Protein–RNA interactions for Protein: O54879

Hmgb3, High mobility group protein B3, mousemouse

Known RBP Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb3O54879 Gm20614-201ENSMUST00000177106 632 ntBASIC3.32□□□□□ -1.88
Hmgb3O54879 Mir6973b-201ENSMUST00000184185 80 ntBASIC3.32□□□□□ -1.88
Hmgb3O54879 Gm27286-201ENSMUST00000184934 179 ntBASIC3.32□□□□□ -1.88
Hmgb3O54879 1700060O08Rik-201ENSMUST00000185390 281 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
Hmgb3O54879 Gm28596-201ENSMUST00000185870 696 ntBASIC3.32□□□□□ -1.88
Hmgb3O54879 Gm21856-201ENSMUST00000187547 696 ntBASIC3.32□□□□□ -1.88
Hmgb3O54879 Scgb2b28-ps-201ENSMUST00000188974 337 ntBASIC3.32□□□□□ -1.88
Hmgb3O54879 Scgb2b32-ps-201ENSMUST00000190326 337 ntBASIC3.32□□□□□ -1.88
Hmgb3O54879 Gm29538-201ENSMUST00000190783 471 ntTSL 2 BASIC3.32□□□□□ -1.88
Hmgb3O54879 Gm19214-201ENSMUST00000191956 1083 ntBASIC3.32□□□□□ -1.88
Hmgb3O54879 Gm32295-201ENSMUST00000192558 696 ntBASIC3.32□□□□□ -1.88
Hmgb3O54879 2610001A08Rik-201ENSMUST00000193315 867 ntBASIC3.32□□□□□ -1.88
Hmgb3O54879 Gm31260-201ENSMUST00000193478 696 ntBASIC3.32□□□□□ -1.88
Hmgb3O54879 Gm37710-201ENSMUST00000193501 1274 ntBASIC3.32□□□□□ -1.88
Hmgb3O54879 Gm30097-201ENSMUST00000193581 447 ntTSL 5 BASIC3.32□□□□□ -1.88
Hmgb3O54879 Gm38332-201ENSMUST00000194189 147 ntBASIC3.32□□□□□ -1.88
Hmgb3O54879 Gm35702-201ENSMUST00000198653 511 ntBASIC3.32□□□□□ -1.88
Hmgb3O54879 Gm7041-201ENSMUST00000201227 524 ntBASIC3.32□□□□□ -1.88
Hmgb3O54879 Gm38832-201ENSMUST00000205674 400 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
Hmgb3O54879 Gm7128-201ENSMUST00000211639 533 ntBASIC3.32□□□□□ -1.88
Hmgb3O54879 Olfr1119-ps1-201ENSMUST00000215282 634 ntBASIC3.32□□□□□ -1.88
Hmgb3O54879 AC153961.2-201ENSMUST00000218877 164 ntBASIC3.32□□□□□ -1.88
Hmgb3O54879 Gm18409-202ENSMUST00000220105 529 ntBASIC3.32□□□□□ -1.88
Hmgb3O54879 AC154709.1-201ENSMUST00000222304 446 ntTSL 3 BASIC3.32□□□□□ -1.88
Hmgb3O54879 AC129219.3-201ENSMUST00000223790 196 ntBASIC3.32□□□□□ -1.88
Hmgb3O54879 AC119573.1-201ENSMUST00000227960 757 ntBASIC3.32□□□□□ -1.88
Hmgb3O54879 Pbsn-201ENSMUST00000000003 902 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
Hmgb3O54879 Bcl2a1a-201ENSMUST00000098485 819 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
Hmgb3O54879 Gm14399-201ENSMUST00000099029 192 ntTSL 5 BASIC3.32□□□□□ -1.88
Hmgb3O54879 Mmp1b-201ENSMUST00000047888 1449 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
Hmgb3O54879 Olfr1370-204ENSMUST00000215806 4322 ntAPPRIS P1 TSL 5 BASIC3.32□□□□□ -1.88
Hmgb3O54879 Gm3616-201ENSMUST00000174430 2514 ntBASIC3.32□□□□□ -1.88
Hmgb3O54879 Fam19a1-202ENSMUST00000122120 3252 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
Hmgb3O54879 Vmn2r-ps49-201ENSMUST00000173160 3551 ntBASIC3.31□□□□□ -1.88
Hmgb3O54879 Gm13762-201ENSMUST00000144908 2612 ntAPPRIS P1 TSL 3 BASIC3.31□□□□□ -1.88
Hmgb3O54879 Gm5724-201ENSMUST00000148411 2449 ntAPPRIS P1 TSL 5 BASIC3.31□□□□□ -1.88
Hmgb3O54879 Slc22a28-201ENSMUST00000065651 2004 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
Hmgb3O54879 AC134596.1-201ENSMUST00000222016 1922 ntBASIC3.31□□□□□ -1.88
Hmgb3O54879 Oog3-201ENSMUST00000050933 1865 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
Hmgb3O54879 AC153563.1-202ENSMUST00000217695 1838 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
Hmgb3O54879 Olfr1226-202ENSMUST00000214709 5270 ntAPPRIS P1 TSL 3 BASIC3.31□□□□□ -1.88
Hmgb3O54879 Gm43376-202ENSMUST00000199747 1743 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
Hmgb3O54879 Olfr131-202ENSMUST00000172933 1358 ntAPPRIS P1 TSL 3 BASIC3.31□□□□□ -1.88
Hmgb3O54879 Gm33594-201ENSMUST00000209502 1333 ntTSL 5 BASIC3.31□□□□□ -1.88
Hmgb3O54879 Gm23594-201ENSMUST00000104307 134 ntBASIC3.31□□□□□ -1.88
Hmgb3O54879 Gm12887-201ENSMUST00000106265 360 ntAPPRIS P1 TSL 5 BASIC3.31□□□□□ -1.88
Hmgb3O54879 Gm15752-201ENSMUST00000117427 394 ntBASIC3.31□□□□□ -1.88
Hmgb3O54879 Mup-ps16-201ENSMUST00000120085 596 ntBASIC3.31□□□□□ -1.88
Hmgb3O54879 Gm13865-201ENSMUST00000120957 865 ntBASIC3.31□□□□□ -1.88
Hmgb3O54879 Gm5379-201ENSMUST00000120973 826 ntBASIC3.31□□□□□ -1.88
Hmgb3O54879 Gm11350-201ENSMUST00000121436 870 ntBASIC3.31□□□□□ -1.88
Hmgb3O54879 Gm11274-201ENSMUST00000146857 481 ntTSL 2 BASIC3.31□□□□□ -1.88
Hmgb3O54879 Gm16084-201ENSMUST00000148122 620 ntTSL 3 BASIC3.31□□□□□ -1.88
Hmgb3O54879 Gm24239-201ENSMUST00000157791 255 ntBASIC3.31□□□□□ -1.88
Hmgb3O54879 Gm24188-201ENSMUST00000157980 108 ntBASIC3.31□□□□□ -1.88
Hmgb3O54879 Vmn1r170-201ENSMUST00000170166 915 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
Hmgb3O54879 Gm20647-201ENSMUST00000176396 857 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
Hmgb3O54879 Gm7656-201ENSMUST00000182468 1004 ntBASIC3.31□□□□□ -1.88
Hmgb3O54879 Gm27690-201ENSMUST00000184596 126 ntBASIC3.31□□□□□ -1.88
Hmgb3O54879 Gm17981-201ENSMUST00000191109 739 ntBASIC3.31□□□□□ -1.88
Hmgb3O54879 Gm18036-201ENSMUST00000195256 272 ntBASIC3.31□□□□□ -1.88
Hmgb3O54879 Gm4410-201ENSMUST00000199349 686 ntBASIC3.31□□□□□ -1.88
Hmgb3O54879 Tgif1-ps-201ENSMUST00000201864 736 ntBASIC3.31□□□□□ -1.88
Hmgb3O54879 Gm44003-201ENSMUST00000203024 490 ntBASIC3.31□□□□□ -1.88
Hmgb3O54879 Gm19726-201ENSMUST00000205008 240 ntBASIC3.31□□□□□ -1.88
Hmgb3O54879 Gm44995-201ENSMUST00000207056 504 ntTSL 3 BASIC3.31□□□□□ -1.88
Hmgb3O54879 4930598N05Rik-204ENSMUST00000207733 675 ntTSL 3 BASIC3.31□□□□□ -1.88
Hmgb3O54879 Bc1-ps1-201ENSMUST00000208471 318 ntBASIC3.31□□□□□ -1.88
Hmgb3O54879 5430402P08Rik-201ENSMUST00000211799 1143 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
Hmgb3O54879 Olfr854-202ENSMUST00000212872 939 ntAPPRIS ALT2 BASIC3.31□□□□□ -1.88
Hmgb3O54879 AC131677.1-201ENSMUST00000218721 535 ntBASIC3.31□□□□□ -1.88
Hmgb3O54879 AC162934.1-201ENSMUST00000222880 309 ntBASIC3.31□□□□□ -1.88
Hmgb3O54879 Gm34215-202ENSMUST00000223024 492 ntTSL 5 BASIC3.31□□□□□ -1.88
Hmgb3O54879 AC141884.1-201ENSMUST00000226327 636 ntBASIC3.31□□□□□ -1.88
Hmgb3O54879 Dapl1-201ENSMUST00000028369 573 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
Hmgb3O54879 Olfr218-201ENSMUST00000057548 942 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
Hmgb3O54879 n-R5s162-201ENSMUST00000082581 119 ntBASIC3.31□□□□□ -1.88
Hmgb3O54879 Gm4788-203ENSMUST00000111989 3187 ntAPPRIS P2 TSL 1 (best) BASIC3.31□□□□□ -1.88
Hmgb3O54879 Gm37006-201ENSMUST00000195253 2674 ntBASIC3.31□□□□□ -1.88
Hmgb3O54879 Gm43197-201ENSMUST00000201493 2583 ntBASIC3.31□□□□□ -1.88
Hmgb3O54879 Gm37045-201ENSMUST00000192016 2463 ntBASIC3.31□□□□□ -1.88
Hmgb3O54879 Gm26853-201ENSMUST00000180757 4010 ntTSL 5 BASIC3.31□□□□□ -1.88
Hmgb3O54879 Enam-202ENSMUST00000199104 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC3.3□□□□□ -1.88
Hmgb3O54879 Olfr1037-202ENSMUST00000213333 1610 ntAPPRIS P1 TSL 5 BASIC3.3□□□□□ -1.88
Hmgb3O54879 AC123035.1-201ENSMUST00000213846 2671 ntTSL 5 BASIC3.3□□□□□ -1.88
Hmgb3O54879 Casp12-201ENSMUST00000027009 2649 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
Hmgb3O54879 Vmn2r90-201ENSMUST00000169805 2592 ntAPPRIS P1 TSL 5 BASIC3.3□□□□□ -1.88
Hmgb3O54879 4930467E23Rik-201ENSMUST00000098909 2514 ntAPPRIS P1 TSL 5 BASIC3.3□□□□□ -1.88
Hmgb3O54879 Zfp458-201ENSMUST00000045969 3488 ntAPPRIS P2 TSL 1 (best) BASIC3.3□□□□□ -1.88
Hmgb3O54879 Oog1-203ENSMUST00000222332 1464 ntAPPRIS ALT2 TSL 5 BASIC3.3□□□□□ -1.88
Hmgb3O54879 Gnpnat1-206ENSMUST00000227468 1490 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
Hmgb3O54879 Gm37916-201ENSMUST00000192153 2435 ntBASIC3.3□□□□□ -1.88
Hmgb3O54879 Olfr612-202ENSMUST00000214269 2420 ntAPPRIS P1 TSL 5 BASIC3.3□□□□□ -1.88
Hmgb3O54879 4933436I01Rik-201ENSMUST00000026325 1426 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
Hmgb3O54879 Gm12667-201ENSMUST00000118299 1332 ntBASIC3.3□□□□□ -1.88
Hmgb3O54879 Gm25537-201ENSMUST00000103851 109 ntBASIC3.3□□□□□ -1.88
Hmgb3O54879 Gm22473-201ENSMUST00000104114 132 ntBASIC3.3□□□□□ -1.88
Hmgb3O54879 Apool-202ENSMUST00000113415 783 ntAPPRIS ALT2 TSL 5 BASIC3.3□□□□□ -1.88
Hmgb3O54879 Gm15766-201ENSMUST00000118025 813 ntBASIC3.3□□□□□ -1.88
Hmgb3O54879 Gm13788-201ENSMUST00000120767 601 ntBASIC3.3□□□□□ -1.88
Retrieved 100 of 76,532 protein–RNA pairs in 77.2 ms