Protein–RNA interactions for Protein: Q9D6Y1

Ccdc3, Coiled-coil domain-containing protein 3, mousemouse

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc3Q9D6Y1 Gm15553-201ENSMUST00000118757 430 ntBASIC4.15□□□□□ -1.75
Ccdc3Q9D6Y1 Gm12311-201ENSMUST00000118803 374 ntBASIC4.15□□□□□ -1.75
Ccdc3Q9D6Y1 Gm5133-201ENSMUST00000118940 1255 ntBASIC4.15□□□□□ -1.75
Ccdc3Q9D6Y1 Gm9003-201ENSMUST00000121810 482 ntBASIC4.15□□□□□ -1.75
Ccdc3Q9D6Y1 Gm14902-201ENSMUST00000145576 1007 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
Ccdc3Q9D6Y1 Gm23082-201ENSMUST00000157852 133 ntBASIC4.15□□□□□ -1.75
Ccdc3Q9D6Y1 Gm22501-201ENSMUST00000158981 127 ntBASIC4.15□□□□□ -1.75
Ccdc3Q9D6Y1 Gm7568-203ENSMUST00000161626 415 ntTSL 3 BASIC4.15□□□□□ -1.75
Ccdc3Q9D6Y1 Gm25037-201ENSMUST00000175418 110 ntBASIC4.15□□□□□ -1.75
Ccdc3Q9D6Y1 Obox8-201ENSMUST00000184356 1167 ntAPPRIS P1 TSL 5 BASIC4.15□□□□□ -1.75
Ccdc3Q9D6Y1 Gm43825-201ENSMUST00000199650 734 ntBASIC4.15□□□□□ -1.75
Ccdc3Q9D6Y1 Gm43895-201ENSMUST00000203219 855 ntBASIC4.15□□□□□ -1.75
Ccdc3Q9D6Y1 Gm46998-201ENSMUST00000221444 330 ntBASIC4.15□□□□□ -1.75
Ccdc3Q9D6Y1 AC154358.1-201ENSMUST00000224871 218 ntBASIC4.15□□□□□ -1.75
Ccdc3Q9D6Y1 4930504O13Rik-201ENSMUST00000064614 549 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
Ccdc3Q9D6Y1 Rpl21-ps14-201ENSMUST00000080279 483 ntBASIC4.15□□□□□ -1.75
Ccdc3Q9D6Y1 Gm23510-201ENSMUST00000083083 163 ntBASIC4.15□□□□□ -1.75
Ccdc3Q9D6Y1 n-R5s160-201ENSMUST00000083096 120 ntBASIC4.15□□□□□ -1.75
Ccdc3Q9D6Y1 Olfr774-201ENSMUST00000097164 939 ntAPPRIS P1 BASIC4.15□□□□□ -1.75
Ccdc3Q9D6Y1 Dync2h1-206ENSMUST00000147193 13103 ntAPPRIS ALT2 TSL 5 BASIC4.15□□□□□ -1.75
Ccdc3Q9D6Y1 Cd226-201ENSMUST00000037142 2357 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
Ccdc3Q9D6Y1 Olfr813-202ENSMUST00000204622 2410 ntAPPRIS P1 TSL 5 BASIC4.15□□□□□ -1.75
Ccdc3Q9D6Y1 Ccser2-201ENSMUST00000067700 7334 ntTSL 5 BASIC4.15□□□□□ -1.75
Ccdc3Q9D6Y1 Olfr187-202ENSMUST00000207673 1322 ntAPPRIS P1 TSL 2 BASIC4.15□□□□□ -1.75
Ccdc3Q9D6Y1 Gpm6a-201ENSMUST00000033915 3215 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
Ccdc3Q9D6Y1 Gm45160-201ENSMUST00000207112 3099 ntBASIC4.15□□□□□ -1.75
Ccdc3Q9D6Y1 Gm16421-201ENSMUST00000117616 1557 ntBASIC4.14□□□□□ -1.75
Ccdc3Q9D6Y1 Gm38265-201ENSMUST00000193479 3766 ntBASIC4.14□□□□□ -1.75
Ccdc3Q9D6Y1 Cdh10-201ENSMUST00000040562 3407 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
Ccdc3Q9D6Y1 Scel-201ENSMUST00000095576 2424 ntAPPRIS P2 TSL 1 (best) BASIC4.14□□□□□ -1.75
Ccdc3Q9D6Y1 Akap4-201ENSMUST00000057101 2851 ntAPPRIS P4 TSL 1 (best) BASIC4.14□□□□□ -1.75
Ccdc3Q9D6Y1 Gm35755-201ENSMUST00000222392 2077 ntBASIC4.14□□□□□ -1.75
Ccdc3Q9D6Y1 Vmn1r210-202ENSMUST00000226180 3116 ntAPPRIS P1 BASIC4.14□□□□□ -1.75
Ccdc3Q9D6Y1 Cldn34b4-201ENSMUST00000101419 1103 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
Ccdc3Q9D6Y1 Mir676-201ENSMUST00000102443 89 ntBASIC4.14□□□□□ -1.75
Ccdc3Q9D6Y1 Ctps2-203ENSMUST00000112300 741 ntTSL 3 BASIC4.14□□□□□ -1.75
Ccdc3Q9D6Y1 Gm14365-201ENSMUST00000117535 587 ntBASIC4.14□□□□□ -1.75
Ccdc3Q9D6Y1 Gm11877-201ENSMUST00000118921 852 ntBASIC4.14□□□□□ -1.75
Ccdc3Q9D6Y1 Gm13785-201ENSMUST00000119099 690 ntBASIC4.14□□□□□ -1.75
Ccdc3Q9D6Y1 Gm12755-201ENSMUST00000122297 282 ntBASIC4.14□□□□□ -1.75
Ccdc3Q9D6Y1 Gm23229-201ENSMUST00000157297 105 ntBASIC4.14□□□□□ -1.75
Ccdc3Q9D6Y1 Gm17060-201ENSMUST00000172394 824 ntBASIC4.14□□□□□ -1.75
Ccdc3Q9D6Y1 Gm29428-201ENSMUST00000190086 409 ntBASIC4.14□□□□□ -1.75
Ccdc3Q9D6Y1 Gm38201-201ENSMUST00000192143 387 ntBASIC4.14□□□□□ -1.75
Ccdc3Q9D6Y1 Gm44354-201ENSMUST00000196017 143 ntBASIC4.14□□□□□ -1.75
Ccdc3Q9D6Y1 2510017J16Rik-201ENSMUST00000198718 1263 ntBASIC4.14□□□□□ -1.75
Ccdc3Q9D6Y1 Gm43559-201ENSMUST00000198755 466 ntBASIC4.14□□□□□ -1.75
Ccdc3Q9D6Y1 Gm44278-201ENSMUST00000204082 312 ntTSL 2 BASIC4.14□□□□□ -1.75
Ccdc3Q9D6Y1 AU023762-202ENSMUST00000209716 961 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
Ccdc3Q9D6Y1 5430402P08Rik-201ENSMUST00000211799 1143 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
Ccdc3Q9D6Y1 Gm31717-201ENSMUST00000213044 668 ntTSL 5 BASIC4.14□□□□□ -1.75
Ccdc3Q9D6Y1 AC123944.2-201ENSMUST00000215290 382 ntBASIC4.14□□□□□ -1.75
Ccdc3Q9D6Y1 Olfr32-205ENSMUST00000215659 2998 ntAPPRIS P1 TSL 3 BASIC4.14□□□□□ -1.75
Ccdc3Q9D6Y1 Gm30893-201ENSMUST00000220479 903 ntTSL 5 BASIC4.14□□□□□ -1.75
Ccdc3Q9D6Y1 CT009754.4-201ENSMUST00000221430 565 ntBASIC4.14□□□□□ -1.75
Ccdc3Q9D6Y1 AC154738.5-201ENSMUST00000227397 310 ntBASIC4.14□□□□□ -1.75
Ccdc3Q9D6Y1 2610303G11Rik-201ENSMUST00000061643 517 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
Ccdc3Q9D6Y1 Olfr768-201ENSMUST00000063031 939 ntAPPRIS P1 BASIC4.14□□□□□ -1.75
Ccdc3Q9D6Y1 Olfr168-201ENSMUST00000078554 939 ntAPPRIS P1 BASIC4.14□□□□□ -1.75
Ccdc3Q9D6Y1 Vmn1r183-201ENSMUST00000086012 918 ntAPPRIS P1 BASIC4.14□□□□□ -1.75
Ccdc3Q9D6Y1 Olfr1116-201ENSMUST00000090717 924 ntAPPRIS P2 BASIC4.14□□□□□ -1.75
Ccdc3Q9D6Y1 Gm25099-201ENSMUST00000093716 116 ntBASIC4.14□□□□□ -1.75
Ccdc3Q9D6Y1 Olfr1090-201ENSMUST00000099875 942 ntAPPRIS P1 BASIC4.14□□□□□ -1.75
Ccdc3Q9D6Y1 Nebl-206ENSMUST00000131957 1709 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
Ccdc3Q9D6Y1 Gm2888-201ENSMUST00000170521 1758 ntAPPRIS P5 TSL 5 BASIC4.14□□□□□ -1.75
Ccdc3Q9D6Y1 Vmn1r5-203ENSMUST00000228276 3188 ntAPPRIS P1 BASIC4.14□□□□□ -1.75
Ccdc3Q9D6Y1 Gm15226-201ENSMUST00000156526 2971 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
Ccdc3Q9D6Y1 Gm26655-203ENSMUST00000181095 2078 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
Ccdc3Q9D6Y1 Gm26680-203ENSMUST00000181701 2078 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
Ccdc3Q9D6Y1 Gm26630-204ENSMUST00000181759 2078 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
Ccdc3Q9D6Y1 Gm26650-204ENSMUST00000181881 2078 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
Ccdc3Q9D6Y1 AC174797.3-203ENSMUST00000225749 2078 ntBASIC4.14□□□□□ -1.75
Ccdc3Q9D6Y1 Gm37268-201ENSMUST00000192254 2614 ntBASIC4.13□□□□□ -1.75
Ccdc3Q9D6Y1 AC154548.1-201ENSMUST00000225844 3838 ntBASIC4.13□□□□□ -1.75
Ccdc3Q9D6Y1 Olfr128-202ENSMUST00000216440 3644 ntAPPRIS P1 TSL 5 BASIC4.13□□□□□ -1.75
Ccdc3Q9D6Y1 AC129085.3-201ENSMUST00000225686 1705 ntBASIC4.13□□□□□ -1.75
Ccdc3Q9D6Y1 Olfr247-202ENSMUST00000215871 1983 ntAPPRIS P5 TSL 5 BASIC4.13□□□□□ -1.75
Ccdc3Q9D6Y1 Hfm1-201ENSMUST00000112690 5018 ntAPPRIS P1 TSL 5 BASIC4.13□□□□□ -1.75
Ccdc3Q9D6Y1 Vmn1r77-203ENSMUST00000227320 8308 ntAPPRIS P2 BASIC4.13□□□□□ -1.75
Ccdc3Q9D6Y1 Vmn1r66-201ENSMUST00000060374 1524 ntAPPRIS P1 BASIC4.13□□□□□ -1.75
Ccdc3Q9D6Y1 Gm24544-201ENSMUST00000103862 110 ntBASIC4.13□□□□□ -1.75
Ccdc3Q9D6Y1 Vmn1r120-201ENSMUST00000105202 918 ntAPPRIS P1 BASIC4.13□□□□□ -1.75
Ccdc3Q9D6Y1 Gm13550-201ENSMUST00000118185 525 ntBASIC4.13□□□□□ -1.75
Ccdc3Q9D6Y1 Gm14103-201ENSMUST00000119075 366 ntBASIC4.13□□□□□ -1.75
Ccdc3Q9D6Y1 Sult2a-ps2-201ENSMUST00000121135 405 ntBASIC4.13□□□□□ -1.75
Ccdc3Q9D6Y1 Gm25177-201ENSMUST00000122634 117 ntBASIC4.13□□□□□ -1.75
Ccdc3Q9D6Y1 Gm22378-201ENSMUST00000157481 111 ntBASIC4.13□□□□□ -1.75
Ccdc3Q9D6Y1 Gm24675-201ENSMUST00000158757 259 ntBASIC4.13□□□□□ -1.75
Ccdc3Q9D6Y1 Gm17066-202ENSMUST00000165350 1113 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
Ccdc3Q9D6Y1 Gm3191-201ENSMUST00000167139 346 ntBASIC4.13□□□□□ -1.75
Ccdc3Q9D6Y1 Malat1-203ENSMUST00000173499 485 ntTSL 3 BASIC4.13□□□□□ -1.75
Ccdc3Q9D6Y1 Gm22923-201ENSMUST00000174952 110 ntBASIC4.13□□□□□ -1.75
Ccdc3Q9D6Y1 Gm25999-201ENSMUST00000175398 133 ntBASIC4.13□□□□□ -1.75
Ccdc3Q9D6Y1 Gm8498-201ENSMUST00000188227 974 ntBASIC4.13□□□□□ -1.75
Ccdc3Q9D6Y1 Gm36994-201ENSMUST00000192941 492 ntBASIC4.13□□□□□ -1.75
Ccdc3Q9D6Y1 Gm37577-203ENSMUST00000194712 991 ntTSL 5 BASIC4.13□□□□□ -1.75
Ccdc3Q9D6Y1 Mir129b-201ENSMUST00000197461 65 ntBASIC4.13□□□□□ -1.75
Ccdc3Q9D6Y1 Gm43405-201ENSMUST00000198642 337 ntBASIC4.13□□□□□ -1.75
Ccdc3Q9D6Y1 Gm42695-201ENSMUST00000199445 818 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
Ccdc3Q9D6Y1 6030400A10Rik-201ENSMUST00000199734 1212 ntBASIC4.13□□□□□ -1.75
Retrieved 100 of 76,532 protein–RNA pairs in 93 ms