Protein–RNA interactions for Protein: O55187

Cbx4, E3 SUMO-protein ligase CBX4, mousemouse

Predictions only

Length 551 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cbx4O55187 Gm12734-201ENSMUST00000120228 948 ntBASIC4.63□□□□□ -1.67
Cbx4O55187 Gm14600-201ENSMUST00000121032 630 ntBASIC4.63□□□□□ -1.67
Cbx4O55187 Gm23792-201ENSMUST00000122557 93 ntBASIC4.63□□□□□ -1.67
Cbx4O55187 Gm25103-201ENSMUST00000122671 318 ntBASIC4.63□□□□□ -1.67
Cbx4O55187 Gm13174-201ENSMUST00000126141 220 ntTSL 3 BASIC4.63□□□□□ -1.67
Cbx4O55187 Gm15878-201ENSMUST00000127561 306 ntBASIC4.63□□□□□ -1.67
Cbx4O55187 1700080G11Rik-201ENSMUST00000156401 436 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
Cbx4O55187 Gm23034-201ENSMUST00000158001 147 ntBASIC4.63□□□□□ -1.67
Cbx4O55187 R3hcc1l-202ENSMUST00000160107 950 ntAPPRIS ALT2 TSL 2 BASIC4.63□□□□□ -1.67
Cbx4O55187 Gm17732-201ENSMUST00000163259 821 ntAPPRIS P1 BASIC4.63□□□□□ -1.67
Cbx4O55187 Vmn2r-ps74-201ENSMUST00000174705 917 ntBASIC4.63□□□□□ -1.67
Cbx4O55187 Mir5112-201ENSMUST00000174897 60 ntBASIC4.63□□□□□ -1.67
Cbx4O55187 Gm22917-201ENSMUST00000180116 110 ntBASIC4.63□□□□□ -1.67
Cbx4O55187 1700057G04Rik-206ENSMUST00000185580 842 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
Cbx4O55187 Gm19206-201ENSMUST00000186401 827 ntBASIC4.63□□□□□ -1.67
Cbx4O55187 Gm28426-201ENSMUST00000187385 620 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
Cbx4O55187 1700022E09Rik-202ENSMUST00000188342 387 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
Cbx4O55187 Cycs-ps2-201ENSMUST00000197114 292 ntBASIC4.63□□□□□ -1.67
Cbx4O55187 Gm43524-201ENSMUST00000197278 298 ntBASIC4.63□□□□□ -1.67
Cbx4O55187 Gm43018-201ENSMUST00000198075 1275 ntBASIC4.63□□□□□ -1.67
Cbx4O55187 AC153729.2-201ENSMUST00000215166 560 ntTSL 3 BASIC4.63□□□□□ -1.67
Cbx4O55187 Gm18487-201ENSMUST00000215826 878 ntBASIC4.63□□□□□ -1.67
Cbx4O55187 AC139638.1-201ENSMUST00000218027 364 ntBASIC4.63□□□□□ -1.67
Cbx4O55187 AC153870.1-201ENSMUST00000219599 560 ntBASIC4.63□□□□□ -1.67
Cbx4O55187 Gstz1-204ENSMUST00000222222 724 ntAPPRIS ALT1 TSL 2 BASIC4.63□□□□□ -1.67
Cbx4O55187 Vmn1r36-202ENSMUST00000226635 918 ntAPPRIS P2 BASIC4.63□□□□□ -1.67
Cbx4O55187 AC137902.2-201ENSMUST00000227989 576 ntBASIC4.63□□□□□ -1.67
Cbx4O55187 Defb1-201ENSMUST00000051017 872 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
Cbx4O55187 Olfr1461-201ENSMUST00000053772 939 ntAPPRIS P1 BASIC4.63□□□□□ -1.67
Cbx4O55187 D130040H23Rik-201ENSMUST00000078257 1218 ntTSL 2 BASIC4.63□□□□□ -1.67
Cbx4O55187 Gm3563-201ENSMUST00000172963 1628 ntBASIC4.63□□□□□ -1.67
Cbx4O55187 Rgsl1-201ENSMUST00000124558 3642 ntAPPRIS P1 TSL 5 BASIC4.63□□□□□ -1.67
Cbx4O55187 Olfr197-202ENSMUST00000207772 1320 ntAPPRIS P1 TSL 5 BASIC4.63□□□□□ -1.67
Cbx4O55187 Fgf7-201ENSMUST00000064794 2672 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
Cbx4O55187 Gm31747-201ENSMUST00000204638 3086 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
Cbx4O55187 Arpp19-203ENSMUST00000166549 1747 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
Cbx4O55187 Olfr1331-203ENSMUST00000216589 3139 ntAPPRIS ALT2 TSL 5 BASIC4.63□□□□□ -1.67
Cbx4O55187 Cep290-201ENSMUST00000164751 8006 ntAPPRIS P1 TSL 5 BASIC4.63□□□□□ -1.67
Cbx4O55187 Fbxw15-201ENSMUST00000056745 1495 ntAPPRIS P2 TSL 1 (best) BASIC4.62□□□□□ -1.67
Cbx4O55187 Pign-205ENSMUST00000186485 6759 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
Cbx4O55187 Spp1-204ENSMUST00000112747 1507 ntAPPRIS P3 TSL 1 (best) BASIC4.62□□□□□ -1.67
Cbx4O55187 AC162938.2-205ENSMUST00000217551 2828 ntBASIC4.62□□□□□ -1.67
Cbx4O55187 Sult1d1-201ENSMUST00000113314 2420 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
Cbx4O55187 Zfp935-201ENSMUST00000076195 1631 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
Cbx4O55187 A630010A05Rik-201ENSMUST00000100165 684 ntAPPRIS ALT2 TSL 5 BASIC4.62□□□□□ -1.67
Cbx4O55187 Trac-201ENSMUST00000103740 413 ntAPPRIS P1 BASIC4.62□□□□□ -1.67
Cbx4O55187 Gm23746-201ENSMUST00000104229 125 ntBASIC4.62□□□□□ -1.67
Cbx4O55187 Gm15560-201ENSMUST00000117107 643 ntBASIC4.62□□□□□ -1.67
Cbx4O55187 Gm11366-201ENSMUST00000119279 429 ntBASIC4.62□□□□□ -1.67
Cbx4O55187 Pdcl2-202ENSMUST00000122213 1049 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
Cbx4O55187 Gm16189-201ENSMUST00000123707 997 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
Cbx4O55187 Gm14135-201ENSMUST00000135438 591 ntTSL 3 BASIC4.62□□□□□ -1.67
Cbx4O55187 Cyp3a25-202ENSMUST00000138870 513 ntTSL 3 BASIC4.62□□□□□ -1.67
Cbx4O55187 Crem-219ENSMUST00000140332 1015 ntTSL 5 BASIC4.62□□□□□ -1.67
Cbx4O55187 Gm11665-201ENSMUST00000148136 285 ntTSL 5 BASIC4.62□□□□□ -1.67
Cbx4O55187 4930503B20Rik-203ENSMUST00000149825 970 ntAPPRIS ALT2 TSL 1 (best) BASIC4.62□□□□□ -1.67
Cbx4O55187 Gm22819-201ENSMUST00000157445 303 ntBASIC4.62□□□□□ -1.67
Cbx4O55187 Gm25655-201ENSMUST00000158465 290 ntBASIC4.62□□□□□ -1.67
Cbx4O55187 Gm6619-201ENSMUST00000159229 608 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
Cbx4O55187 5430401F13Rik-202ENSMUST00000161385 608 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
Cbx4O55187 Gm3531-201ENSMUST00000162698 489 ntBASIC4.62□□□□□ -1.67
Cbx4O55187 Gm17377-201ENSMUST00000165184 207 ntBASIC4.62□□□□□ -1.67
Cbx4O55187 Gm9587-201ENSMUST00000172449 454 ntBASIC4.62□□□□□ -1.67
Cbx4O55187 Vmn1r-ps25-201ENSMUST00000173545 799 ntBASIC4.62□□□□□ -1.67
Cbx4O55187 Mir7056-201ENSMUST00000183776 59 ntBASIC4.62□□□□□ -1.67
Cbx4O55187 2900009J06Rik-201ENSMUST00000185310 498 ntTSL 2 BASIC4.62□□□□□ -1.67
Cbx4O55187 Gm18406-201ENSMUST00000185872 669 ntBASIC4.62□□□□□ -1.67
Cbx4O55187 2610001A08Rik-201ENSMUST00000193315 867 ntBASIC4.62□□□□□ -1.67
Cbx4O55187 Gm37359-201ENSMUST00000195243 526 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
Cbx4O55187 Gm37291-201ENSMUST00000195637 533 ntTSL 5 BASIC4.62□□□□□ -1.67
Cbx4O55187 Gbp2-ps-201ENSMUST00000198870 1269 ntBASIC4.62□□□□□ -1.67
Cbx4O55187 Gm43732-201ENSMUST00000200260 511 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
Cbx4O55187 Gm30717-201ENSMUST00000206549 494 ntTSL 5 BASIC4.62□□□□□ -1.67
Cbx4O55187 Gm44779-201ENSMUST00000206937 708 ntBASIC4.62□□□□□ -1.67
Cbx4O55187 4930402F11Rik-202ENSMUST00000207781 1178 ntTSL 5 BASIC4.62□□□□□ -1.67
Cbx4O55187 Gm32916-203ENSMUST00000208033 789 ntTSL 5 BASIC4.62□□□□□ -1.67
Cbx4O55187 Bc1-ps1-201ENSMUST00000208471 318 ntBASIC4.62□□□□□ -1.67
Cbx4O55187 Olfr850-202ENSMUST00000211832 947 ntAPPRIS ALT2 BASIC4.62□□□□□ -1.67
Cbx4O55187 Gm39363-201ENSMUST00000214251 723 ntTSL 3 BASIC4.62□□□□□ -1.67
Cbx4O55187 AC152979.4-201ENSMUST00000219893 379 ntBASIC4.62□□□□□ -1.67
Cbx4O55187 AC168059.2-201ENSMUST00000224473 333 ntBASIC4.62□□□□□ -1.67
Cbx4O55187 Crem-202ENSMUST00000049942 953 ntTSL 2 BASIC4.62□□□□□ -1.67
Cbx4O55187 Vmn1r12-201ENSMUST00000073384 924 ntAPPRIS P2 BASIC4.62□□□□□ -1.67
Cbx4O55187 5430401F13Rik-201ENSMUST00000075020 602 ntAPPRIS P1 TSL 5 BASIC4.62□□□□□ -1.67
Cbx4O55187 Olfr482-201ENSMUST00000081184 972 ntAPPRIS P1 BASIC4.62□□□□□ -1.67
Cbx4O55187 Gm25403-201ENSMUST00000082971 143 ntBASIC4.62□□□□□ -1.67
Cbx4O55187 Gm25140-201ENSMUST00000083254 140 ntBASIC4.62□□□□□ -1.67
Cbx4O55187 Mir325-201ENSMUST00000083491 98 ntBASIC4.62□□□□□ -1.67
Cbx4O55187 Olfr1256-201ENSMUST00000099763 921 ntAPPRIS P1 BASIC4.62□□□□□ -1.67
Cbx4O55187 Olfr1066-201ENSMUST00000099885 942 ntAPPRIS P1 BASIC4.62□□□□□ -1.67
Cbx4O55187 Ralgapa1-211ENSMUST00000220367 7473 ntAPPRIS ALT2 TSL 5 BASIC4.62□□□□□ -1.67
Cbx4O55187 AC120153.1-201ENSMUST00000226502 1311 ntBASIC4.62□□□□□ -1.67
Cbx4O55187 Gm18954-201ENSMUST00000222200 1792 ntBASIC4.62□□□□□ -1.67
Cbx4O55187 Gm37205-201ENSMUST00000194820 2736 ntBASIC4.62□□□□□ -1.67
Cbx4O55187 Zfp808-204ENSMUST00000221772 1379 ntTSL 5 BASIC4.62□□□□□ -1.67
Cbx4O55187 Gm19619-201ENSMUST00000200707 3201 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
Cbx4O55187 D030025E07Rik-203ENSMUST00000197413 2346 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
Cbx4O55187 A230072E10Rik-202ENSMUST00000175825 3292 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
Cbx4O55187 Mmp12-203ENSMUST00000120655 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC4.62□□□□□ -1.67
Cbx4O55187 Olfr669-202ENSMUST00000210138 2195 ntAPPRIS P1 TSL 3 BASIC4.61□□□□□ -1.67
Retrieved 100 of 76,532 protein–RNA pairs in 125.3 ms