Protein–RNA interactions for Protein: O35492

Clk3, Dual specificity protein kinase CLK3, mousemouse

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clk3O35492 Gm18358-201ENSMUST00000173179 1277 ntBASIC4.59□□□□□ -1.67
Clk3O35492 Gm15143-201ENSMUST00000178180 714 ntBASIC4.59□□□□□ -1.67
Clk3O35492 Gm4836-201ENSMUST00000179874 907 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
Clk3O35492 Gm10096-202ENSMUST00000180207 907 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
Clk3O35492 Gm10487-202ENSMUST00000180344 907 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
Clk3O35492 Cox6b2-202ENSMUST00000182048 465 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
Clk3O35492 Gm29484-201ENSMUST00000186067 324 ntBASIC4.59□□□□□ -1.67
Clk3O35492 Gm9569-201ENSMUST00000187492 787 ntBASIC4.59□□□□□ -1.67
Clk3O35492 Gm9775-201ENSMUST00000189402 331 ntBASIC4.59□□□□□ -1.67
Clk3O35492 Gm17981-201ENSMUST00000191109 739 ntBASIC4.59□□□□□ -1.67
Clk3O35492 Ccl12-201ENSMUST00000000194 537 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
Clk3O35492 Gm38032-201ENSMUST00000195052 1589 ntBASIC4.59□□□□□ -1.67
Clk3O35492 4921527H02Rik-201ENSMUST00000196028 246 ntBASIC4.59□□□□□ -1.67
Clk3O35492 Gm7646-201ENSMUST00000198590 1346 ntBASIC4.59□□□□□ -1.67
Clk3O35492 Gm7709-201ENSMUST00000199391 1858 ntBASIC4.59□□□□□ -1.67
Clk3O35492 Gm20756-201ENSMUST00000201080 1595 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
Clk3O35492 Minpp1-ps-201ENSMUST00000203344 946 ntBASIC4.59□□□□□ -1.67
Clk3O35492 Gm43968-201ENSMUST00000203388 389 ntBASIC4.59□□□□□ -1.67
Clk3O35492 Wdr49-203ENSMUST00000204341 1344 ntTSL 5 BASIC4.59□□□□□ -1.67
Clk3O35492 Gm44795-201ENSMUST00000205496 319 ntBASIC4.59□□□□□ -1.67
Clk3O35492 Gm44893-201ENSMUST00000207259 443 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
Clk3O35492 Olfr1468-ps1-201ENSMUST00000207287 1208 ntAPPRIS P1 TSL 5 BASIC4.59□□□□□ -1.67
Clk3O35492 Gm45409-201ENSMUST00000211486 252 ntBASIC4.59□□□□□ -1.67
Clk3O35492 Olfr864-ps1-201ENSMUST00000212664 930 ntBASIC4.59□□□□□ -1.67
Clk3O35492 Olfr1000-203ENSMUST00000216571 2028 ntAPPRIS P1 TSL 5 BASIC4.59□□□□□ -1.67
Clk3O35492 AC168274.2-201ENSMUST00000219252 338 ntTSL 5 BASIC4.59□□□□□ -1.67
Clk3O35492 AC139758.1-201ENSMUST00000226573 930 ntBASIC4.59□□□□□ -1.67
Clk3O35492 Zfp62-201ENSMUST00000061757 3852 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
Clk3O35492 Gm10058-201ENSMUST00000079797 893 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
Clk3O35492 n-R5s167-201ENSMUST00000083227 121 ntBASIC4.59□□□□□ -1.67
Clk3O35492 Sult2a2-201ENSMUST00000086148 741 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
Clk3O35492 Mir465-201ENSMUST00000093563 74 ntBASIC4.59□□□□□ -1.67
Clk3O35492 Gm830-201ENSMUST00000142458 3502 ntTSL 1 (best) BASIC4.59□□□□□ -1.68
Clk3O35492 Cd84-205ENSMUST00000155802 3291 ntAPPRIS P3 TSL 1 (best) BASIC4.59□□□□□ -1.68
Clk3O35492 Cep290-201ENSMUST00000164751 8006 ntAPPRIS P1 TSL 5 BASIC4.58□□□□□ -1.68
Clk3O35492 Amy1-201ENSMUST00000067980 1985 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
Clk3O35492 Cd53-201ENSMUST00000038845 1742 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
Clk3O35492 Olfr685-204ENSMUST00000217432 3246 ntAPPRIS ALT2 TSL 5 BASIC4.58□□□□□ -1.68
Clk3O35492 Gm29084-201ENSMUST00000185587 1452 ntBASIC4.58□□□□□ -1.68
Clk3O35492 Gm28242-201ENSMUST00000187274 1492 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
Clk3O35492 Gm6913-201ENSMUST00000100019 348 ntBASIC4.58□□□□□ -1.68
Clk3O35492 Gm14050-201ENSMUST00000117052 346 ntBASIC4.58□□□□□ -1.68
Clk3O35492 Gm14795-201ENSMUST00000118461 471 ntBASIC4.58□□□□□ -1.68
Clk3O35492 Gm3267-201ENSMUST00000118671 473 ntBASIC4.58□□□□□ -1.68
Clk3O35492 Gm11790-201ENSMUST00000119569 455 ntBASIC4.58□□□□□ -1.68
Clk3O35492 Olfr1035-ps1-201ENSMUST00000120109 966 ntBASIC4.58□□□□□ -1.68
Clk3O35492 Gm13435-201ENSMUST00000120111 1023 ntBASIC4.58□□□□□ -1.68
Clk3O35492 Mrpl24-203ENSMUST00000121048 1234 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
Clk3O35492 A230083N12Rik-201ENSMUST00000126646 572 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
Clk3O35492 Gm16345-201ENSMUST00000146065 158 ntBASIC4.58□□□□□ -1.68
Clk3O35492 1700019E08Rik-202ENSMUST00000153567 635 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
Clk3O35492 Gm25906-201ENSMUST00000158489 126 ntBASIC4.58□□□□□ -1.68
Clk3O35492 Gm24768-201ENSMUST00000158512 94 ntBASIC4.58□□□□□ -1.68
Clk3O35492 Gm15974-201ENSMUST00000159103 531 ntBASIC4.58□□□□□ -1.68
Clk3O35492 Gm6619-201ENSMUST00000159229 608 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
Clk3O35492 Gm16094-201ENSMUST00000162784 427 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
Clk3O35492 Trbv10-201ENSMUST00000168322 289 ntBASIC4.58□□□□□ -1.68
Clk3O35492 1700027A15Rik-201ENSMUST00000185768 321 ntTSL 5 BASIC4.58□□□□□ -1.68
Clk3O35492 Gm19206-201ENSMUST00000186401 827 ntBASIC4.58□□□□□ -1.68
Clk3O35492 Gm20915-201ENSMUST00000191575 663 ntBASIC4.58□□□□□ -1.68
Clk3O35492 4930535G08Rik-201ENSMUST00000192017 425 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
Clk3O35492 Ighv3-4-201ENSMUST00000193408 353 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
Clk3O35492 Cycs-ps2-201ENSMUST00000197114 292 ntBASIC4.58□□□□□ -1.68
Clk3O35492 AL645522.1-201ENSMUST00000197692 104 ntBASIC4.58□□□□□ -1.68
Clk3O35492 Gm43100-201ENSMUST00000202985 674 ntTSL 5 BASIC4.58□□□□□ -1.68
Clk3O35492 Gm44006-201ENSMUST00000204273 396 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
Clk3O35492 Gm44648-201ENSMUST00000208267 329 ntBASIC4.58□□□□□ -1.68
Clk3O35492 Gm45636-201ENSMUST00000210497 1064 ntBASIC4.58□□□□□ -1.68
Clk3O35492 Gm46234-201ENSMUST00000218702 259 ntBASIC4.58□□□□□ -1.68
Clk3O35492 AC131720.3-201ENSMUST00000219113 275 ntBASIC4.58□□□□□ -1.68
Clk3O35492 Gm40692-201ENSMUST00000220411 491 ntBASIC4.58□□□□□ -1.68
Clk3O35492 Gm6171-201ENSMUST00000220760 645 ntBASIC4.58□□□□□ -1.68
Clk3O35492 Erich6b-201ENSMUST00000022579 869 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
Clk3O35492 AL607142.1-201ENSMUST00000226560 78 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
Clk3O35492 CT009600.2-201ENSMUST00000226638 481 ntBASIC4.58□□□□□ -1.68
Clk3O35492 Vmn1r214-201ENSMUST00000074252 1227 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
Clk3O35492 5430401F13Rik-201ENSMUST00000075020 602 ntAPPRIS P1 TSL 5 BASIC4.58□□□□□ -1.68
Clk3O35492 D130040H23Rik-201ENSMUST00000078257 1218 ntTSL 2 BASIC4.58□□□□□ -1.68
Clk3O35492 Gm25131-201ENSMUST00000082653 151 ntBASIC4.58□□□□□ -1.68
Clk3O35492 Gm23452-201ENSMUST00000083327 107 ntBASIC4.58□□□□□ -1.68
Clk3O35492 Gm22578-201ENSMUST00000083730 107 ntBASIC4.58□□□□□ -1.68
Clk3O35492 Gm45517-201ENSMUST00000209973 2468 ntBASIC4.58□□□□□ -1.68
Clk3O35492 Ankrd28-204ENSMUST00000227089 3522 ntBASIC4.58□□□□□ -1.68
Clk3O35492 Ceacam3-201ENSMUST00000108491 3261 ntAPPRIS P1 TSL 5 BASIC4.58□□□□□ -1.68
Clk3O35492 Gm43668-201ENSMUST00000197014 5342 ntBASIC4.58□□□□□ -1.68
Clk3O35492 Gm37053-201ENSMUST00000192399 2087 ntBASIC4.58□□□□□ -1.68
Clk3O35492 Gm44109-201ENSMUST00000204514 1954 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
Clk3O35492 Nlrp4f-204ENSMUST00000221659 3551 ntAPPRIS P1 TSL 5 BASIC4.58□□□□□ -1.68
Clk3O35492 Gpr141-201ENSMUST00000065335 3433 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
Clk3O35492 AC139218.1-201ENSMUST00000228215 4287 ntBASIC4.58□□□□□ -1.68
Clk3O35492 Gm44724-201ENSMUST00000207119 5548 ntTSL 5 BASIC4.57□□□□□ -1.68
Clk3O35492 Cyp3a11-201ENSMUST00000035918 2344 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
Clk3O35492 Tcp1-ps1-201ENSMUST00000120941 1466 ntBASIC4.57□□□□□ -1.68
Clk3O35492 AC102431.1-201ENSMUST00000223773 1449 ntBASIC4.57□□□□□ -1.68
Clk3O35492 Cbll1-205ENSMUST00000188326 1399 ntTSL 2 BASIC4.57□□□□□ -1.68
Clk3O35492 Zfp280c-201ENSMUST00000072292 4045 ntAPPRIS ALT2 TSL 1 (best) BASIC4.57□□□□□ -1.68
Clk3O35492 Olfr726-208ENSMUST00000217422 1302 ntAPPRIS P1 TSL 5 BASIC4.57□□□□□ -1.68
Clk3O35492 Gm9611-201ENSMUST00000100698 231 ntAPPRIS P1 TSL 5 BASIC4.57□□□□□ -1.68
Clk3O35492 Gm15110-201ENSMUST00000117545 881 ntBASIC4.57□□□□□ -1.68
Clk3O35492 Gm16100-201ENSMUST00000120489 231 ntBASIC4.57□□□□□ -1.68
Retrieved 100 of 76,532 protein–RNA pairs in 87.3 ms