Protein–RNA interactions for Protein: Q9D2H5

Trim42, Tripartite motif-containing protein 42, mousemouse

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim42Q9D2H5 Gm43326-201ENSMUST00000198459 1638 ntBASIC6.02□□□□□ -1.45
Trim42Q9D2H5 Gm44209-201ENSMUST00000204556 4153 ntBASIC6.02□□□□□ -1.45
Trim42Q9D2H5 Cntnap5c-201ENSMUST00000076038 3931 ntAPPRIS P1 TSL 2 BASIC6.02□□□□□ -1.45
Trim42Q9D2H5 Vmn1r210-203ENSMUST00000226294 3500 ntAPPRIS P1 BASIC6.02□□□□□ -1.45
Trim42Q9D2H5 Olfr979-202ENSMUST00000215523 3397 ntAPPRIS P1 TSL 5 BASIC6.01□□□□□ -1.45
Trim42Q9D2H5 Kat7-202ENSMUST00000092766 3414 ntTSL 5 BASIC6.01□□□□□ -1.45
Trim42Q9D2H5 Gm1720-201ENSMUST00000135086 1503 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
Trim42Q9D2H5 Matr3-201ENSMUST00000166793 6262 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
Trim42Q9D2H5 Gm22256-201ENSMUST00000102291 107 ntBASIC6.01□□□□□ -1.45
Trim42Q9D2H5 Iglc2-201ENSMUST00000103749 606 ntAPPRIS ALT2 TSL 1 (best) BASIC6.01□□□□□ -1.45
Trim42Q9D2H5 Gm25879-201ENSMUST00000104330 107 ntBASIC6.01□□□□□ -1.45
Trim42Q9D2H5 Snord72-201ENSMUST00000104549 81 ntBASIC6.01□□□□□ -1.45
Trim42Q9D2H5 Scgb2b3-201ENSMUST00000108090 339 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
Trim42Q9D2H5 Gm14558-201ENSMUST00000117458 381 ntBASIC6.01□□□□□ -1.45
Trim42Q9D2H5 Gm11553-201ENSMUST00000120682 240 ntBASIC6.01□□□□□ -1.45
Trim42Q9D2H5 Gm13214-201ENSMUST00000122137 408 ntBASIC6.01□□□□□ -1.45
Trim42Q9D2H5 Gm12066-201ENSMUST00000123592 443 ntTSL 3 BASIC6.01□□□□□ -1.45
Trim42Q9D2H5 Fam229b-205ENSMUST00000135785 674 ntAPPRIS P1 TSL 3 BASIC6.01□□□□□ -1.45
Trim42Q9D2H5 Gm3362-201ENSMUST00000148102 466 ntBASIC6.01□□□□□ -1.45
Trim42Q9D2H5 Gm26352-201ENSMUST00000158223 125 ntBASIC6.01□□□□□ -1.45
Trim42Q9D2H5 Gm22519-201ENSMUST00000158270 178 ntBASIC6.01□□□□□ -1.45
Trim42Q9D2H5 Gm15900-201ENSMUST00000161584 342 ntBASIC6.01□□□□□ -1.45
Trim42Q9D2H5 Gm6133-201ENSMUST00000164064 948 ntAPPRIS P1 BASIC6.01□□□□□ -1.45
Trim42Q9D2H5 Snrpe-203ENSMUST00000166291 360 ntTSL 3 BASIC6.01□□□□□ -1.45
Trim42Q9D2H5 Gm9376-201ENSMUST00000171107 729 ntAPPRIS P1 BASIC6.01□□□□□ -1.45
Trim42Q9D2H5 Vmn2r-ps116-201ENSMUST00000175997 126 ntBASIC6.01□□□□□ -1.45
Trim42Q9D2H5 Gm20690-201ENSMUST00000177341 315 ntBASIC6.01□□□□□ -1.45
Trim42Q9D2H5 Mir6987-201ENSMUST00000184789 73 ntBASIC6.01□□□□□ -1.45
Trim42Q9D2H5 Krtdap-203ENSMUST00000187493 420 ntTSL 2 BASIC6.01□□□□□ -1.45
Trim42Q9D2H5 1700108F19Rik-203ENSMUST00000188798 619 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
Trim42Q9D2H5 Gm29111-201ENSMUST00000188823 696 ntBASIC6.01□□□□□ -1.45
Trim42Q9D2H5 Gm29229-201ENSMUST00000188874 323 ntBASIC6.01□□□□□ -1.45
Trim42Q9D2H5 Krtdap-205ENSMUST00000189673 345 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
Trim42Q9D2H5 Gm28584-201ENSMUST00000191489 696 ntBASIC6.01□□□□□ -1.45
Trim42Q9D2H5 Gm38138-201ENSMUST00000193274 696 ntBASIC6.01□□□□□ -1.45
Trim42Q9D2H5 2310046K23Rik-201ENSMUST00000193521 677 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
Trim42Q9D2H5 Gm2147-201ENSMUST00000193588 639 ntBASIC6.01□□□□□ -1.45
Trim42Q9D2H5 Gm43616-201ENSMUST00000199347 409 ntTSL 3 BASIC6.01□□□□□ -1.45
Trim42Q9D2H5 Gm43083-201ENSMUST00000199594 476 ntBASIC6.01□□□□□ -1.45
Trim42Q9D2H5 Gm43812-201ENSMUST00000200976 581 ntTSL 5 BASIC6.01□□□□□ -1.45
Trim42Q9D2H5 Gm35037-201ENSMUST00000203144 506 ntTSL 3 BASIC6.01□□□□□ -1.45
Trim42Q9D2H5 Gm44075-201ENSMUST00000204208 216 ntBASIC6.01□□□□□ -1.45
Trim42Q9D2H5 Gm45004-201ENSMUST00000205302 465 ntTSL 2 BASIC6.01□□□□□ -1.45
Trim42Q9D2H5 Gm18507-201ENSMUST00000218855 525 ntBASIC6.01□□□□□ -1.45
Trim42Q9D2H5 AC113204.1-203ENSMUST00000219475 375 ntTSL 3 BASIC6.01□□□□□ -1.45
Trim42Q9D2H5 4930555G07Rik-202ENSMUST00000219879 750 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
Trim42Q9D2H5 AC166341.3-201ENSMUST00000221861 114 ntBASIC6.01□□□□□ -1.45
Trim42Q9D2H5 CT030170.6-203ENSMUST00000222523 1295 ntTSL 5 BASIC6.01□□□□□ -1.45
Trim42Q9D2H5 AC122341.1-201ENSMUST00000227291 560 ntBASIC6.01□□□□□ -1.45
Trim42Q9D2H5 AC135292.2-201ENSMUST00000227559 367 ntBASIC6.01□□□□□ -1.45
Trim42Q9D2H5 AC139350.4-201ENSMUST00000228483 798 ntBASIC6.01□□□□□ -1.45
Trim42Q9D2H5 Gm15732-201ENSMUST00000079794 480 ntBASIC6.01□□□□□ -1.45
Trim42Q9D2H5 Rps24-ps2-201ENSMUST00000091375 395 ntBASIC6.01□□□□□ -1.45
Trim42Q9D2H5 Gm43085-201ENSMUST00000202859 3132 ntBASIC6.01□□□□□ -1.45
Trim42Q9D2H5 Utp14b-201ENSMUST00000053760 7393 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
Trim42Q9D2H5 Pold3-209ENSMUST00000208670 1716 ntTSL 5 BASIC6.01□□□□□ -1.45
Trim42Q9D2H5 CT025604.1-201ENSMUST00000221111 3436 ntBASIC6.01□□□□□ -1.45
Trim42Q9D2H5 Pls3-202ENSMUST00000114057 3160 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
Trim42Q9D2H5 Trim30b-201ENSMUST00000106831 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC6.01□□□□□ -1.45
Trim42Q9D2H5 Filip1l-201ENSMUST00000099667 1576 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
Trim42Q9D2H5 Olfr1416-202ENSMUST00000214928 4838 ntAPPRIS P1 TSL 3 BASIC6.01□□□□□ -1.45
Trim42Q9D2H5 Zfp11-201ENSMUST00000049778 3929 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
Trim42Q9D2H5 Ereg-201ENSMUST00000031324 4128 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
Trim42Q9D2H5 Phf11d-201ENSMUST00000095157 2666 ntAPPRIS P2 TSL 1 (best) BASIC6.01□□□□□ -1.45
Trim42Q9D2H5 Pate2-202ENSMUST00000118254 2215 ntAPPRIS P2 TSL 1 (best) BASIC6.01□□□□□ -1.45
Trim42Q9D2H5 Nfia-201ENSMUST00000052018 9249 ntTSL 5 BASIC6.01□□□□□ -1.45
Trim42Q9D2H5 Cyp2c38-201ENSMUST00000035488 2869 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
Trim42Q9D2H5 Smad2-203ENSMUST00000113930 1305 ntTSL 5 BASIC6□□□□□ -1.45
Trim42Q9D2H5 Ap5m1-208ENSMUST00000228238 3514 ntBASIC6□□□□□ -1.45
Trim42Q9D2H5 Olfr1321-202ENSMUST00000215373 4482 ntAPPRIS P1 TSL 5 BASIC6□□□□□ -1.45
Trim42Q9D2H5 Ktn1-224ENSMUST00000191018 4033 ntAPPRIS ALT2 TSL 5 BASIC6□□□□□ -1.45
Trim42Q9D2H5 Cftr-204ENSMUST00000129452 2835 ntTSL 1 (best) BASIC6□□□□□ -1.45
Trim42Q9D2H5 Mtx3-201ENSMUST00000076169 6275 ntAPPRIS P1 TSL 5 BASIC6□□□□□ -1.45
Trim42Q9D2H5 Gm12468-201ENSMUST00000116189 404 ntBASIC6□□□□□ -1.45
Trim42Q9D2H5 Gm13085-201ENSMUST00000118356 171 ntBASIC6□□□□□ -1.45
Trim42Q9D2H5 Gm12787-201ENSMUST00000119234 396 ntBASIC6□□□□□ -1.45
Trim42Q9D2H5 Gm7421-201ENSMUST00000119298 639 ntBASIC6□□□□□ -1.45
Trim42Q9D2H5 Gm14605-201ENSMUST00000120599 268 ntBASIC6□□□□□ -1.45
Trim42Q9D2H5 Gm7365-201ENSMUST00000120877 639 ntBASIC6□□□□□ -1.45
Trim42Q9D2H5 Gm15349-201ENSMUST00000121154 204 ntBASIC6□□□□□ -1.45
Trim42Q9D2H5 Gm12693-201ENSMUST00000121965 483 ntBASIC6□□□□□ -1.45
Trim42Q9D2H5 Gm12929-201ENSMUST00000122406 370 ntBASIC6□□□□□ -1.45
Trim42Q9D2H5 2210411M09Rik-201ENSMUST00000128545 643 ntTSL 1 (best) BASIC6□□□□□ -1.45
Trim42Q9D2H5 Gm14747-201ENSMUST00000149888 984 ntBASIC6□□□□□ -1.45
Trim42Q9D2H5 Gm25395-201ENSMUST00000157343 272 ntBASIC6□□□□□ -1.45
Trim42Q9D2H5 Mir1945-201ENSMUST00000157919 78 ntBASIC6□□□□□ -1.45
Trim42Q9D2H5 Gm20475-201ENSMUST00000174884 263 ntTSL 3 BASIC6□□□□□ -1.45
Trim42Q9D2H5 Gm25244-201ENSMUST00000178089 132 ntBASIC6□□□□□ -1.45
Trim42Q9D2H5 Gm20767-201ENSMUST00000179071 510 ntAPPRIS P1 BASIC6□□□□□ -1.45
Trim42Q9D2H5 Gm4258-201ENSMUST00000182127 506 ntTSL 2 BASIC6□□□□□ -1.45
Trim42Q9D2H5 Gm8816-201ENSMUST00000182280 1163 ntBASIC6□□□□□ -1.45
Trim42Q9D2H5 Gm27161-201ENSMUST00000183960 562 ntBASIC6□□□□□ -1.45
Trim42Q9D2H5 Mir8105-201ENSMUST00000184718 89 ntBASIC6□□□□□ -1.45
Trim42Q9D2H5 1810041H14Rik-203ENSMUST00000187773 416 ntTSL 5 BASIC6□□□□□ -1.45
Trim42Q9D2H5 Gm37746-201ENSMUST00000193249 198 ntBASIC6□□□□□ -1.45
Trim42Q9D2H5 Gm2229-201ENSMUST00000193328 710 ntBASIC6□□□□□ -1.45
Trim42Q9D2H5 Gm2053-201ENSMUST00000195671 631 ntBASIC6□□□□□ -1.45
Trim42Q9D2H5 Gm7626-201ENSMUST00000195801 353 ntBASIC6□□□□□ -1.45
Trim42Q9D2H5 Gm43467-201ENSMUST00000197441 437 ntBASIC6□□□□□ -1.45
Trim42Q9D2H5 Gm34333-201ENSMUST00000200363 669 ntTSL 3 BASIC6□□□□□ -1.45
Retrieved 100 of 76,532 protein–RNA pairs in 109.4 ms