Protein–RNA interactions for Protein: Q9D1C8

Vps28, Vacuolar protein sorting-associated protein 28 homolog, mousemouse

Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps28Q9D1C8 Gm15103-201ENSMUST00000119893 871 ntBASIC4.81□□□□□ -1.64
Vps28Q9D1C8 Rpl27-ps2-201ENSMUST00000120378 399 ntBASIC4.81□□□□□ -1.64
Vps28Q9D1C8 Usp46os1-201ENSMUST00000129275 508 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
Vps28Q9D1C8 Gm14368-201ENSMUST00000145305 415 ntBASIC4.81□□□□□ -1.64
Vps28Q9D1C8 Gm17430-201ENSMUST00000171339 474 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
Vps28Q9D1C8 Gm4207-201ENSMUST00000173144 960 ntBASIC4.81□□□□□ -1.64
Vps28Q9D1C8 Vmn1r-ps14-201ENSMUST00000176859 913 ntBASIC4.81□□□□□ -1.64
Vps28Q9D1C8 Gm26950-201ENSMUST00000182734 498 ntBASIC4.81□□□□□ -1.64
Vps28Q9D1C8 Mir7022-201ENSMUST00000183749 61 ntBASIC4.81□□□□□ -1.64
Vps28Q9D1C8 Mir6418-201ENSMUST00000185075 115 ntBASIC4.81□□□□□ -1.64
Vps28Q9D1C8 Gm4412-201ENSMUST00000186660 433 ntBASIC4.81□□□□□ -1.64
Vps28Q9D1C8 Faiml-202ENSMUST00000188555 560 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
Vps28Q9D1C8 Gm38214-201ENSMUST00000192581 988 ntBASIC4.81□□□□□ -1.64
Vps28Q9D1C8 Gm37993-201ENSMUST00000195301 988 ntBASIC4.81□□□□□ -1.64
Vps28Q9D1C8 Rnu3a-202ENSMUST00000196710 213 ntBASIC4.81□□□□□ -1.64
Vps28Q9D1C8 Gm43100-201ENSMUST00000202985 674 ntTSL 5 BASIC4.81□□□□□ -1.64
Vps28Q9D1C8 Olfr856-ps1-201ENSMUST00000212177 948 ntBASIC4.81□□□□□ -1.64
Vps28Q9D1C8 AC160635.2-201ENSMUST00000216368 734 ntTSL 5 BASIC4.81□□□□□ -1.64
Vps28Q9D1C8 AC132344.1-201ENSMUST00000221289 376 ntTSL 3 BASIC4.81□□□□□ -1.64
Vps28Q9D1C8 AC160931.2-201ENSMUST00000221445 351 ntBASIC4.81□□□□□ -1.64
Vps28Q9D1C8 Olfr693-201ENSMUST00000057817 952 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
Vps28Q9D1C8 Fam183b-201ENSMUST00000060581 493 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
Vps28Q9D1C8 Olfr846-201ENSMUST00000078774 942 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
Vps28Q9D1C8 Gm25140-201ENSMUST00000083254 140 ntBASIC4.81□□□□□ -1.64
Vps28Q9D1C8 Rnu3a-201ENSMUST00000083936 214 ntBASIC4.81□□□□□ -1.64
Vps28Q9D1C8 Gm12888-201ENSMUST00000097905 1181 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
Vps28Q9D1C8 Gm42494-201ENSMUST00000196515 3051 ntBASIC4.81□□□□□ -1.64
Vps28Q9D1C8 Btbd35f28-201ENSMUST00000105015 1960 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
Vps28Q9D1C8 Btbd35f18-201ENSMUST00000105019 1960 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
Vps28Q9D1C8 Btbd35f11-201ENSMUST00000105020 1960 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
Vps28Q9D1C8 A230057D06Rik-203ENSMUST00000208953 3357 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
Vps28Q9D1C8 Olfr364-ps1-202ENSMUST00000214905 1914 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
Vps28Q9D1C8 Olfr629-203ENSMUST00000216300 2277 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
Vps28Q9D1C8 Gm37749-201ENSMUST00000193917 1899 ntBASIC4.81□□□□□ -1.64
Vps28Q9D1C8 AC155922.2-201ENSMUST00000220240 1458 ntTSL 5 BASIC4.81□□□□□ -1.64
Vps28Q9D1C8 Vmn2r46-201ENSMUST00000171523 2430 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
Vps28Q9D1C8 Gm27013-202ENSMUST00000205067 1436 ntBASIC4.8□□□□□ -1.64
Vps28Q9D1C8 Gm42616-201ENSMUST00000198989 4184 ntBASIC4.8□□□□□ -1.64
Vps28Q9D1C8 Gm2824-202ENSMUST00000180955 3522 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
Vps28Q9D1C8 Tgif1-202ENSMUST00000118283 1388 ntAPPRIS ALT1 TSL 1 (best) BASIC4.8□□□□□ -1.64
Vps28Q9D1C8 Olfr726-206ENSMUST00000217025 1363 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
Vps28Q9D1C8 Gm10521-201ENSMUST00000097466 2574 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
Vps28Q9D1C8 Erv3-201ENSMUST00000040941 3378 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
Vps28Q9D1C8 Gm19744-204ENSMUST00000188936 4533 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
Vps28Q9D1C8 Cmah-202ENSMUST00000110391 9789 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
Vps28Q9D1C8 Gm23193-201ENSMUST00000102427 82 ntBASIC4.8□□□□□ -1.64
Vps28Q9D1C8 Gm14385-201ENSMUST00000116315 876 ntBASIC4.8□□□□□ -1.64
Vps28Q9D1C8 Gm15779-201ENSMUST00000117470 412 ntBASIC4.8□□□□□ -1.64
Vps28Q9D1C8 Gm15745-201ENSMUST00000119807 115 ntBASIC4.8□□□□□ -1.64
Vps28Q9D1C8 Gm15168-201ENSMUST00000121057 316 ntBASIC4.8□□□□□ -1.64
Vps28Q9D1C8 Gm12974-201ENSMUST00000129875 333 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
Vps28Q9D1C8 Gm12735-201ENSMUST00000146218 651 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
Vps28Q9D1C8 Gm24507-201ENSMUST00000157683 134 ntBASIC4.8□□□□□ -1.64
Vps28Q9D1C8 Gm25923-201ENSMUST00000158312 138 ntBASIC4.8□□□□□ -1.64
Vps28Q9D1C8 Sult3a2-201ENSMUST00000165904 882 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
Vps28Q9D1C8 Gm16430-201ENSMUST00000169006 615 ntAPPRIS P1 TSL 3 BASIC4.8□□□□□ -1.64
Vps28Q9D1C8 Vmn1r-ps53-201ENSMUST00000173066 922 ntBASIC4.8□□□□□ -1.64
Vps28Q9D1C8 Obox4-ps29-201ENSMUST00000175956 1134 ntBASIC4.8□□□□□ -1.64
Vps28Q9D1C8 Tppp2-202ENSMUST00000177625 627 ntAPPRIS P1 TSL 3 BASIC4.8□□□□□ -1.64
Vps28Q9D1C8 Gm3453-202ENSMUST00000178308 618 ntAPPRIS ALT2 TSL 5 BASIC4.8□□□□□ -1.64
Vps28Q9D1C8 Gm3127-203ENSMUST00000178386 618 ntAPPRIS ALT2 TSL 5 BASIC4.8□□□□□ -1.64
Vps28Q9D1C8 Gm3187-201ENSMUST00000178429 618 ntAPPRIS ALT2 TSL 5 BASIC4.8□□□□□ -1.64
Vps28Q9D1C8 Gm3685-202ENSMUST00000179199 618 ntAPPRIS ALT2 TSL 5 BASIC4.8□□□□□ -1.64
Vps28Q9D1C8 Gm25019-201ENSMUST00000179732 110 ntBASIC4.8□□□□□ -1.64
Vps28Q9D1C8 Gm38080-201ENSMUST00000194035 268 ntBASIC4.8□□□□□ -1.64
Vps28Q9D1C8 Gm38008-201ENSMUST00000195333 518 ntBASIC4.8□□□□□ -1.64
Vps28Q9D1C8 Gm42926-201ENSMUST00000200496 697 ntBASIC4.8□□□□□ -1.64
Vps28Q9D1C8 Gm31520-201ENSMUST00000203048 733 ntBASIC4.8□□□□□ -1.64
Vps28Q9D1C8 Bsph1-202ENSMUST00000204715 707 ntAPPRIS ALT2 TSL 1 (best) BASIC4.8□□□□□ -1.64
Vps28Q9D1C8 Gm44954-201ENSMUST00000208513 227 ntBASIC4.8□□□□□ -1.64
Vps28Q9D1C8 Gm19269-201ENSMUST00000211401 804 ntBASIC4.8□□□□□ -1.64
Vps28Q9D1C8 Gm30676-201ENSMUST00000214000 1165 ntTSL 5 BASIC4.8□□□□□ -1.64
Vps28Q9D1C8 4930405J17Rik-201ENSMUST00000214323 620 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
Vps28Q9D1C8 Gm30738-201ENSMUST00000221346 502 ntBASIC4.8□□□□□ -1.64
Vps28Q9D1C8 Gm17915-201ENSMUST00000222077 548 ntBASIC4.8□□□□□ -1.64
Vps28Q9D1C8 AC154335.2-201ENSMUST00000225916 638 ntBASIC4.8□□□□□ -1.64
Vps28Q9D1C8 Defb13-201ENSMUST00000060587 452 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
Vps28Q9D1C8 Olfr68-201ENSMUST00000072513 948 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
Vps28Q9D1C8 Olfr881-201ENSMUST00000074611 948 ntBASIC4.8□□□□□ -1.64
Vps28Q9D1C8 Olfr344-201ENSMUST00000075474 930 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
Vps28Q9D1C8 Olfr476-201ENSMUST00000077249 933 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
Vps28Q9D1C8 Olfr1436-201ENSMUST00000087812 948 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
Vps28Q9D1C8 AC147639.2-202ENSMUST00000224834 1545 ntBASIC4.8□□□□□ -1.64
Vps28Q9D1C8 Cnot1-201ENSMUST00000068452 8152 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
Vps28Q9D1C8 Med14-203ENSMUST00000115481 3729 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
Vps28Q9D1C8 Zfp738-203ENSMUST00000137496 13215 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
Vps28Q9D1C8 Bmp15-201ENSMUST00000024049 3060 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
Vps28Q9D1C8 Gm3665-201ENSMUST00000177214 2461 ntBASIC4.8□□□□□ -1.64
Vps28Q9D1C8 Vmn2r-ps51-201ENSMUST00000177271 2461 ntBASIC4.8□□□□□ -1.64
Vps28Q9D1C8 Vsig4-201ENSMUST00000050707 1432 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
Vps28Q9D1C8 Gm43200-201ENSMUST00000200385 2161 ntBASIC4.8□□□□□ -1.64
Vps28Q9D1C8 Gm15624-203ENSMUST00000204811 3402 ntBASIC4.79□□□□□ -1.64
Vps28Q9D1C8 Gm37814-201ENSMUST00000195820 3644 ntBASIC4.79□□□□□ -1.64
Vps28Q9D1C8 AC187103.2-201ENSMUST00000223605 1617 ntBASIC4.79□□□□□ -1.64
Vps28Q9D1C8 Olfr1223-201ENSMUST00000217342 2333 ntAPPRIS P1 TSL 2 BASIC4.79□□□□□ -1.64
Vps28Q9D1C8 Cftr-201ENSMUST00000045706 6303 ntAPPRIS P2 TSL 1 (best) BASIC4.79□□□□□ -1.64
Vps28Q9D1C8 Prl2c1-202ENSMUST00000110335 852 ntAPPRIS ALT2 TSL 5 BASIC4.79□□□□□ -1.64
Vps28Q9D1C8 Gm15126-201ENSMUST00000118631 833 ntBASIC4.79□□□□□ -1.64
Vps28Q9D1C8 Gm6121-201ENSMUST00000119231 924 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
Vps28Q9D1C8 Gm16179-201ENSMUST00000120685 373 ntBASIC4.79□□□□□ -1.64
Retrieved 100 of 76,532 protein–RNA pairs in 76.7 ms