Protein–RNA interactions for Protein: Q8K445

Clrn1, Clarin-1, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn1Q8K445 Gm11659-201ENSMUST00000137561 466 ntTSL 3 BASIC5.06□□□□□ -1.6
Clrn1Q8K445 1700061H18Rik-202ENSMUST00000147221 564 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
Clrn1Q8K445 Gm4724-203ENSMUST00000152941 1198 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
Clrn1Q8K445 Gm23225-201ENSMUST00000158121 114 ntBASIC5.06□□□□□ -1.6
Clrn1Q8K445 Bhlhe40-202ENSMUST00000163617 476 ntTSL 2 BASIC5.06□□□□□ -1.6
Clrn1Q8K445 Gm7271-201ENSMUST00000172369 519 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
Clrn1Q8K445 Mir3097-201ENSMUST00000175356 67 ntBASIC5.06□□□□□ -1.6
Clrn1Q8K445 Obox4-ps29-201ENSMUST00000175956 1134 ntBASIC5.06□□□□□ -1.6
Clrn1Q8K445 Gm21917-201ENSMUST00000177831 666 ntTSL 2 BASIC5.06□□□□□ -1.6
Clrn1Q8K445 Gm21860-201ENSMUST00000177893 309 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
Clrn1Q8K445 Gm21748-201ENSMUST00000179623 309 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
Clrn1Q8K445 Gm27313-201ENSMUST00000183500 142 ntBASIC5.06□□□□□ -1.6
Clrn1Q8K445 1700003C15Rik-201ENSMUST00000185360 1224 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
Clrn1Q8K445 Gm2914-201ENSMUST00000186120 328 ntBASIC5.06□□□□□ -1.6
Clrn1Q8K445 C530043A13Rik-201ENSMUST00000186453 550 ntTSL 3 BASIC5.06□□□□□ -1.6
Clrn1Q8K445 Gm29540-201ENSMUST00000188207 337 ntTSL 3 BASIC5.06□□□□□ -1.6
Clrn1Q8K445 Gm21256-202ENSMUST00000188881 932 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
Clrn1Q8K445 1700047L14Rik-201ENSMUST00000189659 511 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
Clrn1Q8K445 1700066N21Rik-201ENSMUST00000190123 783 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
Clrn1Q8K445 Gm29276-201ENSMUST00000190453 932 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
Clrn1Q8K445 Gm37353-201ENSMUST00000194497 313 ntBASIC5.06□□□□□ -1.6
Clrn1Q8K445 Gm18971-201ENSMUST00000197240 374 ntBASIC5.06□□□□□ -1.6
Clrn1Q8K445 Gm43685-201ENSMUST00000198876 706 ntTSL 3 BASIC5.06□□□□□ -1.6
Clrn1Q8K445 Gm38670-201ENSMUST00000199248 77 ntBASIC5.06□□□□□ -1.6
Clrn1Q8K445 Gm43522-202ENSMUST00000200185 442 ntTSL 3 BASIC5.06□□□□□ -1.6
Clrn1Q8K445 Gm43892-201ENSMUST00000204373 265 ntBASIC5.06□□□□□ -1.6
Clrn1Q8K445 Gm44074-201ENSMUST00000204562 337 ntBASIC5.06□□□□□ -1.6
Clrn1Q8K445 Gm45026-201ENSMUST00000205292 833 ntBASIC5.06□□□□□ -1.6
Clrn1Q8K445 Gm45169-201ENSMUST00000205717 639 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
Clrn1Q8K445 Gm44736-201ENSMUST00000205943 667 ntTSL 3 BASIC5.06□□□□□ -1.6
Clrn1Q8K445 Gm45366-201ENSMUST00000209828 384 ntBASIC5.06□□□□□ -1.6
Clrn1Q8K445 Gm45722-201ENSMUST00000213075 466 ntBASIC5.06□□□□□ -1.6
Clrn1Q8K445 Gm31698-202ENSMUST00000214385 527 ntTSL 5 BASIC5.06□□□□□ -1.6
Clrn1Q8K445 AC109212.1-201ENSMUST00000215561 427 ntBASIC5.06□□□□□ -1.6
Clrn1Q8K445 Gm18997-201ENSMUST00000216353 822 ntBASIC5.06□□□□□ -1.6
Clrn1Q8K445 AC160931.2-201ENSMUST00000221445 351 ntBASIC5.06□□□□□ -1.6
Clrn1Q8K445 AC102291.1-201ENSMUST00000227164 529 ntBASIC5.06□□□□□ -1.6
Clrn1Q8K445 Orm3-201ENSMUST00000006687 773 ntAPPRIS P1 TSL 5 BASIC5.06□□□□□ -1.6
Clrn1Q8K445 Olfr715b-201ENSMUST00000081044 948 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
Clrn1Q8K445 4930432M17Rik-201ENSMUST00000098646 525 ntAPPRIS P1 TSL 5 BASIC5.06□□□□□ -1.6
Clrn1Q8K445 Olfr1024-201ENSMUST00000099912 984 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
Clrn1Q8K445 Pate2-202ENSMUST00000118254 2215 ntAPPRIS P2 TSL 1 (best) BASIC5.06□□□□□ -1.6
Clrn1Q8K445 Tnrc6b-201ENSMUST00000067689 17332 ntAPPRIS P1 TSL 5 BASIC5.06□□□□□ -1.6
Clrn1Q8K445 Gm13023-201ENSMUST00000085144 1810 ntAPPRIS P3 TSL 1 (best) BASIC5.06□□□□□ -1.6
Clrn1Q8K445 Dcun1d1-212ENSMUST00000198389 3020 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
Clrn1Q8K445 Olfr448-202ENSMUST00000213952 3024 ntAPPRIS P1 TSL 5 BASIC5.06□□□□□ -1.6
Clrn1Q8K445 Fcrl5-203ENSMUST00000178261 1791 ntAPPRIS ALT2 TSL 5 BASIC5.06□□□□□ -1.6
Clrn1Q8K445 Fcrl5-201ENSMUST00000049926 1791 ntAPPRIS P4 TSL 5 BASIC5.06□□□□□ -1.6
Clrn1Q8K445 Zfp442-201ENSMUST00000109916 2922 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
Clrn1Q8K445 Zfp951-202ENSMUST00000186219 2904 ntAPPRIS P2 TSL 5 BASIC5.06□□□□□ -1.6
Clrn1Q8K445 4732416N19Rik-201ENSMUST00000203932 3479 ntBASIC5.06□□□□□ -1.6
Clrn1Q8K445 Vps41-201ENSMUST00000072961 3199 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
Clrn1Q8K445 Gm43386-201ENSMUST00000199654 4001 ntBASIC5.06□□□□□ -1.6
Clrn1Q8K445 Gm44708-201ENSMUST00000205580 2237 ntBASIC5.05□□□□□ -1.6
Clrn1Q8K445 Btbd35f24-201ENSMUST00000178080 1941 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
Clrn1Q8K445 Gm10256-201ENSMUST00000179404 1358 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
Clrn1Q8K445 Olfr221-202ENSMUST00000214071 3044 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
Clrn1Q8K445 Ireb2-201ENSMUST00000034843 5770 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
Clrn1Q8K445 Olfr1444-202ENSMUST00000213606 1872 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
Clrn1Q8K445 1500005C15Rik-201ENSMUST00000199867 2394 ntBASIC5.05□□□□□ -1.6
Clrn1Q8K445 Igkv4-92-201ENSMUST00000103332 351 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
Clrn1Q8K445 Glrb-202ENSMUST00000107743 1101 ntTSL 5 BASIC5.05□□□□□ -1.6
Clrn1Q8K445 Gm14220-201ENSMUST00000118114 449 ntBASIC5.05□□□□□ -1.6
Clrn1Q8K445 Gm14771-201ENSMUST00000118249 203 ntBASIC5.05□□□□□ -1.6
Clrn1Q8K445 Gm8430-201ENSMUST00000119780 471 ntBASIC5.05□□□□□ -1.6
Clrn1Q8K445 Gm14876-201ENSMUST00000120795 327 ntBASIC5.05□□□□□ -1.6
Clrn1Q8K445 Gm12256-201ENSMUST00000132394 446 ntTSL 3 BASIC5.05□□□□□ -1.6
Clrn1Q8K445 Gm7580-201ENSMUST00000132826 497 ntTSL 3 BASIC5.05□□□□□ -1.6
Clrn1Q8K445 Gm7855-201ENSMUST00000137737 687 ntBASIC5.05□□□□□ -1.6
Clrn1Q8K445 C030037F17Rik-201ENSMUST00000155211 406 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
Clrn1Q8K445 Gm13773-201ENSMUST00000156693 583 ntTSL 3 BASIC5.05□□□□□ -1.6
Clrn1Q8K445 Gm22236-201ENSMUST00000157093 106 ntBASIC5.05□□□□□ -1.6
Clrn1Q8K445 Gm24940-201ENSMUST00000158326 108 ntBASIC5.05□□□□□ -1.6
Clrn1Q8K445 Gm26172-201ENSMUST00000158421 134 ntBASIC5.05□□□□□ -1.6
Clrn1Q8K445 Vmn1r-ps14-201ENSMUST00000176859 913 ntBASIC5.05□□□□□ -1.6
Clrn1Q8K445 Gm20888-201ENSMUST00000178934 567 ntTSL 5 BASIC5.05□□□□□ -1.6
Clrn1Q8K445 Mir6417-201ENSMUST00000183815 116 ntBASIC5.05□□□□□ -1.6
Clrn1Q8K445 Gm19029-201ENSMUST00000189923 564 ntBASIC5.05□□□□□ -1.6
Clrn1Q8K445 Vmn1r82-202ENSMUST00000191002 918 ntBASIC5.05□□□□□ -1.6
Clrn1Q8K445 Gm34302-201ENSMUST00000192926 243 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
Clrn1Q8K445 Gm43513-201ENSMUST00000199779 1076 ntBASIC5.05□□□□□ -1.6
Clrn1Q8K445 Gm42604-201ENSMUST00000200077 801 ntTSL 3 BASIC5.05□□□□□ -1.6
Clrn1Q8K445 Gm44002-201ENSMUST00000205134 594 ntBASIC5.05□□□□□ -1.6
Clrn1Q8K445 Gm18587-201ENSMUST00000213736 841 ntBASIC5.05□□□□□ -1.6
Clrn1Q8K445 Olfr941-ps1-201ENSMUST00000215258 935 ntBASIC5.05□□□□□ -1.6
Clrn1Q8K445 Gm4921-201ENSMUST00000219804 992 ntBASIC5.05□□□□□ -1.6
Clrn1Q8K445 Gm11360-201ENSMUST00000221898 262 ntBASIC5.05□□□□□ -1.6
Clrn1Q8K445 Gm9202-201ENSMUST00000223036 437 ntBASIC5.05□□□□□ -1.6
Clrn1Q8K445 S100g-201ENSMUST00000038769 480 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
Clrn1Q8K445 Olfr967-201ENSMUST00000069561 933 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
Clrn1Q8K445 Olfr611-201ENSMUST00000078108 972 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
Clrn1Q8K445 Rps27a-ps2-201ENSMUST00000078766 467 ntBASIC5.05□□□□□ -1.6
Clrn1Q8K445 Gm25699-201ENSMUST00000082896 167 ntBASIC5.05□□□□□ -1.6
Clrn1Q8K445 Gm23511-201ENSMUST00000083084 164 ntBASIC5.05□□□□□ -1.6
Clrn1Q8K445 Vmn1r81-201ENSMUST00000086232 921 ntAPPRIS P2 BASIC5.05□□□□□ -1.6
Clrn1Q8K445 Olfr599-201ENSMUST00000098201 1050 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
Clrn1Q8K445 Olfr1131-202ENSMUST00000213302 1779 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
Clrn1Q8K445 Slc22a29-201ENSMUST00000113298 2271 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
Clrn1Q8K445 Epyc-202ENSMUST00000105285 2539 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
Clrn1Q8K445 2900079G21Rik-204ENSMUST00000163302 2764 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
Retrieved 100 of 76,532 protein–RNA pairs in 85 ms