Protein–RNA interactions for Protein: Q8BWR4

Usp40, Ubiquitin carboxyl-terminal hydrolase 40, mousemouse

Predictions only

Length 1,235 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp40Q8BWR4 Gm26490-201ENSMUST00000157879 140 ntBASIC6.71□□□□□ -1.34
Usp40Q8BWR4 Magea9-ps-202ENSMUST00000167328 899 ntBASIC6.71□□□□□ -1.34
Usp40Q8BWR4 Vdac2-208ENSMUST00000172727 1291 ntAPPRIS ALT2 TSL 5 BASIC6.71□□□□□ -1.34
Usp40Q8BWR4 Gm26962-201ENSMUST00000182545 265 ntTSL 3 BASIC6.71□□□□□ -1.34
Usp40Q8BWR4 Gm29276-201ENSMUST00000190453 932 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
Usp40Q8BWR4 4930590L20Rik-201ENSMUST00000193820 553 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
Usp40Q8BWR4 Gm43144-201ENSMUST00000198256 485 ntBASIC6.71□□□□□ -1.34
Usp40Q8BWR4 Gbp2-ps-201ENSMUST00000198870 1269 ntBASIC6.71□□□□□ -1.34
Usp40Q8BWR4 Gm44665-201ENSMUST00000205381 251 ntBASIC6.71□□□□□ -1.34
Usp40Q8BWR4 Gm34838-201ENSMUST00000209231 958 ntTSL 5 BASIC6.71□□□□□ -1.34
Usp40Q8BWR4 Gm45571-201ENSMUST00000209671 569 ntTSL 5 BASIC6.71□□□□□ -1.34
Usp40Q8BWR4 Fcf1-201ENSMUST00000021669 749 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
Usp40Q8BWR4 AC159472.1-201ENSMUST00000218178 463 ntBASIC6.71□□□□□ -1.34
Usp40Q8BWR4 Gm46369-201ENSMUST00000221577 401 ntBASIC6.71□□□□□ -1.34
Usp40Q8BWR4 AC155241.1-201ENSMUST00000222709 415 ntTSL 5 BASIC6.71□□□□□ -1.34
Usp40Q8BWR4 AC161252.2-201ENSMUST00000224978 374 ntBASIC6.71□□□□□ -1.34
Usp40Q8BWR4 CT025689.2-201ENSMUST00000224979 429 ntBASIC6.71□□□□□ -1.34
Usp40Q8BWR4 Rny3-201ENSMUST00000083011 102 ntBASIC6.71□□□□□ -1.34
Usp40Q8BWR4 Gm10800-201ENSMUST00000099683 660 ntAPPRIS P1 TSL 5 BASIC6.71□□□□□ -1.34
Usp40Q8BWR4 Slco1a1-201ENSMUST00000042119 3395 ntAPPRIS P2 TSL 1 (best) BASIC6.71□□□□□ -1.34
Usp40Q8BWR4 Zfp455-201ENSMUST00000117110 2556 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
Usp40Q8BWR4 Vmn1r21-201ENSMUST00000203310 1779 ntAPPRIS P1 TSL 2 BASIC6.71□□□□□ -1.34
Usp40Q8BWR4 Olfr402-202ENSMUST00000216722 3566 ntAPPRIS P1 TSL 5 BASIC6.71□□□□□ -1.34
Usp40Q8BWR4 Plcz1-201ENSMUST00000032356 2271 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
Usp40Q8BWR4 Vmn1r218-205ENSMUST00000227741 9624 ntAPPRIS ALT2 BASIC6.71□□□□□ -1.34
Usp40Q8BWR4 Gm38105-201ENSMUST00000192112 2621 ntBASIC6.71□□□□□ -1.34
Usp40Q8BWR4 Gm21244-202ENSMUST00000189201 3115 ntAPPRIS P1 TSL 5 BASIC6.71□□□□□ -1.34
Usp40Q8BWR4 Abcc9-203ENSMUST00000100827 7306 ntAPPRIS ALT2 TSL 1 (best) BASIC6.7□□□□□ -1.34
Usp40Q8BWR4 Vmn2r112-201ENSMUST00000097381 2574 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
Usp40Q8BWR4 Tbx22-204ENSMUST00000168403 1715 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
Usp40Q8BWR4 AC192616.2-201ENSMUST00000221482 3841 ntBASIC6.7□□□□□ -1.34
Usp40Q8BWR4 AC113031.7-201ENSMUST00000228609 1928 ntBASIC6.7□□□□□ -1.34
Usp40Q8BWR4 Ttc33-202ENSMUST00000081640 1583 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
Usp40Q8BWR4 Gm12814-201ENSMUST00000117091 846 ntBASIC6.7□□□□□ -1.34
Usp40Q8BWR4 Gm12112-201ENSMUST00000117772 231 ntBASIC6.7□□□□□ -1.34
Usp40Q8BWR4 Gm15659-201ENSMUST00000118881 341 ntBASIC6.7□□□□□ -1.34
Usp40Q8BWR4 Gm12433-201ENSMUST00000119659 255 ntBASIC6.7□□□□□ -1.34
Usp40Q8BWR4 Gm24444-201ENSMUST00000157244 308 ntBASIC6.7□□□□□ -1.34
Usp40Q8BWR4 Gm26098-201ENSMUST00000157247 288 ntBASIC6.7□□□□□ -1.34
Usp40Q8BWR4 Gm25923-201ENSMUST00000158312 138 ntBASIC6.7□□□□□ -1.34
Usp40Q8BWR4 Gm24931-201ENSMUST00000158324 107 ntBASIC6.7□□□□□ -1.34
Usp40Q8BWR4 Spink10-206ENSMUST00000162511 684 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
Usp40Q8BWR4 Znrd1as-203ENSMUST00000173814 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC6.7□□□□□ -1.34
Usp40Q8BWR4 Isx-202ENSMUST00000174427 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC6.7□□□□□ -1.34
Usp40Q8BWR4 Mir7j-201ENSMUST00000184427 122 ntBASIC6.7□□□□□ -1.34
Usp40Q8BWR4 Gm27235-201ENSMUST00000184431 903 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
Usp40Q8BWR4 Gm28997-201ENSMUST00000188759 429 ntBASIC6.7□□□□□ -1.34
Usp40Q8BWR4 Gm37190-201ENSMUST00000193580 688 ntTSL 5 BASIC6.7□□□□□ -1.34
Usp40Q8BWR4 Gm19057-201ENSMUST00000194329 1197 ntBASIC6.7□□□□□ -1.34
Usp40Q8BWR4 Gm43295-201ENSMUST00000201439 412 ntBASIC6.7□□□□□ -1.34
Usp40Q8BWR4 Gm45004-201ENSMUST00000205302 465 ntTSL 2 BASIC6.7□□□□□ -1.34
Usp40Q8BWR4 Gm45052-201ENSMUST00000206457 405 ntTSL 2 BASIC6.7□□□□□ -1.34
Usp40Q8BWR4 CT025617.1-201ENSMUST00000216487 725 ntTSL 5 BASIC6.7□□□□□ -1.34
Usp40Q8BWR4 Gm6863-201ENSMUST00000052882 636 ntBASIC6.7□□□□□ -1.34
Usp40Q8BWR4 Tgif2lx2-201ENSMUST00000072518 1030 ntAPPRIS P1 BASIC6.7□□□□□ -1.34
Usp40Q8BWR4 Tgif2lx1-201ENSMUST00000073857 1030 ntAPPRIS P1 BASIC6.7□□□□□ -1.34
Usp40Q8BWR4 Iqca-207ENSMUST00000212394 2574 ntAPPRIS ALT2 TSL 5 BASIC6.7□□□□□ -1.34
Usp40Q8BWR4 Tnip3-201ENSMUST00000114236 3769 ntAPPRIS P2 TSL 1 (best) BASIC6.7□□□□□ -1.34
Usp40Q8BWR4 Zscan4-ps2-201ENSMUST00000091440 2277 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
Usp40Q8BWR4 Lrriq3-202ENSMUST00000192383 1717 ntAPPRIS ALT2 TSL 1 (best) BASIC6.7□□□□□ -1.34
Usp40Q8BWR4 Olfr988-203ENSMUST00000215511 1906 ntAPPRIS P1 TSL 5 BASIC6.7□□□□□ -1.34
Usp40Q8BWR4 Olfr329-ps-203ENSMUST00000219448 4052 ntAPPRIS P2 TSL 5 BASIC6.7□□□□□ -1.34
Usp40Q8BWR4 Ptgs2-201ENSMUST00000035065 4453 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
Usp40Q8BWR4 Gm21269-201ENSMUST00000206521 12456 ntTSL 3 BASIC6.7□□□□□ -1.34
Usp40Q8BWR4 Olfr893-202ENSMUST00000211975 2924 ntAPPRIS ALT2 TSL 5 BASIC6.7□□□□□ -1.34
Usp40Q8BWR4 Wnk3-206ENSMUST00000184730 5253 ntAPPRIS ALT2 TSL 1 (best) BASIC6.7□□□□□ -1.34
Usp40Q8BWR4 Olfr109-202ENSMUST00000214668 5861 ntAPPRIS P1 TSL 5 BASIC6.7□□□□□ -1.34
Usp40Q8BWR4 AC121844.3-201ENSMUST00000219124 1785 ntBASIC6.69□□□□□ -1.34
Usp40Q8BWR4 Gm3867-202ENSMUST00000181639 2007 ntTSL 2 BASIC6.69□□□□□ -1.34
Usp40Q8BWR4 Vsig4-201ENSMUST00000050707 1432 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
Usp40Q8BWR4 Vmn1r175-202ENSMUST00000228383 2878 ntAPPRIS P1 BASIC6.69□□□□□ -1.34
Usp40Q8BWR4 Gm37606-201ENSMUST00000191816 3116 ntBASIC6.69□□□□□ -1.34
Usp40Q8BWR4 CT009734.1-201ENSMUST00000227657 1687 ntBASIC6.69□□□□□ -1.34
Usp40Q8BWR4 Vcan-203ENSMUST00000109546 12427 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
Usp40Q8BWR4 A630010A05Rik-201ENSMUST00000100165 684 ntAPPRIS ALT2 TSL 5 BASIC6.69□□□□□ -1.34
Usp40Q8BWR4 Gm11011-201ENSMUST00000109160 258 ntAPPRIS P1 TSL 5 BASIC6.69□□□□□ -1.34
Usp40Q8BWR4 Fam107b-205ENSMUST00000115055 515 ntAPPRIS P1 TSL 2 BASIC6.69□□□□□ -1.34
Usp40Q8BWR4 Gm14879-201ENSMUST00000117308 507 ntBASIC6.69□□□□□ -1.34
Usp40Q8BWR4 Gm14883-201ENSMUST00000120179 157 ntBASIC6.69□□□□□ -1.34
Usp40Q8BWR4 Gm11584-201ENSMUST00000120636 325 ntBASIC6.69□□□□□ -1.34
Usp40Q8BWR4 Gm13132-201ENSMUST00000121194 472 ntBASIC6.69□□□□□ -1.34
Usp40Q8BWR4 Gm12639-201ENSMUST00000121400 493 ntBASIC6.69□□□□□ -1.34
Usp40Q8BWR4 Gm16180-201ENSMUST00000128662 312 ntTSL 3 BASIC6.69□□□□□ -1.34
Usp40Q8BWR4 Gm12195-201ENSMUST00000144990 469 ntTSL 3 BASIC6.69□□□□□ -1.34
Usp40Q8BWR4 Gm22794-201ENSMUST00000157228 306 ntBASIC6.69□□□□□ -1.34
Usp40Q8BWR4 Kcne1-202ENSMUST00000166707 601 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
Usp40Q8BWR4 Gm22177-201ENSMUST00000175002 158 ntBASIC6.69□□□□□ -1.34
Usp40Q8BWR4 Gm26335-201ENSMUST00000178449 107 ntBASIC6.69□□□□□ -1.34
Usp40Q8BWR4 Gm27242-201ENSMUST00000184211 1151 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
Usp40Q8BWR4 Gm27160-201ENSMUST00000184837 199 ntBASIC6.69□□□□□ -1.34
Usp40Q8BWR4 1700044K03Rik-201ENSMUST00000190201 377 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
Usp40Q8BWR4 Tmem167-ps1-201ENSMUST00000191236 214 ntBASIC6.69□□□□□ -1.34
Usp40Q8BWR4 Mir5121-201ENSMUST00000198528 74 ntBASIC6.69□□□□□ -1.34
Usp40Q8BWR4 Olfr783-ps1-201ENSMUST00000205105 441 ntBASIC6.69□□□□□ -1.34
Usp40Q8BWR4 Gm4574-201ENSMUST00000207804 542 ntBASIC6.69□□□□□ -1.34
Usp40Q8BWR4 AC156504.1-201ENSMUST00000214608 157 ntBASIC6.69□□□□□ -1.34
Usp40Q8BWR4 AC150560.3-201ENSMUST00000227442 455 ntBASIC6.69□□□□□ -1.34
Usp40Q8BWR4 Prss37-201ENSMUST00000031967 1049 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
Usp40Q8BWR4 Mrgprb8-201ENSMUST00000056676 1123 ntAPPRIS P1 BASIC6.69□□□□□ -1.34
Usp40Q8BWR4 Gm10717-201ENSMUST00000075573 684 ntTSL 5 BASIC6.69□□□□□ -1.34
Retrieved 100 of 76,532 protein–RNA pairs in 78.8 ms