Protein–RNA interactions for Protein: Q9JKE2

Trem1, Triggering receptor expressed on myeloid cells 1, mousemouse

Predictions only

Length 230 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trem1Q9JKE2 Gm14393-201ENSMUST00000072895 625 ntAPPRIS P1 TSL 2 BASIC3.99□□□□□ -1.77
Trem1Q9JKE2 Gm11808-201ENSMUST00000089430 504 ntAPPRIS P1 BASIC3.99□□□□□ -1.77
Trem1Q9JKE2 Macc1-202ENSMUST00000221866 6937 ntAPPRIS P1 TSL 5 BASIC3.99□□□□□ -1.77
Trem1Q9JKE2 AC124346.2-201ENSMUST00000217986 5083 ntBASIC3.99□□□□□ -1.77
Trem1Q9JKE2 Depdc1a-201ENSMUST00000029825 2920 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
Trem1Q9JKE2 1700091H14Rik-202ENSMUST00000185725 1388 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
Trem1Q9JKE2 Gnat3-201ENSMUST00000030561 1361 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
Trem1Q9JKE2 4930510E17Rik-201ENSMUST00000034550 1639 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
Trem1Q9JKE2 Gm15226-201ENSMUST00000156526 2971 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
Trem1Q9JKE2 Mga-204ENSMUST00000110774 13931 ntAPPRIS P3 TSL 5 BASIC3.99□□□□□ -1.77
Trem1Q9JKE2 Gm37115-201ENSMUST00000193750 2849 ntBASIC3.99□□□□□ -1.77
Trem1Q9JKE2 Gpm6a-201ENSMUST00000033915 3215 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
Trem1Q9JKE2 Zfp595-203ENSMUST00000168892 4040 ntAPPRIS P2 TSL 1 (best) BASIC3.98□□□□□ -1.77
Trem1Q9JKE2 Vmn2r-ps94-201ENSMUST00000116665 1456 ntBASIC3.98□□□□□ -1.77
Trem1Q9JKE2 Gm21854-202ENSMUST00000190391 1480 ntAPPRIS P1 TSL 5 BASIC3.98□□□□□ -1.77
Trem1Q9JKE2 Gm18432-201ENSMUST00000195568 1451 ntBASIC3.98□□□□□ -1.77
Trem1Q9JKE2 Klhl28-203ENSMUST00000222508 6459 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
Trem1Q9JKE2 CAAA01194877.1-201ENSMUST00000213137 4233 ntBASIC3.98□□□□□ -1.77
Trem1Q9JKE2 Vmn1r58-201ENSMUST00000108569 10140 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
Trem1Q9JKE2 Gm43259-201ENSMUST00000198446 3277 ntBASIC3.98□□□□□ -1.77
Trem1Q9JKE2 Gm15095-201ENSMUST00000118996 1430 ntBASIC3.98□□□□□ -1.77
Trem1Q9JKE2 Gm30524-201ENSMUST00000204271 2300 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
Trem1Q9JKE2 Znf41-ps-201ENSMUST00000122051 2413 ntBASIC3.98□□□□□ -1.77
Trem1Q9JKE2 Gm13023-202ENSMUST00000105770 833 ntAPPRIS ALT2 TSL 2 BASIC3.98□□□□□ -1.77
Trem1Q9JKE2 Spaca1-203ENSMUST00000108148 833 ntAPPRIS ALT2 TSL 1 (best) BASIC3.98□□□□□ -1.77
Trem1Q9JKE2 Prl-202ENSMUST00000110369 895 ntAPPRIS P2 TSL 1 (best) BASIC3.98□□□□□ -1.77
Trem1Q9JKE2 Gm15074-201ENSMUST00000117603 936 ntBASIC3.98□□□□□ -1.77
Trem1Q9JKE2 Rps15a-ps8-201ENSMUST00000117914 387 ntBASIC3.98□□□□□ -1.77
Trem1Q9JKE2 Gm14335-201ENSMUST00000119165 810 ntBASIC3.98□□□□□ -1.77
Trem1Q9JKE2 Gm11719-201ENSMUST00000119399 351 ntBASIC3.98□□□□□ -1.77
Trem1Q9JKE2 Gm15818-201ENSMUST00000134692 656 ntTSL 3 BASIC3.98□□□□□ -1.77
Trem1Q9JKE2 Gm11507-201ENSMUST00000156462 412 ntBASIC3.98□□□□□ -1.77
Trem1Q9JKE2 Gm22036-201ENSMUST00000157279 215 ntBASIC3.98□□□□□ -1.77
Trem1Q9JKE2 Gm16161-201ENSMUST00000162239 290 ntTSL 2 BASIC3.98□□□□□ -1.77
Trem1Q9JKE2 4930445B16Rik-201ENSMUST00000170085 1123 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
Trem1Q9JKE2 Gm27025-201ENSMUST00000182392 942 ntBASIC3.98□□□□□ -1.77
Trem1Q9JKE2 Scgb2b17-203ENSMUST00000182673 434 ntAPPRIS P2 TSL 2 BASIC3.98□□□□□ -1.77
Trem1Q9JKE2 Scgb2b15-201ENSMUST00000182975 434 ntAPPRIS P1 TSL 2 BASIC3.98□□□□□ -1.77
Trem1Q9JKE2 Gm27022-201ENSMUST00000183225 715 ntTSL 3 BASIC3.98□□□□□ -1.77
Trem1Q9JKE2 Gm28889-201ENSMUST00000185350 959 ntTSL 5 BASIC3.98□□□□□ -1.77
Trem1Q9JKE2 Gm28129-201ENSMUST00000186273 537 ntTSL 5 BASIC3.98□□□□□ -1.77
Trem1Q9JKE2 Gm29426-202ENSMUST00000186564 536 ntTSL 5 BASIC3.98□□□□□ -1.77
Trem1Q9JKE2 Gm28830-201ENSMUST00000188192 213 ntBASIC3.98□□□□□ -1.77
Trem1Q9JKE2 Gm29000-207ENSMUST00000190152 1160 ntTSL 5 BASIC3.98□□□□□ -1.77
Trem1Q9JKE2 Gm29341-201ENSMUST00000190179 370 ntTSL 5 BASIC3.98□□□□□ -1.77
Trem1Q9JKE2 Gm29130-201ENSMUST00000191015 618 ntTSL 5 BASIC3.98□□□□□ -1.77
Trem1Q9JKE2 Gm31942-201ENSMUST00000192534 827 ntTSL 5 BASIC3.98□□□□□ -1.77
Trem1Q9JKE2 Gm10292-202ENSMUST00000193165 585 ntBASIC3.98□□□□□ -1.77
Trem1Q9JKE2 Gm38108-201ENSMUST00000193891 399 ntTSL 5 BASIC3.98□□□□□ -1.77
Trem1Q9JKE2 4930558C23Rik-201ENSMUST00000196239 731 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
Trem1Q9JKE2 Gm43608-201ENSMUST00000197703 687 ntTSL 3 BASIC3.98□□□□□ -1.77
Trem1Q9JKE2 Gm33952-201ENSMUST00000197795 408 ntBASIC3.98□□□□□ -1.77
Trem1Q9JKE2 Gm9173-201ENSMUST00000198054 400 ntBASIC3.98□□□□□ -1.77
Trem1Q9JKE2 Csn1s2a-209ENSMUST00000200322 797 ntAPPRIS ALT2 TSL 2 BASIC3.98□□□□□ -1.77
Trem1Q9JKE2 Gm7721-201ENSMUST00000200446 546 ntBASIC3.98□□□□□ -1.77
Trem1Q9JKE2 Gm31532-201ENSMUST00000203555 767 ntBASIC3.98□□□□□ -1.77
Trem1Q9JKE2 4930555G07Rik-202ENSMUST00000219879 750 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
Trem1Q9JKE2 Gm5215-201ENSMUST00000054380 405 ntBASIC3.98□□□□□ -1.77
Trem1Q9JKE2 Vmn1r226-201ENSMUST00000061756 897 ntAPPRIS P1 BASIC3.98□□□□□ -1.77
Trem1Q9JKE2 Olfr1260-201ENSMUST00000061830 933 ntAPPRIS P1 BASIC3.98□□□□□ -1.77
Trem1Q9JKE2 Olfr768-201ENSMUST00000063031 939 ntAPPRIS P1 BASIC3.98□□□□□ -1.77
Trem1Q9JKE2 Olfr777-201ENSMUST00000080313 936 ntAPPRIS P1 BASIC3.98□□□□□ -1.77
Trem1Q9JKE2 Prl3d2-201ENSMUST00000080755 853 ntAPPRIS P2 TSL 5 BASIC3.98□□□□□ -1.77
Trem1Q9JKE2 Olfr1271-201ENSMUST00000099751 918 ntAPPRIS P1 BASIC3.98□□□□□ -1.77
Trem1Q9JKE2 Klra2-201ENSMUST00000032306 1799 ntAPPRIS P3 TSL 1 (best) BASIC3.98□□□□□ -1.77
Trem1Q9JKE2 Vmn1r197-203ENSMUST00000227017 5158 ntAPPRIS P1 BASIC3.98□□□□□ -1.77
Trem1Q9JKE2 Olfr1449-203ENSMUST00000214079 1304 ntAPPRIS P1 TSL 5 BASIC3.97□□□□□ -1.77
Trem1Q9JKE2 Gm4631-202ENSMUST00000121393 4402 ntAPPRIS P1 TSL 2 BASIC3.97□□□□□ -1.77
Trem1Q9JKE2 Nap1l1-202ENSMUST00000171797 3926 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
Trem1Q9JKE2 Nap1l1-204ENSMUST00000218828 3934 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
Trem1Q9JKE2 Txndc8-201ENSMUST00000102897 620 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
Trem1Q9JKE2 Mup6-202ENSMUST00000107520 540 ntAPPRIS P1 TSL 5 BASIC3.97□□□□□ -1.77
Trem1Q9JKE2 Gm3443-201ENSMUST00000112772 285 ntAPPRIS P1 TSL 3 BASIC3.97□□□□□ -1.77
Trem1Q9JKE2 Rps15a-ps7-201ENSMUST00000117430 392 ntBASIC3.97□□□□□ -1.77
Trem1Q9JKE2 Gm13867-201ENSMUST00000120844 395 ntBASIC3.97□□□□□ -1.77
Trem1Q9JKE2 Gm8356-202ENSMUST00000164917 984 ntAPPRIS ALT2 TSL 5 BASIC3.97□□□□□ -1.77
Trem1Q9JKE2 Cst12-202ENSMUST00000168443 546 ntAPPRIS P2 TSL 1 (best) BASIC3.97□□□□□ -1.77
Trem1Q9JKE2 Mir6393-201ENSMUST00000183709 94 ntBASIC3.97□□□□□ -1.77
Trem1Q9JKE2 Gm6712-202ENSMUST00000186431 526 ntTSL 5 BASIC3.97□□□□□ -1.77
Trem1Q9JKE2 1700029E06Rik-201ENSMUST00000189036 757 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
Trem1Q9JKE2 2810025M15Rik-203ENSMUST00000189791 251 ntBASIC3.97□□□□□ -1.77
Trem1Q9JKE2 Gm29433-201ENSMUST00000191241 253 ntTSL 5 BASIC3.97□□□□□ -1.77
Trem1Q9JKE2 1700016F12Rik-201ENSMUST00000198159 655 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
Trem1Q9JKE2 Gm31831-202ENSMUST00000198581 278 ntTSL 5 BASIC3.97□□□□□ -1.77
Trem1Q9JKE2 Gm8774-201ENSMUST00000203621 692 ntBASIC3.97□□□□□ -1.77
Trem1Q9JKE2 Olfr840-ps1-201ENSMUST00000211827 917 ntBASIC3.97□□□□□ -1.77
Trem1Q9JKE2 AC161250.1-201ENSMUST00000213426 1111 ntBASIC3.97□□□□□ -1.77
Trem1Q9JKE2 AC153532.1-201ENSMUST00000218126 1111 ntBASIC3.97□□□□□ -1.77
Trem1Q9JKE2 AC164576.1-201ENSMUST00000218783 693 ntTSL 5 BASIC3.97□□□□□ -1.77
Trem1Q9JKE2 AC127279.1-201ENSMUST00000220140 637 ntBASIC3.97□□□□□ -1.77
Trem1Q9JKE2 AC127337.1-201ENSMUST00000220423 625 ntTSL 2 BASIC3.97□□□□□ -1.77
Trem1Q9JKE2 Olfr147-201ENSMUST00000056364 1166 ntAPPRIS P2 TSL 2 BASIC3.97□□□□□ -1.77
Trem1Q9JKE2 Olfr804-201ENSMUST00000077312 945 ntAPPRIS P1 BASIC3.97□□□□□ -1.77
Trem1Q9JKE2 Gm25810-201ENSMUST00000082752 108 ntBASIC3.97□□□□□ -1.77
Trem1Q9JKE2 Gm9386-201ENSMUST00000095195 381 ntBASIC3.97□□□□□ -1.77
Trem1Q9JKE2 Olfr677-201ENSMUST00000098161 939 ntAPPRIS P1 BASIC3.97□□□□□ -1.77
Trem1Q9JKE2 Olfr1170-201ENSMUST00000099831 951 ntAPPRIS P1 BASIC3.97□□□□□ -1.77
Trem1Q9JKE2 Gm43736-201ENSMUST00000196377 2281 ntBASIC3.97□□□□□ -1.77
Trem1Q9JKE2 Gm13974-201ENSMUST00000144368 1454 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
Trem1Q9JKE2 Olfr1226-204ENSMUST00000215987 3251 ntAPPRIS P1 TSL 5 BASIC3.97□□□□□ -1.77
Retrieved 100 of 76,532 protein–RNA pairs in 83.1 ms