Protein–RNA interactions for Protein: A2ASI5

Scn3a, Sodium channel protein, mousemouse

Predictions only

Length 1,947 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn3aA2ASI5 Olfr112-205ENSMUST00000213274 3558 ntAPPRIS P1 TSL 5 BASIC4.48□□□□□ -1.69
Scn3aA2ASI5 Cntn3-201ENSMUST00000032159 5183 ntAPPRIS P1 TSL 2 BASIC4.48□□□□□ -1.69
Scn3aA2ASI5 Cmah-202ENSMUST00000110391 9789 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
Scn3aA2ASI5 Gm37195-201ENSMUST00000192006 3018 ntBASIC4.47□□□□□ -1.69
Scn3aA2ASI5 Trdv5-201ENSMUST00000103685 438 ntAPPRIS P1 BASIC4.47□□□□□ -1.69
Scn3aA2ASI5 Gm23271-201ENSMUST00000104052 124 ntBASIC4.47□□□□□ -1.69
Scn3aA2ASI5 5033423K11Rik-201ENSMUST00000117311 787 ntBASIC4.47□□□□□ -1.69
Scn3aA2ASI5 Gm24441-201ENSMUST00000157235 281 ntBASIC4.47□□□□□ -1.69
Scn3aA2ASI5 Cnot2-213ENSMUST00000169921 2120 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
Scn3aA2ASI5 Gm29538-201ENSMUST00000190783 471 ntTSL 2 BASIC4.47□□□□□ -1.69
Scn3aA2ASI5 Gm43717-201ENSMUST00000198684 310 ntBASIC4.47□□□□□ -1.69
Scn3aA2ASI5 Olfr1152-201ENSMUST00000051058 933 ntAPPRIS P1 BASIC4.47□□□□□ -1.69
Scn3aA2ASI5 CT009733.2-202ENSMUST00000224171 4748 ntBASIC4.47□□□□□ -1.69
Scn3aA2ASI5 AI987944-204ENSMUST00000206801 1701 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
Scn3aA2ASI5 Nat1-201ENSMUST00000026677 1347 ntAPPRIS P2 BASIC4.47□□□□□ -1.69
Scn3aA2ASI5 Olfr123-202ENSMUST00000214770 2883 ntAPPRIS P1 TSL 5 BASIC4.47□□□□□ -1.69
Scn3aA2ASI5 Ppm1k-201ENSMUST00000042766 5560 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
Scn3aA2ASI5 Dnah6-203ENSMUST00000114040 12513 ntAPPRIS ALT2 TSL 5 BASIC4.47□□□□□ -1.69
Scn3aA2ASI5 AC167420.1-201ENSMUST00000222999 2121 ntBASIC4.47□□□□□ -1.69
Scn3aA2ASI5 Fnbp1l-203ENSMUST00000162947 1830 ntAPPRIS P1 TSL 5 BASIC4.47□□□□□ -1.69
Scn3aA2ASI5 Gm11893-201ENSMUST00000117829 491 ntBASIC4.46□□□□□ -1.69
Scn3aA2ASI5 Gm12677-201ENSMUST00000118668 426 ntBASIC4.46□□□□□ -1.69
Scn3aA2ASI5 Mup-ps17-201ENSMUST00000120723 218 ntBASIC4.46□□□□□ -1.69
Scn3aA2ASI5 Gm29380-201ENSMUST00000185898 416 ntTSL 5 BASIC4.46□□□□□ -1.69
Scn3aA2ASI5 Bc1-ps1-201ENSMUST00000208471 318 ntBASIC4.46□□□□□ -1.69
Scn3aA2ASI5 Gm21320-201ENSMUST00000211875 861 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.69
Scn3aA2ASI5 Gm18120-201ENSMUST00000220079 511 ntBASIC4.46□□□□□ -1.69
Scn3aA2ASI5 Gm6562-201ENSMUST00000221903 464 ntBASIC4.46□□□□□ -1.69
Scn3aA2ASI5 Cdh7-201ENSMUST00000027542 3390 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.69
Scn3aA2ASI5 Macf1-205ENSMUST00000106220 17608 ntTSL 5 BASIC4.46□□□□□ -1.69
Scn3aA2ASI5 Vmn1r71-204ENSMUST00000227702 5034 ntAPPRIS P2 BASIC4.46□□□□□ -1.69
Scn3aA2ASI5 Zfp329-201ENSMUST00000072222 6727 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
Scn3aA2ASI5 C2cd6-201ENSMUST00000097080 2131 ntAPPRIS P1 TSL 2 BASIC4.46□□□□□ -1.7
Scn3aA2ASI5 Gm37703-201ENSMUST00000192292 1784 ntBASIC4.46□□□□□ -1.7
Scn3aA2ASI5 5830405F06Rik-201ENSMUST00000192753 1755 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
Scn3aA2ASI5 Slc22a22-202ENSMUST00000110196 2368 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
Scn3aA2ASI5 AC123705.2-201ENSMUST00000221653 2009 ntBASIC4.46□□□□□ -1.7
Scn3aA2ASI5 Olfr657-202ENSMUST00000213297 1948 ntAPPRIS P1 TSL 5 BASIC4.46□□□□□ -1.7
Scn3aA2ASI5 Olfr1305-202ENSMUST00000213405 1815 ntAPPRIS P1 TSL 5 BASIC4.46□□□□□ -1.7
Scn3aA2ASI5 Cyp3a11-201ENSMUST00000035918 2344 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
Scn3aA2ASI5 BB287469-201ENSMUST00000110149 1851 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
Scn3aA2ASI5 Gm4027-201ENSMUST00000164838 1850 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
Scn3aA2ASI5 Gm26869-201ENSMUST00000181241 3523 ntTSL 2 BASIC4.46□□□□□ -1.7
Scn3aA2ASI5 BC055308-201ENSMUST00000193380 2538 ntBASIC4.46□□□□□ -1.7
Scn3aA2ASI5 AI314180-203ENSMUST00000107557 4946 ntAPPRIS ALT2 TSL 1 (best) BASIC4.46□□□□□ -1.7
Scn3aA2ASI5 Gm12985-201ENSMUST00000118376 183 ntBASIC4.46□□□□□ -1.7
Scn3aA2ASI5 Gm13307-201ENSMUST00000141375 493 ntTSL 5 BASIC4.46□□□□□ -1.7
Scn3aA2ASI5 Gm11281-201ENSMUST00000141391 576 ntBASIC4.46□□□□□ -1.7
Scn3aA2ASI5 Gm23112-201ENSMUST00000158606 125 ntBASIC4.46□□□□□ -1.7
Scn3aA2ASI5 Gm27189-201ENSMUST00000184119 190 ntBASIC4.46□□□□□ -1.7
Scn3aA2ASI5 Gm20812-202ENSMUST00000189550 1230 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
Scn3aA2ASI5 Gm37791-201ENSMUST00000195081 286 ntBASIC4.46□□□□□ -1.7
Scn3aA2ASI5 Ccr5-202ENSMUST00000111442 8227 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
Scn3aA2ASI5 Vmn1r171-207ENSMUST00000227774 2867 ntAPPRIS ALT2 BASIC4.46□□□□□ -1.7
Scn3aA2ASI5 Tfpi-201ENSMUST00000028487 1492 ntAPPRIS P2 TSL 1 (best) BASIC4.45□□□□□ -1.7
Scn3aA2ASI5 Vmn1r84-202ENSMUST00000226408 2898 ntAPPRIS ALT2 BASIC4.45□□□□□ -1.7
Scn3aA2ASI5 Olfr1356-202ENSMUST00000205100 3023 ntAPPRIS P1 TSL 2 BASIC4.45□□□□□ -1.7
Scn3aA2ASI5 Ryr3-202ENSMUST00000091818 15410 ntAPPRIS ALT2 TSL 5 BASIC4.45□□□□□ -1.7
Scn3aA2ASI5 Gm12693-201ENSMUST00000121965 483 ntBASIC4.45□□□□□ -1.7
Scn3aA2ASI5 Gm22889-201ENSMUST00000158639 58 ntBASIC4.45□□□□□ -1.7
Scn3aA2ASI5 Vmn1r94-201ENSMUST00000164526 918 ntAPPRIS P1 BASIC4.45□□□□□ -1.7
Scn3aA2ASI5 Gm17155-201ENSMUST00000165969 473 ntBASIC4.45□□□□□ -1.7
Scn3aA2ASI5 Vmn1r142-201ENSMUST00000169697 918 ntAPPRIS P1 BASIC4.45□□□□□ -1.7
Scn3aA2ASI5 Gm25025-201ENSMUST00000175018 111 ntBASIC4.45□□□□□ -1.7
Scn3aA2ASI5 Mpc1-ps-201ENSMUST00000181662 330 ntBASIC4.45□□□□□ -1.7
Scn3aA2ASI5 Galntl6-205ENSMUST00000188531 1056 ntTSL 5 BASIC4.45□□□□□ -1.7
Scn3aA2ASI5 Trbv28-201ENSMUST00000192804 264 ntBASIC4.45□□□□□ -1.7
Scn3aA2ASI5 Gm10445-201ENSMUST00000203521 762 ntTSL 2 BASIC4.45□□□□□ -1.7
Scn3aA2ASI5 Gm45037-201ENSMUST00000207475 673 ntTSL 5 BASIC4.45□□□□□ -1.7
Scn3aA2ASI5 Gm44733-202ENSMUST00000209063 582 ntTSL 5 BASIC4.45□□□□□ -1.7
Scn3aA2ASI5 Gm7439-201ENSMUST00000214053 835 ntBASIC4.45□□□□□ -1.7
Scn3aA2ASI5 Olfr153-201ENSMUST00000217113 1258 ntAPPRIS P1 BASIC4.45□□□□□ -1.7
Scn3aA2ASI5 AC138718.1-201ENSMUST00000225947 1009 ntBASIC4.45□□□□□ -1.7
Scn3aA2ASI5 Spink1-201ENSMUST00000025381 422 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
Scn3aA2ASI5 Olfr168-201ENSMUST00000078554 939 ntAPPRIS P1 BASIC4.45□□□□□ -1.7
Scn3aA2ASI5 Olfr597-201ENSMUST00000098203 948 ntAPPRIS P1 BASIC4.45□□□□□ -1.7
Scn3aA2ASI5 Olfr986-202ENSMUST00000214763 3274 ntAPPRIS P1 TSL 5 BASIC4.45□□□□□ -1.7
Scn3aA2ASI5 Gm4064-201ENSMUST00000187482 1561 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
Scn3aA2ASI5 Csnka2ip-202ENSMUST00000209382 2859 ntAPPRIS ALT2 TSL 5 BASIC4.45□□□□□ -1.7
Scn3aA2ASI5 Olfr273-202ENSMUST00000107670 4796 ntAPPRIS P1 TSL 5 BASIC4.45□□□□□ -1.7
Scn3aA2ASI5 Evi2-202ENSMUST00000170422 3944 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
Scn3aA2ASI5 Gm37936-201ENSMUST00000194647 1322 ntBASIC4.45□□□□□ -1.7
Scn3aA2ASI5 C87414-206ENSMUST00000162964 2852 ntAPPRIS P2 TSL 1 (best) BASIC4.45□□□□□ -1.7
Scn3aA2ASI5 Zfp708-201ENSMUST00000109742 2416 ntAPPRIS P2 TSL 1 (best) BASIC4.45□□□□□ -1.7
Scn3aA2ASI5 Fam19a1-202ENSMUST00000122120 3252 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
Scn3aA2ASI5 Trav10-201ENSMUST00000103583 406 ntAPPRIS P1 BASIC4.44□□□□□ -1.7
Scn3aA2ASI5 Defa-ps9-201ENSMUST00000118264 276 ntBASIC4.44□□□□□ -1.7
Scn3aA2ASI5 Gm26320-201ENSMUST00000157742 306 ntBASIC4.44□□□□□ -1.7
Scn3aA2ASI5 Ang-ps2-201ENSMUST00000178173 433 ntBASIC4.44□□□□□ -1.7
Scn3aA2ASI5 Gm26556-201ENSMUST00000180645 320 ntBASIC4.44□□□□□ -1.7
Scn3aA2ASI5 AV026068-203ENSMUST00000185946 668 ntTSL 3 BASIC4.44□□□□□ -1.7
Scn3aA2ASI5 1700040K01Rik-201ENSMUST00000195145 438 ntBASIC4.44□□□□□ -1.7
Scn3aA2ASI5 AC165164.2-201ENSMUST00000220313 392 ntTSL 3 BASIC4.44□□□□□ -1.7
Scn3aA2ASI5 AC121898.1-201ENSMUST00000227599 288 ntBASIC4.44□□□□□ -1.7
Scn3aA2ASI5 Olfr259-201ENSMUST00000099862 939 ntAPPRIS P1 BASIC4.44□□□□□ -1.7
Scn3aA2ASI5 Olfr459-202ENSMUST00000214752 3715 ntAPPRIS P1 TSL 5 BASIC4.44□□□□□ -1.7
Scn3aA2ASI5 Skint5-204ENSMUST00000171627 1611 ntTSL 5 BASIC4.44□□□□□ -1.7
Scn3aA2ASI5 Eda2r-201ENSMUST00000037353 4752 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
Scn3aA2ASI5 Vmn1r196-204ENSMUST00000228382 6525 ntAPPRIS P2 BASIC4.44□□□□□ -1.7
Scn3aA2ASI5 Olr1-201ENSMUST00000032265 3572 ntAPPRIS P3 TSL 1 (best) BASIC4.44□□□□□ -1.7
Retrieved 100 of 76,532 protein–RNA pairs in 80.1 ms