Protein–RNA interactions for Protein: Q9QZ28

Six6, Homeobox protein SIX6, mousemouse

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six6Q9QZ28 Gm11746-201ENSMUST00000119843 821 ntBASIC3.25□□□□□ -1.89
Six6Q9QZ28 Gm11718-201ENSMUST00000119942 537 ntBASIC3.25□□□□□ -1.89
Six6Q9QZ28 Tctex1d1-203ENSMUST00000125417 859 ntAPPRIS ALT2 TSL 5 BASIC3.25□□□□□ -1.89
Six6Q9QZ28 Gm4660-201ENSMUST00000131499 403 ntBASIC3.25□□□□□ -1.89
Six6Q9QZ28 Gm11479-201ENSMUST00000134275 387 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
Six6Q9QZ28 Gm23905-201ENSMUST00000157568 109 ntBASIC3.25□□□□□ -1.89
Six6Q9QZ28 Gm16567-201ENSMUST00000160967 576 ntTSL 5 BASIC3.25□□□□□ -1.89
Six6Q9QZ28 Vmn1r170-201ENSMUST00000170166 915 ntAPPRIS P1 BASIC3.25□□□□□ -1.89
Six6Q9QZ28 Mir3070b-201ENSMUST00000175205 89 ntBASIC3.25□□□□□ -1.89
Six6Q9QZ28 Gm26621-201ENSMUST00000180413 700 ntTSL 2 BASIC3.25□□□□□ -1.89
Six6Q9QZ28 Zfp-ps-201ENSMUST00000185025 478 ntBASIC3.25□□□□□ -1.89
Six6Q9QZ28 1700060O08Rik-201ENSMUST00000185390 281 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
Six6Q9QZ28 Gm8641-201ENSMUST00000186995 826 ntBASIC3.25□□□□□ -1.89
Six6Q9QZ28 Gm2427-201ENSMUST00000189121 881 ntBASIC3.25□□□□□ -1.89
Six6Q9QZ28 Gm28396-201ENSMUST00000190309 379 ntBASIC3.25□□□□□ -1.89
Six6Q9QZ28 Gm5829-201ENSMUST00000191383 351 ntBASIC3.25□□□□□ -1.89
Six6Q9QZ28 Gm18382-201ENSMUST00000194394 582 ntBASIC3.25□□□□□ -1.89
Six6Q9QZ28 C78283-201ENSMUST00000202711 848 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
Six6Q9QZ28 Gm44623-201ENSMUST00000207934 434 ntBASIC3.25□□□□□ -1.89
Six6Q9QZ28 Gm18672-201ENSMUST00000208035 270 ntBASIC3.25□□□□□ -1.89
Six6Q9QZ28 Gm18127-201ENSMUST00000208479 725 ntBASIC3.25□□□□□ -1.89
Six6Q9QZ28 Gm8556-201ENSMUST00000210437 664 ntBASIC3.25□□□□□ -1.89
Six6Q9QZ28 Gm45485-201ENSMUST00000211229 357 ntBASIC3.25□□□□□ -1.89
Six6Q9QZ28 Jakmip1-216ENSMUST00000212997 138 ntAPPRIS P1 TSL 5 BASIC3.25□□□□□ -1.89
Six6Q9QZ28 Pik3ca-201ENSMUST00000029201 8917 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
Six6Q9QZ28 Scrg1-201ENSMUST00000034023 700 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
Six6Q9QZ28 Fcer1a-201ENSMUST00000049706 998 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
Six6Q9QZ28 Olfr502-201ENSMUST00000078933 1059 ntAPPRIS P1 BASIC3.25□□□□□ -1.89
Six6Q9QZ28 n-R5s220-201ENSMUST00000082926 120 ntBASIC3.25□□□□□ -1.89
Six6Q9QZ28 Zfp850-201ENSMUST00000099111 941 ntBASIC3.25□□□□□ -1.89
Six6Q9QZ28 Gm43200-201ENSMUST00000200385 2161 ntBASIC3.25□□□□□ -1.89
Six6Q9QZ28 CT025577.1-201ENSMUST00000220862 2846 ntBASIC3.25□□□□□ -1.89
Six6Q9QZ28 Wnk3-205ENSMUST00000184392 5394 ntAPPRIS P4 TSL 1 (best) BASIC3.25□□□□□ -1.89
Six6Q9QZ28 0610010F05Rik-201ENSMUST00000043356 4392 ntAPPRIS P2 TSL 5 BASIC3.24□□□□□ -1.89
Six6Q9QZ28 Lyst-201ENSMUST00000110559 13181 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
Six6Q9QZ28 Vmn1r14-202ENSMUST00000227209 6857 ntAPPRIS ALT2 BASIC3.24□□□□□ -1.89
Six6Q9QZ28 Ighv3-5-201ENSMUST00000103479 299 ntAPPRIS P1 BASIC3.24□□□□□ -1.89
Six6Q9QZ28 n-R5s52-201ENSMUST00000104614 113 ntBASIC3.24□□□□□ -1.89
Six6Q9QZ28 Gm11830-201ENSMUST00000120175 561 ntBASIC3.24□□□□□ -1.89
Six6Q9QZ28 Gm14916-201ENSMUST00000121904 204 ntBASIC3.24□□□□□ -1.89
Six6Q9QZ28 Gm12224-202ENSMUST00000127107 726 ntTSL 3 BASIC3.24□□□□□ -1.89
Six6Q9QZ28 8030453O22Rik-201ENSMUST00000128919 370 ntTSL 3 BASIC3.24□□□□□ -1.89
Six6Q9QZ28 Gm13599-201ENSMUST00000134476 678 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
Six6Q9QZ28 Gm23327-201ENSMUST00000157420 78 ntBASIC3.24□□□□□ -1.89
Six6Q9QZ28 Gm26034-201ENSMUST00000158154 116 ntBASIC3.24□□□□□ -1.89
Six6Q9QZ28 Gm3008-201ENSMUST00000160566 571 ntBASIC3.24□□□□□ -1.89
Six6Q9QZ28 Otx2os1-201ENSMUST00000183522 866 ntTSL 3 BASIC3.24□□□□□ -1.89
Six6Q9QZ28 Mir6903-201ENSMUST00000183597 88 ntBASIC3.24□□□□□ -1.89
Six6Q9QZ28 1700027I24Rik-201ENSMUST00000183612 696 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
Six6Q9QZ28 Gm27445-201ENSMUST00000184484 72 ntBASIC3.24□□□□□ -1.89
Six6Q9QZ28 1700109I08Rik-201ENSMUST00000185680 396 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
Six6Q9QZ28 Gm20954-201ENSMUST00000189078 644 ntBASIC3.24□□□□□ -1.89
Six6Q9QZ28 Olfr416-ps1-201ENSMUST00000192734 804 ntBASIC3.24□□□□□ -1.89
Six6Q9QZ28 Gm43698-202ENSMUST00000202864 555 ntTSL 3 BASIC3.24□□□□□ -1.89
Six6Q9QZ28 Mitf-208ENSMUST00000203938 1074 ntTSL 5 BASIC3.24□□□□□ -1.89
Six6Q9QZ28 Gm44032-201ENSMUST00000204841 166 ntBASIC3.24□□□□□ -1.89
Six6Q9QZ28 4930555G07Rik-202ENSMUST00000219879 750 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
Six6Q9QZ28 AC158631.2-201ENSMUST00000219999 478 ntBASIC3.24□□□□□ -1.89
Six6Q9QZ28 Gm35865-201ENSMUST00000220180 287 ntTSL 3 BASIC3.24□□□□□ -1.89
Six6Q9QZ28 Gm40692-201ENSMUST00000220411 491 ntBASIC3.24□□□□□ -1.89
Six6Q9QZ28 AC132237.2-201ENSMUST00000221702 1209 ntBASIC3.24□□□□□ -1.89
Six6Q9QZ28 AC125543.1-201ENSMUST00000222778 101 ntBASIC3.24□□□□□ -1.89
Six6Q9QZ28 AC124524.2-201ENSMUST00000223940 588 ntBASIC3.24□□□□□ -1.89
Six6Q9QZ28 AC160962.1-203ENSMUST00000225167 1105 ntAPPRIS P5 BASIC3.24□□□□□ -1.89
Six6Q9QZ28 AC162183.1-202ENSMUST00000225434 904 ntBASIC3.24□□□□□ -1.89
Six6Q9QZ28 AC134420.1-201ENSMUST00000227027 289 ntBASIC3.24□□□□□ -1.89
Six6Q9QZ28 AC080021.1-201ENSMUST00000228104 700 ntBASIC3.24□□□□□ -1.89
Six6Q9QZ28 AC154484.2-201ENSMUST00000228359 818 ntBASIC3.24□□□□□ -1.89
Six6Q9QZ28 Gm4779-201ENSMUST00000056225 672 ntTSL 5 BASIC3.24□□□□□ -1.89
Six6Q9QZ28 Olfr248-201ENSMUST00000075329 1010 ntAPPRIS P1 BASIC3.24□□□□□ -1.89
Six6Q9QZ28 Olfr830-201ENSMUST00000078861 948 ntAPPRIS P2 BASIC3.24□□□□□ -1.89
Six6Q9QZ28 Gm7233-201ENSMUST00000168619 1761 ntAPPRIS P1 TSL 5 BASIC3.24□□□□□ -1.89
Six6Q9QZ28 A230004M16Rik-202ENSMUST00000139508 4468 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
Six6Q9QZ28 Cd86-201ENSMUST00000089620 2539 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
Six6Q9QZ28 Kctd4-201ENSMUST00000050120 3998 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
Six6Q9QZ28 Slco6d1-202ENSMUST00000160796 2032 ntAPPRIS ALT2 TSL 1 (best) BASIC3.24□□□□□ -1.89
Six6Q9QZ28 Pak3-201ENSMUST00000033640 8348 ntAPPRIS ALT1 TSL 1 (best) BASIC3.23□□□□□ -1.89
Six6Q9QZ28 Mmrn1-201ENSMUST00000129603 4477 ntAPPRIS P3 TSL 1 (best) BASIC3.23□□□□□ -1.89
Six6Q9QZ28 Nat1-201ENSMUST00000026677 1347 ntAPPRIS P2 BASIC3.23□□□□□ -1.89
Six6Q9QZ28 Cdc27-203ENSMUST00000106962 3160 ntTSL 5 BASIC3.23□□□□□ -1.89
Six6Q9QZ28 Cask-202ENSMUST00000115435 726 ntTSL 3 BASIC3.23□□□□□ -1.89
Six6Q9QZ28 Mup12-201ENSMUST00000117932 926 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
Six6Q9QZ28 Gm26476-201ENSMUST00000122618 313 ntBASIC3.23□□□□□ -1.89
Six6Q9QZ28 Gm11844-201ENSMUST00000129207 459 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
Six6Q9QZ28 Gm15017-201ENSMUST00000141989 632 ntTSL 5 BASIC3.23□□□□□ -1.89
Six6Q9QZ28 Gm23585-201ENSMUST00000157656 102 ntBASIC3.23□□□□□ -1.89
Six6Q9QZ28 Gm24976-201ENSMUST00000158972 135 ntBASIC3.23□□□□□ -1.89
Six6Q9QZ28 Vmn1r103-201ENSMUST00000163461 918 ntAPPRIS P1 BASIC3.23□□□□□ -1.89
Six6Q9QZ28 Vmn1r151-201ENSMUST00000166079 918 ntAPPRIS P1 BASIC3.23□□□□□ -1.89
Six6Q9QZ28 Gm8362-202ENSMUST00000170673 997 ntAPPRIS ALT2 TSL 5 BASIC3.23□□□□□ -1.89
Six6Q9QZ28 Vmn2r-ps59-201ENSMUST00000174596 135 ntBASIC3.23□□□□□ -1.89
Six6Q9QZ28 Clec4e-207ENSMUST00000177367 729 ntAPPRIS ALT2 TSL 3 BASIC3.23□□□□□ -1.89
Six6Q9QZ28 Gm20795-201ENSMUST00000178528 699 ntAPPRIS P1 BASIC3.23□□□□□ -1.89
Six6Q9QZ28 Gm8298-201ENSMUST00000179799 1206 ntAPPRIS P1 TSL 5 BASIC3.23□□□□□ -1.89
Six6Q9QZ28 Gm21425-201ENSMUST00000180318 699 ntAPPRIS P1 BASIC3.23□□□□□ -1.89
Six6Q9QZ28 Gm37898-201ENSMUST00000193781 174 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
Six6Q9QZ28 5430434I15Rik-201ENSMUST00000197658 1257 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
Six6Q9QZ28 Gm43919-201ENSMUST00000204303 364 ntBASIC3.23□□□□□ -1.89
Six6Q9QZ28 Vmn2r-ps61-201ENSMUST00000207286 889 ntBASIC3.23□□□□□ -1.89
Six6Q9QZ28 Olfr516-203ENSMUST00000217279 1441 ntAPPRIS P1 TSL 5 BASIC3.23□□□□□ -1.89
Retrieved 100 of 76,532 protein–RNA pairs in 78.5 ms