Protein–RNA interactions for Protein: P09027

Hoxd3, Homeobox protein Hox-D3, mousemouse

Predictions only

Length 433 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxd3P09027 Gm8761-201ENSMUST00000121507 955 ntBASIC5.13□□□□□ -1.59
Hoxd3P09027 Gm12451-201ENSMUST00000121636 633 ntBASIC5.13□□□□□ -1.59
Hoxd3P09027 Gm13669-201ENSMUST00000122366 457 ntBASIC5.13□□□□□ -1.59
Hoxd3P09027 Gm25106-201ENSMUST00000122672 134 ntBASIC5.13□□□□□ -1.59
Hoxd3P09027 Gm13598-201ENSMUST00000147939 625 ntTSL 5 BASIC5.13□□□□□ -1.59
Hoxd3P09027 Gm12963-203ENSMUST00000156271 388 ntTSL 5 BASIC5.13□□□□□ -1.59
Hoxd3P09027 Gm23167-201ENSMUST00000157155 103 ntBASIC5.13□□□□□ -1.59
Hoxd3P09027 Gm23031-201ENSMUST00000157998 119 ntBASIC5.13□□□□□ -1.59
Hoxd3P09027 Tmbim6-203ENSMUST00000159531 939 ntAPPRIS P1 TSL 5 BASIC5.13□□□□□ -1.59
Hoxd3P09027 Gm6133-201ENSMUST00000164064 948 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
Hoxd3P09027 Gm25675-201ENSMUST00000174979 118 ntBASIC5.13□□□□□ -1.59
Hoxd3P09027 Gm23968-201ENSMUST00000175047 125 ntBASIC5.13□□□□□ -1.59
Hoxd3P09027 Gm26928-201ENSMUST00000182674 572 ntBASIC5.13□□□□□ -1.59
Hoxd3P09027 Gm29012-201ENSMUST00000187882 469 ntTSL 3 BASIC5.13□□□□□ -1.59
Hoxd3P09027 Tmem167-ps2-201ENSMUST00000190251 214 ntBASIC5.13□□□□□ -1.59
Hoxd3P09027 Gm31925-202ENSMUST00000194266 537 ntTSL 5 BASIC5.13□□□□□ -1.59
Hoxd3P09027 Gm18384-201ENSMUST00000195974 808 ntBASIC5.13□□□□□ -1.59
Hoxd3P09027 Spam1-203ENSMUST00000202569 2107 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
Hoxd3P09027 Olfr278-ps1-201ENSMUST00000205676 238 ntBASIC5.13□□□□□ -1.59
Hoxd3P09027 Gm44609-201ENSMUST00000207157 460 ntBASIC5.13□□□□□ -1.59
Hoxd3P09027 Gm8745-201ENSMUST00000207846 782 ntBASIC5.13□□□□□ -1.59
Hoxd3P09027 Mir670hg-207ENSMUST00000211619 819 ntTSL 5 BASIC5.13□□□□□ -1.59
Hoxd3P09027 Gm45704-201ENSMUST00000212582 403 ntBASIC5.13□□□□□ -1.59
Hoxd3P09027 1700054O05Rik-201ENSMUST00000214107 555 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
Hoxd3P09027 AC160124.1-201ENSMUST00000215539 519 ntTSL 2 BASIC5.13□□□□□ -1.59
Hoxd3P09027 AC122327.2-201ENSMUST00000220883 120 ntBASIC5.13□□□□□ -1.59
Hoxd3P09027 AC122327.3-201ENSMUST00000221852 120 ntBASIC5.13□□□□□ -1.59
Hoxd3P09027 CT009718.4-201ENSMUST00000221881 109 ntBASIC5.13□□□□□ -1.59
Hoxd3P09027 AC166341.1-201ENSMUST00000223360 105 ntBASIC5.13□□□□□ -1.59
Hoxd3P09027 CT009754.1-201ENSMUST00000223489 558 ntTSL 3 BASIC5.13□□□□□ -1.59
Hoxd3P09027 Prss23os-201ENSMUST00000032858 334 ntTSL 2 BASIC5.13□□□□□ -1.59
Hoxd3P09027 Gm22293-201ENSMUST00000083314 109 ntBASIC5.13□□□□□ -1.59
Hoxd3P09027 Gm26164-201ENSMUST00000083793 104 ntBASIC5.13□□□□□ -1.59
Hoxd3P09027 Olfr1249-201ENSMUST00000099769 957 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
Hoxd3P09027 Olfr106-ps-202ENSMUST00000214704 1791 ntAPPRIS P1 TSL 5 BASIC5.13□□□□□ -1.59
Hoxd3P09027 Ttc33-201ENSMUST00000022751 1832 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
Hoxd3P09027 AC155167.2-201ENSMUST00000226127 1945 ntBASIC5.13□□□□□ -1.59
Hoxd3P09027 Nlrp1c-ps-201ENSMUST00000171546 3457 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
Hoxd3P09027 Vwde-201ENSMUST00000054530 3979 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
Hoxd3P09027 Olfr1155-203ENSMUST00000215903 2122 ntAPPRIS P1 TSL 5 BASIC5.12□□□□□ -1.59
Hoxd3P09027 Gramd2-203ENSMUST00000128944 3705 ntAPPRIS ALT2 TSL 1 (best) BASIC5.12□□□□□ -1.59
Hoxd3P09027 Aass-201ENSMUST00000031707 3701 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
Hoxd3P09027 Gm43335-201ENSMUST00000198299 3276 ntBASIC5.12□□□□□ -1.59
Hoxd3P09027 Pgbd1-201ENSMUST00000099719 3283 ntAPPRIS P4 TSL 1 (best) BASIC5.12□□□□□ -1.59
Hoxd3P09027 Casp8ap2-205ENSMUST00000178925 6557 ntAPPRIS P2 TSL 5 BASIC5.12□□□□□ -1.59
Hoxd3P09027 Etnppl-201ENSMUST00000072271 4468 ntAPPRIS P2 TSL 1 (best) BASIC5.12□□□□□ -1.59
Hoxd3P09027 Gm10845-202ENSMUST00000228217 3389 ntBASIC5.12□□□□□ -1.59
Hoxd3P09027 Gm37249-201ENSMUST00000195185 2869 ntBASIC5.12□□□□□ -1.59
Hoxd3P09027 Vmn1r84-202ENSMUST00000226408 2898 ntAPPRIS ALT2 BASIC5.12□□□□□ -1.59
Hoxd3P09027 Vmn1r84-204ENSMUST00000227427 2880 ntAPPRIS ALT2 BASIC5.12□□□□□ -1.59
Hoxd3P09027 Gm43088-201ENSMUST00000197530 2347 ntBASIC5.12□□□□□ -1.59
Hoxd3P09027 Zgrf1-201ENSMUST00000043108 7046 ntAPPRIS P1 TSL 5 BASIC5.12□□□□□ -1.59
Hoxd3P09027 Pde1c-206ENSMUST00000166890 4728 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
Hoxd3P09027 Nr3c2-201ENSMUST00000034031 2955 ntAPPRIS ALT2 TSL 5 BASIC5.12□□□□□ -1.59
Hoxd3P09027 Zfp473-204ENSMUST00000120798 3559 ntAPPRIS ALT2 TSL 1 (best) BASIC5.12□□□□□ -1.59
Hoxd3P09027 Myt1l-202ENSMUST00000049784 7202 ntAPPRIS P4 TSL 1 (best) BASIC5.12□□□□□ -1.59
Hoxd3P09027 AC126549.1-201ENSMUST00000225044 3687 ntBASIC5.12□□□□□ -1.59
Hoxd3P09027 Gm45949-201ENSMUST00000221550 1895 ntTSL 5 BASIC5.12□□□□□ -1.59
Hoxd3P09027 Fam35a-206ENSMUST00000228626 3100 ntBASIC5.12□□□□□ -1.59
Hoxd3P09027 Gm14622-201ENSMUST00000117117 468 ntBASIC5.12□□□□□ -1.59
Hoxd3P09027 Gm14115-201ENSMUST00000119242 482 ntBASIC5.12□□□□□ -1.59
Hoxd3P09027 Gm11830-201ENSMUST00000120175 561 ntBASIC5.12□□□□□ -1.59
Hoxd3P09027 Gm13973-201ENSMUST00000121371 894 ntBASIC5.12□□□□□ -1.59
Hoxd3P09027 Gm11925-201ENSMUST00000121375 535 ntBASIC5.12□□□□□ -1.59
Hoxd3P09027 Rps19-ps14-201ENSMUST00000121832 269 ntBASIC5.12□□□□□ -1.59
Hoxd3P09027 Gm13007-201ENSMUST00000121866 365 ntBASIC5.12□□□□□ -1.59
Hoxd3P09027 Gm3810-201ENSMUST00000122413 476 ntBASIC5.12□□□□□ -1.59
Hoxd3P09027 Gm11734-201ENSMUST00000132261 728 ntTSL 3 BASIC5.12□□□□□ -1.59
Hoxd3P09027 Gm16062-201ENSMUST00000151825 771 ntTSL 2 BASIC5.12□□□□□ -1.59
Hoxd3P09027 Gm24781-201ENSMUST00000157636 117 ntBASIC5.12□□□□□ -1.59
Hoxd3P09027 Gm24240-201ENSMUST00000157785 135 ntBASIC5.12□□□□□ -1.59
Hoxd3P09027 Vmn1r-ps32-201ENSMUST00000174389 956 ntBASIC5.12□□□□□ -1.59
Hoxd3P09027 Gm20691-201ENSMUST00000176889 333 ntBASIC5.12□□□□□ -1.59
Hoxd3P09027 1700022E09Rik-201ENSMUST00000185295 299 ntTSL 5 BASIC5.12□□□□□ -1.59
Hoxd3P09027 Gm6075-201ENSMUST00000186816 486 ntBASIC5.12□□□□□ -1.59
Hoxd3P09027 Gm19498-201ENSMUST00000191128 331 ntBASIC5.12□□□□□ -1.59
Hoxd3P09027 Gm29508-202ENSMUST00000191414 710 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
Hoxd3P09027 Gm29665-201ENSMUST00000191457 528 ntBASIC5.12□□□□□ -1.59
Hoxd3P09027 Gm37966-201ENSMUST00000193122 326 ntBASIC5.12□□□□□ -1.59
Hoxd3P09027 4930590H14Rik-201ENSMUST00000193999 551 ntBASIC5.12□□□□□ -1.59
Hoxd3P09027 Gm36382-201ENSMUST00000198892 541 ntBASIC5.12□□□□□ -1.59
Hoxd3P09027 Gm29793-201ENSMUST00000202874 460 ntBASIC5.12□□□□□ -1.59
Hoxd3P09027 Gm44788-201ENSMUST00000207605 385 ntTSL 5 BASIC5.12□□□□□ -1.59
Hoxd3P09027 Gm35190-201ENSMUST00000222335 526 ntTSL 3 BASIC5.12□□□□□ -1.59
Hoxd3P09027 AC140288.1-201ENSMUST00000226329 503 ntBASIC5.12□□□□□ -1.59
Hoxd3P09027 AC168062.1-201ENSMUST00000228048 769 ntBASIC5.12□□□□□ -1.59
Hoxd3P09027 Gstk1-201ENSMUST00000031897 930 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
Hoxd3P09027 Ctag2-201ENSMUST00000033524 854 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
Hoxd3P09027 Gm5341-201ENSMUST00000058881 489 ntBASIC5.12□□□□□ -1.59
Hoxd3P09027 Gm10038-201ENSMUST00000077233 441 ntBASIC5.12□□□□□ -1.59
Hoxd3P09027 Olfr376-201ENSMUST00000078952 1210 ntAPPRIS ALT2 TSL 2 BASIC5.12□□□□□ -1.59
Hoxd3P09027 Gm22053-201ENSMUST00000083394 200 ntBASIC5.12□□□□□ -1.59
Hoxd3P09027 Gm5416-201ENSMUST00000089628 294 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
Hoxd3P09027 Smim15-201ENSMUST00000095458 1918 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
Hoxd3P09027 Mtus1-205ENSMUST00000118835 6426 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
Hoxd3P09027 Rab3c-201ENSMUST00000167824 8444 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
Hoxd3P09027 Olfr633-202ENSMUST00000216006 3915 ntAPPRIS P1 TSL 5 BASIC5.12□□□□□ -1.59
Hoxd3P09027 Olfr1143-203ENSMUST00000111568 1970 ntAPPRIS P1 TSL 5 BASIC5.12□□□□□ -1.59
Hoxd3P09027 Xpnpep3-203ENSMUST00000163754 5383 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
Hoxd3P09027 Slc22a28-201ENSMUST00000065651 2004 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
Retrieved 100 of 76,532 protein–RNA pairs in 83.8 ms