBASIC4.58□□□□□ -1.68
Chmp6P0C0A3 Gm28786-201ENSMUST00000187228 172 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
Chmp6P0C0A3 Gm29556-201ENSMUST00000187591 696 ntBASIC4.58□□□□□ -1.68
Chmp6P0C0A3 Csn2-209ENSMUST00000199624 890 ntAPPRIS P3 TSL 5 BASIC4.58□□□□□ -1.68
Chmp6P0C0A3 Gm43645-201ENSMUST00000200129 341 ntTSL 2 BASIC4.58□□□□□ -1.68
Chmp6P0C0A3 Gm5373-201ENSMUST00000212113 1050 ntBASIC4.58□□□□□ -1.68
Chmp6P0C0A3 AC154241.1-201ENSMUST00000223952 356 ntBASIC4.58□□□□□ -1.68
Chmp6P0C0A3 AC154634.3-201ENSMUST00000224589 736 ntBASIC4.58□□□□□ -1.68
Chmp6P0C0A3 AC168881.1-201ENSMUST00000226018 430 ntBASIC4.58□□□□□ -1.68
Chmp6P0C0A3 AC150560.2-201ENSMUST00000227208 171 ntBASIC4.58□□□□□ -1.68
Chmp6P0C0A3 Csn2-201ENSMUST00000082370 1117 ntAPPRIS ALT2 TSL 1 (best) BASIC4.58□□□□□ -1.68
Chmp6P0C0A3 Gm27162-201ENSMUST00000185169 2478 ntTSL 2 BASIC4.58□□□□□ -1.68
Chmp6P0C0A3 Nlrp2-201ENSMUST00000045022 3404 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
Chmp6P0C0A3 Olfr247-202ENSMUST00000215871 1983 ntAPPRIS P5 TSL 5 BASIC4.58□□□□□ -1.68
Chmp6P0C0A3 Gm37668-201ENSMUST00000193745 1944 ntBASIC4.58□□□□□ -1.68
Chmp6P0C0A3 AC158605.2-201ENSMUST00000220287 2726 ntAPPRIS P1 TSL 2 BASIC4.58□□□□□ -1.68
Chmp6P0C0A3 Cfhr1-201ENSMUST00000023965 1793 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
Chmp6P0C0A3 Gm26869-201ENSMUST00000181241 3523 ntTSL 2 BASIC4.58□□□□□ -1.68
Chmp6P0C0A3 Nbeal1-203ENSMUST00000160834 15731 ntAPPRIS P1 TSL 5 BASIC4.58□□□□□ -1.68
Chmp6P0C0A3 Fam205c-202ENSMUST00000107978 1451 ntAPPRIS ALT2 TSL 1 (best) BASIC4.57□□□□□ -1.68
Chmp6P0C0A3 Olfr1049-202ENSMUST00000216185 1471 ntAPPRIS P1 TSL 5 BASIC4.57□□□□□ -1.68
Chmp6P0C0A3 Vmn2r-ps2-201ENSMUST00000121053 765 ntBASIC4.57□□□□□ -1.68
Chmp6P0C0A3 Gm8200-201ENSMUST00000122390 222 ntBASIC4.57□□□□□ -1.68
Chmp6P0C0A3 Gm25106-201ENSMUST00000122672 134 ntBASIC4.57□□□□□ -1.68
Chmp6P0C0A3 Gm23905-201ENSMUST00000157568 109 ntBASIC4.57□□□□□ -1.68
Chmp6P0C0A3 Gm16285-201ENSMUST00000162999 347 ntBASIC4.57□□□□□ -1.68
Chmp6P0C0A3 Gm16558-201ENSMUST00000163015 532 ntBASIC4.57□□□□□ -1.68
Chmp6P0C0A3 Gm25037-201ENSMUST00000175418 110 ntBASIC4.57□□□□□ -1.68
Chmp6P0C0A3 Gm16430-202ENSMUST00000178145 703 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
Chmp6P0C0A3 Rfpl4b-201ENSMUST00000179279 1054 ntAPPRIS P1 TSL 5 BASIC4.57□□□□□ -1.68
Chmp6P0C0A3 Gm16405-202ENSMUST00000180150 703 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
Chmp6P0C0A3 Gm26962-201ENSMUST00000182545 265 ntTSL 3 BASIC4.57□□□□□ -1.68
Chmp6P0C0A3 Mir6960-201ENSMUST00000183449 61 ntBASIC4.57□□□□□ -1.68
Chmp6P0C0A3 1700003C15Rik-202ENSMUST00000188236 710 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
Chmp6P0C0A3 Gm29428-201ENSMUST00000190086 409 ntBASIC4.57□□□□□ -1.68
Chmp6P0C0A3 Gm37837-201ENSMUST00000191743 604 ntBASIC4.57□□□□□ -1.68
Chmp6P0C0A3 Gm5995-201ENSMUST00000204107 1273 ntBASIC4.57□□□□□ -1.68
Chmp6P0C0A3 Gm44234-201ENSMUST00000204246 900 ntBASIC4.57□□□□□ -1.68
Chmp6P0C0A3 Gm19039-201ENSMUST00000204363 575 ntBASIC4.57□□□□□ -1.68
Chmp6P0C0A3 Gm43892-201ENSMUST00000204373 265 ntBASIC4.57□□□□□ -1.68
Chmp6P0C0A3 Olfr747-202ENSMUST00000205373 1132 ntAPPRIS P1 TSL 5 BASIC4.57□□□□□ -1.68
Chmp6P0C0A3 Gm20074-201ENSMUST00000208144 484 ntBASIC4.57□□□□□ -1.68
Chmp6P0C0A3 Gm45604-201ENSMUST00000209665 550 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
Chmp6P0C0A3 Gm8556-201ENSMUST00000210437 664 ntBASIC4.57□□□□□ -1.68
Chmp6P0C0A3 AC132433.1-201ENSMUST00000221553 1101 ntBASIC4.57□□□□□ -1.68
Chmp6P0C0A3 AC117202.1-201ENSMUST00000227007 445 ntBASIC4.57□□□□□ -1.68
Chmp6P0C0A3 AC160756.1-201ENSMUST00000227266 235 ntBASIC4.57□□□□□ -1.68
Chmp6P0C0A3 CT573086.3-201ENSMUST00000228762 594 ntBASIC4.57□□□□□ -1.68
Chmp6P0C0A3 n-R5s160-201ENSMUST00000083096 120 ntBASIC4.57□□□□□ -1.68
Chmp6P0C0A3 Olfr1100-201ENSMUST00000094913 969 ntAPPRIS P1 BASIC4.57□□□□□ -1.68
Chmp6P0C0A3 Olfr1061-201ENSMUST00000099889 942 ntAPPRIS P1 BASIC4.57□□□□□ -1.68
Chmp6P0C0A3 Trappc13-205ENSMUST00000144060 3538 ntAPPRIS ALT1 TSL 1 (best) BASIC4.57□□□□□ -1.68
Chmp6P0C0A3 Olfr970-203ENSMUST00000215922 1739 ntAPPRIS P1 TSL 3 BASIC4.57□□□□□ -1.68
Chmp6P0C0A3 Vmn2r89-202ENSMUST00000159734 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC4.57□□□□□ -1.68
Chmp6P0C0A3 Vmn1r46-202ENSMUST00000205088 10770 ntAPPRIS P1 TSL 2 BASIC4.57□□□□□ -1.68
Chmp6P0C0A3 Nebl-202ENSMUST00000124270 8079 ntTSL 5 BASIC4.57□□□□□ -1.68
Chmp6P0C0A3 Olfr178-203ENSMUST00000215032 2103 ntAPPRIS P1 TSL 5 BASIC4.57□□□□□ -1.68
Chmp6P0C0A3 D130004A15Rik-201ENSMUST00000201492 1577 ntBASIC4.57□□□□□ -1.68
Chmp6P0C0A3 Cfh-203ENSMUST00000111977 4100 ntAPPRIS ALT2 TSL 1 (best) BASIC4.57□□□□□ -1.68
Chmp6P0C0A3 Gm10997-201ENSMUST00000210294 1500 ntBASIC4.56□□□□□ -1.68
Chmp6P0C0A3 Themis-202ENSMUST00000060409 2278 ntAPPRIS ALT2 TSL 1 (best) BASIC4.56□□□□□ -1.68
Chmp6P0C0A3 Olfr716-207ENSMUST00000216871 4062 ntAPPRIS P1 TSL 5 BASIC4.56□□□□□ -1.68
Retrieved 100 of 76,532 protein–RNA pairs in 74.4 ms