Protein–RNA interactions for Protein: Q9DC48

Cdc40, Pre-mRNA-processing factor 17, mousemouse

Known RBP Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdc40Q9DC48 Gm12719-201ENSMUST00000118859 241 ntBASIC4.06□□□□□ -1.76
Cdc40Q9DC48 Mup-ps21-201ENSMUST00000119998 448 ntBASIC4.06□□□□□ -1.76
Cdc40Q9DC48 Gm12190-201ENSMUST00000120001 187 ntBASIC4.06□□□□□ -1.76
Cdc40Q9DC48 Gm14303-201ENSMUST00000121320 171 ntBASIC4.06□□□□□ -1.76
Cdc40Q9DC48 Gm13905-201ENSMUST00000140009 579 ntTSL 3 BASIC4.06□□□□□ -1.76
Cdc40Q9DC48 Gm23441-201ENSMUST00000157268 127 ntBASIC4.06□□□□□ -1.76
Cdc40Q9DC48 Gm25264-201ENSMUST00000158519 117 ntBASIC4.06□□□□□ -1.76
Cdc40Q9DC48 Gm15795-201ENSMUST00000160969 553 ntBASIC4.06□□□□□ -1.76
Cdc40Q9DC48 Gm9376-201ENSMUST00000171107 729 ntAPPRIS P1 BASIC4.06□□□□□ -1.76
Cdc40Q9DC48 Vmn1r-ps28-201ENSMUST00000174767 942 ntBASIC4.06□□□□□ -1.76
Cdc40Q9DC48 Gm22859-201ENSMUST00000174978 122 ntBASIC4.06□□□□□ -1.76
Cdc40Q9DC48 Gm23638-201ENSMUST00000175073 126 ntBASIC4.06□□□□□ -1.76
Cdc40Q9DC48 Gm23158-201ENSMUST00000175076 126 ntBASIC4.06□□□□□ -1.76
Cdc40Q9DC48 Gm22907-201ENSMUST00000175198 126 ntBASIC4.06□□□□□ -1.76
Cdc40Q9DC48 Gm22625-201ENSMUST00000175382 126 ntBASIC4.06□□□□□ -1.76
Cdc40Q9DC48 Gm22875-201ENSMUST00000175449 126 ntBASIC4.06□□□□□ -1.76
Cdc40Q9DC48 Gm25197-201ENSMUST00000175516 126 ntBASIC4.06□□□□□ -1.76
Cdc40Q9DC48 Gm27857-201ENSMUST00000176930 126 ntBASIC4.06□□□□□ -1.76
Cdc40Q9DC48 Gm26268-201ENSMUST00000177685 126 ntBASIC4.06□□□□□ -1.76
Cdc40Q9DC48 Gm23681-201ENSMUST00000178821 126 ntBASIC4.06□□□□□ -1.76
Cdc40Q9DC48 Gm21070-201ENSMUST00000182425 985 ntBASIC4.06□□□□□ -1.76
Cdc40Q9DC48 Gm27242-201ENSMUST00000184211 1151 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
Cdc40Q9DC48 Snhg14-202ENSMUST00000185693 734 ntTSL 5 BASIC4.06□□□□□ -1.76
Cdc40Q9DC48 1700003C15Rik-202ENSMUST00000188236 710 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
Cdc40Q9DC48 Gm3496-201ENSMUST00000188283 745 ntBASIC4.06□□□□□ -1.76
Cdc40Q9DC48 1700006P03Rik-201ENSMUST00000191810 409 ntBASIC4.06□□□□□ -1.76
Cdc40Q9DC48 Gm42830-201ENSMUST00000196642 313 ntBASIC4.06□□□□□ -1.76
Cdc40Q9DC48 Gm44376-201ENSMUST00000197570 128 ntBASIC4.06□□□□□ -1.76
Cdc40Q9DC48 Gm43635-201ENSMUST00000202533 352 ntTSL 3 BASIC4.06□□□□□ -1.76
Cdc40Q9DC48 Gm19131-201ENSMUST00000203408 789 ntBASIC4.06□□□□□ -1.76
Cdc40Q9DC48 Gm44145-201ENSMUST00000203711 172 ntTSL 3 BASIC4.06□□□□□ -1.76
Cdc40Q9DC48 Gm44006-201ENSMUST00000204273 396 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
Cdc40Q9DC48 Gm38944-201ENSMUST00000208218 512 ntTSL 2 BASIC4.06□□□□□ -1.76
Cdc40Q9DC48 Gm46190-201ENSMUST00000219650 427 ntBASIC4.06□□□□□ -1.76
Cdc40Q9DC48 AC166056.1-201ENSMUST00000223139 441 ntTSL 5 BASIC4.06□□□□□ -1.76
Cdc40Q9DC48 AC154592.1-201ENSMUST00000225784 574 ntBASIC4.06□□□□□ -1.76
Cdc40Q9DC48 AC174459.2-201ENSMUST00000226036 160 ntBASIC4.06□□□□□ -1.76
Cdc40Q9DC48 AC129935.1-201ENSMUST00000226302 873 ntBASIC4.06□□□□□ -1.76
Cdc40Q9DC48 Mir346-201ENSMUST00000083547 98 ntBASIC4.06□□□□□ -1.76
Cdc40Q9DC48 Mir215-201ENSMUST00000083628 112 ntBASIC4.06□□□□□ -1.76
Cdc40Q9DC48 Adam26b-201ENSMUST00000080135 2476 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
Cdc40Q9DC48 Akap4-201ENSMUST00000057101 2851 ntAPPRIS P4 TSL 1 (best) BASIC4.06□□□□□ -1.76
Cdc40Q9DC48 Themis-202ENSMUST00000060409 2278 ntAPPRIS ALT2 TSL 1 (best) BASIC4.06□□□□□ -1.76
Cdc40Q9DC48 Olfr235-204ENSMUST00000214613 2217 ntAPPRIS P1 TSL 3 BASIC4.06□□□□□ -1.76
Cdc40Q9DC48 9430018G01Rik-201ENSMUST00000203260 3758 ntTSL 5 BASIC4.06□□□□□ -1.76
Cdc40Q9DC48 Pramel6-201ENSMUST00000026956 1540 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
Cdc40Q9DC48 Gm21854-202ENSMUST00000190391 1480 ntAPPRIS P1 TSL 5 BASIC4.05□□□□□ -1.76
Cdc40Q9DC48 Ocrl-202ENSMUST00000115013 2910 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
Cdc40Q9DC48 Olfr715b-202ENSMUST00000215713 3879 ntAPPRIS P1 TSL 5 BASIC4.05□□□□□ -1.76
Cdc40Q9DC48 Gm45321-201ENSMUST00000209286 2863 ntTSL 5 BASIC4.05□□□□□ -1.76
Cdc40Q9DC48 Olfr91-202ENSMUST00000216376 3832 ntAPPRIS P1 TSL 5 BASIC4.05□□□□□ -1.76
Cdc40Q9DC48 Olfr149-202ENSMUST00000215192 2806 ntAPPRIS P1 TSL 5 BASIC4.05□□□□□ -1.76
Cdc40Q9DC48 Gm38057-201ENSMUST00000195551 3203 ntBASIC4.05□□□□□ -1.76
Cdc40Q9DC48 Gm42876-201ENSMUST00000196989 3215 ntBASIC4.05□□□□□ -1.76
Cdc40Q9DC48 Vmn2r51-201ENSMUST00000094863 2559 ntAPPRIS P1 TSL 5 BASIC4.05□□□□□ -1.76
Cdc40Q9DC48 Gm13386-201ENSMUST00000117677 124 ntBASIC4.05□□□□□ -1.76
Cdc40Q9DC48 Amd-ps1-201ENSMUST00000120127 994 ntBASIC4.05□□□□□ -1.76
Cdc40Q9DC48 Cldn34-ps-201ENSMUST00000145498 600 ntBASIC4.05□□□□□ -1.76
Cdc40Q9DC48 Gm22226-201ENSMUST00000157355 109 ntBASIC4.05□□□□□ -1.76
Cdc40Q9DC48 Gm27896-201ENSMUST00000175162 317 ntBASIC4.05□□□□□ -1.76
Cdc40Q9DC48 Rpl31-ps24-201ENSMUST00000181350 379 ntBASIC4.05□□□□□ -1.76
Cdc40Q9DC48 Serpinb10-203ENSMUST00000194951 1194 ntAPPRIS P1 TSL 5 BASIC4.05□□□□□ -1.76
Cdc40Q9DC48 Cycs-ps2-201ENSMUST00000197114 292 ntBASIC4.05□□□□□ -1.76
Cdc40Q9DC48 Ube2l3-ps1-201ENSMUST00000199777 436 ntBASIC4.05□□□□□ -1.76
Cdc40Q9DC48 Gm43604-201ENSMUST00000199799 705 ntBASIC4.05□□□□□ -1.76
Cdc40Q9DC48 Kap-202ENSMUST00000203168 464 ntAPPRIS ALT2 TSL 3 BASIC4.05□□□□□ -1.76
Cdc40Q9DC48 Gm38991-201ENSMUST00000205504 138 ntTSL 5 BASIC4.05□□□□□ -1.76
Cdc40Q9DC48 Gm36371-201ENSMUST00000209043 1103 ntBASIC4.05□□□□□ -1.76
Cdc40Q9DC48 Olfr151-201ENSMUST00000211893 1128 ntAPPRIS P1 BASIC4.05□□□□□ -1.76
Cdc40Q9DC48 Gm8106-201ENSMUST00000213123 523 ntBASIC4.05□□□□□ -1.76
Cdc40Q9DC48 Gm34609-201ENSMUST00000219284 789 ntTSL 5 BASIC4.05□□□□□ -1.76
Cdc40Q9DC48 Gm40477-202ENSMUST00000221505 881 ntTSL 3 BASIC4.05□□□□□ -1.76
Cdc40Q9DC48 AC154548.1-201ENSMUST00000225844 3838 ntBASIC4.05□□□□□ -1.76
Cdc40Q9DC48 Fabp9-201ENSMUST00000029038 583 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
Cdc40Q9DC48 Olfr453-201ENSMUST00000053647 954 ntAPPRIS P1 BASIC4.05□□□□□ -1.76
Cdc40Q9DC48 Spink12-201ENSMUST00000081271 1007 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
Cdc40Q9DC48 n-R5s85-201ENSMUST00000083453 113 ntBASIC4.05□□□□□ -1.76
Cdc40Q9DC48 Olfr1471-201ENSMUST00000096203 945 ntAPPRIS P1 BASIC4.05□□□□□ -1.76
Cdc40Q9DC48 Gm10794-201ENSMUST00000099624 207 ntBASIC4.05□□□□□ -1.76
Cdc40Q9DC48 Olfr1162-201ENSMUST00000099837 945 ntAPPRIS P1 BASIC4.05□□□□□ -1.76
Cdc40Q9DC48 Chl1-201ENSMUST00000066905 7562 ntAPPRIS P2 TSL 1 (best) BASIC4.05□□□□□ -1.76
Cdc40Q9DC48 Olfr787-202ENSMUST00000213329 4958 ntAPPRIS P1 TSL 5 BASIC4.05□□□□□ -1.76
Cdc40Q9DC48 Olfr1318-205ENSMUST00000217533 3747 ntAPPRIS P1 TSL 5 BASIC4.05□□□□□ -1.76
Cdc40Q9DC48 Hdx-201ENSMUST00000038472 9385 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
Cdc40Q9DC48 Gm45211-201ENSMUST00000206208 2650 ntBASIC4.05□□□□□ -1.76
Cdc40Q9DC48 Usp34-208ENSMUST00000180046 12200 ntAPPRIS P1 TSL 5 BASIC4.05□□□□□ -1.76
Cdc40Q9DC48 Fus-202ENSMUST00000079045 2623 ntBASIC4.05□□□□□ -1.76
Cdc40Q9DC48 Vmn1r47-202ENSMUST00000227229 6733 ntAPPRIS P1 BASIC4.05□□□□□ -1.76
Cdc40Q9DC48 Vmn1r47-204ENSMUST00000228680 6717 ntAPPRIS P1 BASIC4.05□□□□□ -1.76
Cdc40Q9DC48 Olfr933-202ENSMUST00000216238 4475 ntAPPRIS P1 TSL 2 BASIC4.05□□□□□ -1.76
Cdc40Q9DC48 1700017N19Rik-206ENSMUST00000190386 1483 ntTSL 5 BASIC4.05□□□□□ -1.76
Cdc40Q9DC48 Zscan4f-202ENSMUST00000145237 1829 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
Cdc40Q9DC48 Cd84-205ENSMUST00000155802 3291 ntAPPRIS P3 TSL 1 (best) BASIC4.04□□□□□ -1.76
Cdc40Q9DC48 Gm43200-201ENSMUST00000200385 2161 ntBASIC4.04□□□□□ -1.76
Cdc40Q9DC48 2310001H17Rik-203ENSMUST00000181517 3981 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
Cdc40Q9DC48 Cd86-201ENSMUST00000089620 2539 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
Cdc40Q9DC48 Gm7269-201ENSMUST00000210819 1373 ntBASIC4.04□□□□□ -1.76
Cdc40Q9DC48 Olfr870-202ENSMUST00000215984 4091 ntAPPRIS P1 TSL 5 BASIC4.04□□□□□ -1.76
Cdc40Q9DC48 Gpr21-201ENSMUST00000065441 3619 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
Cdc40Q9DC48 Olfr616-201ENSMUST00000106886 954 ntAPPRIS P1 BASIC4.04□□□□□ -1.76
Retrieved 100 of 76,532 protein–RNA pairs in 63.9 ms