Protein–RNA interactions for Protein: Q9CQ56

Use1, Vesicle transport protein USE1, mousemouse

Predictions only

Length 270 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Use1Q9CQ56 Olfr705-202ENSMUST00000213721 3001 ntAPPRIS P1 TSL 5 BASIC4.07□□□□□ -1.76
Use1Q9CQ56 Kctd12b-202ENSMUST00000112572 4851 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
Use1Q9CQ56 Gm11251-201ENSMUST00000119593 2800 ntBASIC4.07□□□□□ -1.76
Use1Q9CQ56 Obscn-201ENSMUST00000020732 23483 ntTSL 5 BASIC4.07□□□□□ -1.76
Use1Q9CQ56 Olfr1257-202ENSMUST00000111519 2756 ntAPPRIS P1 TSL 2 BASIC4.07□□□□□ -1.76
Use1Q9CQ56 AL589737.1-201ENSMUST00000221163 2763 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
Use1Q9CQ56 AC158605.2-201ENSMUST00000220287 2726 ntAPPRIS P1 TSL 2 BASIC4.07□□□□□ -1.76
Use1Q9CQ56 Gm26869-201ENSMUST00000181241 3523 ntTSL 2 BASIC4.07□□□□□ -1.76
Use1Q9CQ56 Csmd3-201ENSMUST00000100670 13022 ntAPPRIS P1 TSL 5 BASIC4.07□□□□□ -1.76
Use1Q9CQ56 Gm26760-201ENSMUST00000181901 1604 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
Use1Q9CQ56 Arhgap18-201ENSMUST00000039557 3651 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
Use1Q9CQ56 Gm27008-201ENSMUST00000182400 1360 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
Use1Q9CQ56 Lipo5-201ENSMUST00000156818 2003 ntAPPRIS P1 TSL 5 BASIC4.06□□□□□ -1.76
Use1Q9CQ56 Vmn1r18-202ENSMUST00000228574 14315 ntAPPRIS P1 BASIC4.06□□□□□ -1.76
Use1Q9CQ56 Vmn2r77-201ENSMUST00000164996 2565 ntAPPRIS P1 TSL 5 BASIC4.06□□□□□ -1.76
Use1Q9CQ56 Olfr183-204ENSMUST00000214831 1906 ntAPPRIS P1 TSL 5 BASIC4.06□□□□□ -1.76
Use1Q9CQ56 n-R5s82-201ENSMUST00000104213 109 ntBASIC4.06□□□□□ -1.76
Use1Q9CQ56 Gm22899-201ENSMUST00000104540 131 ntBASIC4.06□□□□□ -1.76
Use1Q9CQ56 Gm15603-201ENSMUST00000119252 492 ntBASIC4.06□□□□□ -1.76
Use1Q9CQ56 Gm15517-201ENSMUST00000124863 251 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
Use1Q9CQ56 Gm12092-201ENSMUST00000125194 600 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
Use1Q9CQ56 Olfr405-ps1-202ENSMUST00000127098 711 ntTSL 3 BASIC4.06□□□□□ -1.76
Use1Q9CQ56 Vmn2r-ps85-201ENSMUST00000174022 940 ntBASIC4.06□□□□□ -1.76
Use1Q9CQ56 V1rg10-201ENSMUST00000183378 937 ntBASIC4.06□□□□□ -1.76
Use1Q9CQ56 Gm38221-201ENSMUST00000195146 365 ntBASIC4.06□□□□□ -1.76
Use1Q9CQ56 Gm17775-201ENSMUST00000198542 258 ntBASIC4.06□□□□□ -1.76
Use1Q9CQ56 Gm44736-201ENSMUST00000205943 667 ntTSL 3 BASIC4.06□□□□□ -1.76
Use1Q9CQ56 Gm44765-201ENSMUST00000206927 601 ntBASIC4.06□□□□□ -1.76
Use1Q9CQ56 4930405G09Rik-201ENSMUST00000207912 1060 ntBASIC4.06□□□□□ -1.76
Use1Q9CQ56 Gm45305-201ENSMUST00000209799 815 ntTSL 5 BASIC4.06□□□□□ -1.76
Use1Q9CQ56 Supt4b-201ENSMUST00000214434 351 ntBASIC4.06□□□□□ -1.76
Use1Q9CQ56 AC158686.2-201ENSMUST00000218599 976 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
Use1Q9CQ56 Rpl29-ps2-202ENSMUST00000220540 1165 ntTSL 5 BASIC4.06□□□□□ -1.76
Use1Q9CQ56 AC121804.1-201ENSMUST00000221016 394 ntBASIC4.06□□□□□ -1.76
Use1Q9CQ56 CT030657.1-201ENSMUST00000222397 378 ntTSL 5 BASIC4.06□□□□□ -1.76
Use1Q9CQ56 AC155237.2-201ENSMUST00000228487 478 ntBASIC4.06□□□□□ -1.76
Use1Q9CQ56 Tipin-201ENSMUST00000034964 1211 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
Use1Q9CQ56 Olfr1507-201ENSMUST00000073571 1112 ntAPPRIS P1 BASIC4.06□□□□□ -1.76
Use1Q9CQ56 Olfr781-201ENSMUST00000075613 936 ntAPPRIS P1 BASIC4.06□□□□□ -1.76
Use1Q9CQ56 Gm6462-201ENSMUST00000081488 304 ntBASIC4.06□□□□□ -1.76
Use1Q9CQ56 Eif1-ps1-201ENSMUST00000086606 330 ntBASIC4.06□□□□□ -1.76
Use1Q9CQ56 BB287469-201ENSMUST00000110149 1851 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
Use1Q9CQ56 Gm4027-201ENSMUST00000164838 1850 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
Use1Q9CQ56 Serpinb7-201ENSMUST00000086690 1887 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
Use1Q9CQ56 Gm43834-201ENSMUST00000197097 4830 ntBASIC4.06□□□□□ -1.76
Use1Q9CQ56 Casp12-201ENSMUST00000027009 2649 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
Use1Q9CQ56 Hdx-201ENSMUST00000038472 9385 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
Use1Q9CQ56 Vmn1r171-203ENSMUST00000226321 3067 ntAPPRIS ALT2 BASIC4.06□□□□□ -1.76
Use1Q9CQ56 Slco6d1-202ENSMUST00000160796 2032 ntAPPRIS ALT2 TSL 1 (best) BASIC4.05□□□□□ -1.76
Use1Q9CQ56 Gm21778-202ENSMUST00000185926 1482 ntAPPRIS P1 TSL 5 BASIC4.05□□□□□ -1.76
Use1Q9CQ56 Nap1l1-202ENSMUST00000171797 3926 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
Use1Q9CQ56 Nap1l1-204ENSMUST00000218828 3934 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
Use1Q9CQ56 Zfp101-204ENSMUST00000174512 3743 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
Use1Q9CQ56 Ifi208-202ENSMUST00000169857 1767 ntAPPRIS P1 TSL 5 BASIC4.05□□□□□ -1.76
Use1Q9CQ56 Olfr235-206ENSMUST00000215407 2633 ntAPPRIS P1 TSL 5 BASIC4.05□□□□□ -1.76
Use1Q9CQ56 Olfr1242-202ENSMUST00000111540 2189 ntAPPRIS P1 TSL 3 BASIC4.05□□□□□ -1.76
Use1Q9CQ56 Dock11-202ENSMUST00000115264 1725 ntTSL 5 BASIC4.05□□□□□ -1.76
Use1Q9CQ56 Olfr970-203ENSMUST00000215922 1739 ntAPPRIS P1 TSL 3 BASIC4.05□□□□□ -1.76
Use1Q9CQ56 Tcrg-C2-201ENSMUST00000103561 914 ntAPPRIS P1 BASIC4.05□□□□□ -1.76
Use1Q9CQ56 Traj50-201ENSMUST00000103693 63 ntAPPRIS P1 BASIC4.05□□□□□ -1.76
Use1Q9CQ56 Gm11408-201ENSMUST00000117889 519 ntBASIC4.05□□□□□ -1.76
Use1Q9CQ56 Nectin3-204ENSMUST00000119941 529 ntTSL 3 BASIC4.05□□□□□ -1.76
Use1Q9CQ56 Gm14122-201ENSMUST00000122076 973 ntBASIC4.05□□□□□ -1.76
Use1Q9CQ56 Junos-205ENSMUST00000130684 614 ntTSL 3 BASIC4.05□□□□□ -1.76
Use1Q9CQ56 Olfr406-201ENSMUST00000133561 1101 ntAPPRIS P1 BASIC4.05□□□□□ -1.76
Use1Q9CQ56 Gm15591-201ENSMUST00000138539 627 ntTSL 5 BASIC4.05□□□□□ -1.76
Use1Q9CQ56 A630023P12Rik-204ENSMUST00000142879 524 ntTSL 3 BASIC4.05□□□□□ -1.76
Use1Q9CQ56 Gm12214-201ENSMUST00000151643 417 ntTSL 5 BASIC4.05□□□□□ -1.76
Use1Q9CQ56 Gm26001-201ENSMUST00000157989 103 ntBASIC4.05□□□□□ -1.76
Use1Q9CQ56 Cldn34c1-206ENSMUST00000169445 705 ntAPPRIS P3 TSL 5 BASIC4.05□□□□□ -1.76
Use1Q9CQ56 Svs4-201ENSMUST00000017142 731 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
Use1Q9CQ56 Gm23638-201ENSMUST00000175073 126 ntBASIC4.05□□□□□ -1.76
Use1Q9CQ56 Gm23158-201ENSMUST00000175076 126 ntBASIC4.05□□□□□ -1.76
Use1Q9CQ56 Gm22907-201ENSMUST00000175198 126 ntBASIC4.05□□□□□ -1.76
Use1Q9CQ56 Gm22625-201ENSMUST00000175382 126 ntBASIC4.05□□□□□ -1.76
Use1Q9CQ56 Gm22875-201ENSMUST00000175449 126 ntBASIC4.05□□□□□ -1.76
Use1Q9CQ56 Gm25197-201ENSMUST00000175516 126 ntBASIC4.05□□□□□ -1.76
Use1Q9CQ56 Vmn1r-ps148-201ENSMUST00000176775 455 ntBASIC4.05□□□□□ -1.76
Use1Q9CQ56 Gm27857-201ENSMUST00000176930 126 ntBASIC4.05□□□□□ -1.76
Use1Q9CQ56 Gm26268-201ENSMUST00000177685 126 ntBASIC4.05□□□□□ -1.76
Use1Q9CQ56 Gm23681-201ENSMUST00000178821 126 ntBASIC4.05□□□□□ -1.76
Use1Q9CQ56 Prl8a2-201ENSMUST00000018403 939 ntAPPRIS P3 TSL 1 (best) BASIC4.05□□□□□ -1.76
Use1Q9CQ56 Gm27940-201ENSMUST00000184449 98 ntBASIC4.05□□□□□ -1.76
Use1Q9CQ56 Gm21856-201ENSMUST00000187547 696 ntBASIC4.05□□□□□ -1.76
Use1Q9CQ56 Gm43774-201ENSMUST00000196327 878 ntBASIC4.05□□□□□ -1.76
Use1Q9CQ56 Gm36382-201ENSMUST00000198892 541 ntBASIC4.05□□□□□ -1.76
Use1Q9CQ56 Gm43116-201ENSMUST00000199789 195 ntBASIC4.05□□□□□ -1.76
Use1Q9CQ56 Gm43941-201ENSMUST00000203303 1073 ntBASIC4.05□□□□□ -1.76
Use1Q9CQ56 Gm5876-201ENSMUST00000203735 243 ntBASIC4.05□□□□□ -1.76
Use1Q9CQ56 Gm9616-201ENSMUST00000221154 781 ntBASIC4.05□□□□□ -1.76
Use1Q9CQ56 Muc16-201ENSMUST00000034653 1035 ntTSL 2 BASIC4.05□□□□□ -1.76
Use1Q9CQ56 Defb7-201ENSMUST00000047851 306 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
Use1Q9CQ56 Crem-202ENSMUST00000049942 953 ntTSL 2 BASIC4.05□□□□□ -1.76
Use1Q9CQ56 Olfr1176-201ENSMUST00000057439 949 ntAPPRIS P1 BASIC4.05□□□□□ -1.76
Use1Q9CQ56 Apoo-ps-201ENSMUST00000061241 586 ntBASIC4.05□□□□□ -1.76
Use1Q9CQ56 Olfr1495-201ENSMUST00000061669 1089 ntAPPRIS P1 BASIC4.05□□□□□ -1.76
Use1Q9CQ56 Vmn1r236-201ENSMUST00000066998 1121 ntAPPRIS P1 BASIC4.05□□□□□ -1.76
Use1Q9CQ56 Olfr845-201ENSMUST00000071259 942 ntAPPRIS P1 BASIC4.05□□□□□ -1.76
Use1Q9CQ56 Mir342-201ENSMUST00000083502 99 ntBASIC4.05□□□□□ -1.76
Use1Q9CQ56 Olfr1109-201ENSMUST00000099863 939 ntAPPRIS P1 BASIC4.05□□□□□ -1.76
Retrieved 100 of 76,532 protein–RNA pairs in 346.5 ms