Protein–RNA interactions for Protein: Q78JW9

Ubfd1, Ubiquitin domain-containing protein UBFD1, mousemouse

Predictions only

Length 368 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubfd1Q78JW9 6820402A03Rik-201ENSMUST00000194648 2654 ntBASIC4.9□□□□□ -1.62
Ubfd1Q78JW9 Ktn1-219ENSMUST00000190182 3984 ntAPPRIS ALT2 TSL 5 BASIC4.9□□□□□ -1.62
Ubfd1Q78JW9 Axdnd1-211ENSMUST00000213088 3561 ntAPPRIS P2 TSL 5 BASIC4.9□□□□□ -1.62
Ubfd1Q78JW9 Slc22a30-201ENSMUST00000064507 1888 ntTSL 1 (best) BASIC4.9□□□□□ -1.62
Ubfd1Q78JW9 Gm3604-202ENSMUST00000187656 2310 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.62
Ubfd1Q78JW9 Hspd1-ps1-201ENSMUST00000203513 1670 ntBASIC4.9□□□□□ -1.62
Ubfd1Q78JW9 Zfp329-202ENSMUST00000108546 2577 ntTSL 1 (best) BASIC4.9□□□□□ -1.62
Ubfd1Q78JW9 Vmn2r-ps57-201ENSMUST00000173861 2598 ntBASIC4.9□□□□□ -1.62
Ubfd1Q78JW9 Gm44668-201ENSMUST00000207911 3265 ntBASIC4.9□□□□□ -1.62
Ubfd1Q78JW9 Gm5127-201ENSMUST00000101296 1455 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.62
Ubfd1Q78JW9 Olfr617-203ENSMUST00000216516 3083 ntAPPRIS P1 TSL 5 BASIC4.9□□□□□ -1.62
Ubfd1Q78JW9 Olfr1307-201ENSMUST00000099604 15582 ntAPPRIS P1 TSL 5 BASIC4.9□□□□□ -1.62
Ubfd1Q78JW9 Olfr1242-203ENSMUST00000143935 2406 ntAPPRIS P1 TSL 5 BASIC4.9□□□□□ -1.62
Ubfd1Q78JW9 Gm24117-201ENSMUST00000103973 133 ntBASIC4.9□□□□□ -1.63
Ubfd1Q78JW9 Gm25097-201ENSMUST00000104042 145 ntBASIC4.9□□□□□ -1.63
Ubfd1Q78JW9 Gm11898-201ENSMUST00000117161 385 ntBASIC4.9□□□□□ -1.63
Ubfd1Q78JW9 Gm11196-201ENSMUST00000119052 395 ntBASIC4.9□□□□□ -1.63
Ubfd1Q78JW9 Gm11822-201ENSMUST00000119177 415 ntBASIC4.9□□□□□ -1.63
Ubfd1Q78JW9 Gm26312-201ENSMUST00000157769 165 ntBASIC4.9□□□□□ -1.63
Ubfd1Q78JW9 Gm6395-201ENSMUST00000167639 691 ntBASIC4.9□□□□□ -1.63
Ubfd1Q78JW9 Gm8214-201ENSMUST00000172123 351 ntBASIC4.9□□□□□ -1.63
Ubfd1Q78JW9 Gm6155-201ENSMUST00000173735 341 ntBASIC4.9□□□□□ -1.63
Ubfd1Q78JW9 Gm5777-201ENSMUST00000177265 448 ntBASIC4.9□□□□□ -1.63
Ubfd1Q78JW9 Gm8807-201ENSMUST00000179328 492 ntBASIC4.9□□□□□ -1.63
Ubfd1Q78JW9 Gm6113-201ENSMUST00000180319 639 ntBASIC4.9□□□□□ -1.63
Ubfd1Q78JW9 Gm28113-201ENSMUST00000188280 229 ntBASIC4.9□□□□□ -1.63
Ubfd1Q78JW9 1700023F02Rik-203ENSMUST00000189619 473 ntTSL 3 BASIC4.9□□□□□ -1.63
Ubfd1Q78JW9 2610001A08Rik-201ENSMUST00000193315 867 ntBASIC4.9□□□□□ -1.63
Ubfd1Q78JW9 Gm38039-201ENSMUST00000195328 443 ntTSL 5 BASIC4.9□□□□□ -1.63
Ubfd1Q78JW9 Gm43524-201ENSMUST00000197278 298 ntBASIC4.9□□□□□ -1.63
Ubfd1Q78JW9 Gm33758-201ENSMUST00000199230 407 ntTSL 3 BASIC4.9□□□□□ -1.63
Ubfd1Q78JW9 Gm45096-201ENSMUST00000205833 427 ntTSL 3 BASIC4.9□□□□□ -1.63
Ubfd1Q78JW9 Gm32817-201ENSMUST00000210007 689 ntTSL 5 BASIC4.9□□□□□ -1.63
Ubfd1Q78JW9 Vmn1r-ps50-201ENSMUST00000216908 453 ntBASIC4.9□□□□□ -1.63
Ubfd1Q78JW9 AC153516.1-201ENSMUST00000217955 779 ntBASIC4.9□□□□□ -1.63
Ubfd1Q78JW9 Gm6906-201ENSMUST00000218014 569 ntBASIC4.9□□□□□ -1.63
Ubfd1Q78JW9 AC159244.1-201ENSMUST00000220964 594 ntBASIC4.9□□□□□ -1.63
Ubfd1Q78JW9 AC163721.1-201ENSMUST00000222669 394 ntTSL 3 BASIC4.9□□□□□ -1.63
Ubfd1Q78JW9 CT009550.5-201ENSMUST00000226286 382 ntBASIC4.9□□□□□ -1.63
Ubfd1Q78JW9 Gm5215-201ENSMUST00000054380 405 ntBASIC4.9□□□□□ -1.63
Ubfd1Q78JW9 Olfr622-201ENSMUST00000058744 1105 ntAPPRIS P1 BASIC4.9□□□□□ -1.63
Ubfd1Q78JW9 Olfr729-201ENSMUST00000061020 972 ntAPPRIS P1 BASIC4.9□□□□□ -1.63
Ubfd1Q78JW9 Gm33609-201ENSMUST00000198559 2694 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
Ubfd1Q78JW9 Gm13961-201ENSMUST00000119282 4772 ntBASIC4.9□□□□□ -1.63
Ubfd1Q78JW9 Obscn-202ENSMUST00000047441 24175 ntAPPRIS P1 TSL 5 BASIC4.9□□□□□ -1.63
Ubfd1Q78JW9 Samd3-202ENSMUST00000164660 2620 ntAPPRIS ALT2 TSL 1 (best) BASIC4.9□□□□□ -1.63
Ubfd1Q78JW9 Samd3-203ENSMUST00000218301 2620 ntAPPRIS ALT2 TSL 1 (best) BASIC4.9□□□□□ -1.63
Ubfd1Q78JW9 Fndc3c1-201ENSMUST00000039447 4859 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
Ubfd1Q78JW9 Tmem72-201ENSMUST00000056623 17152 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
Ubfd1Q78JW9 Olfr344-202ENSMUST00000215879 7675 ntAPPRIS P1 TSL 5 BASIC4.9□□□□□ -1.63
Ubfd1Q78JW9 Chl1-203ENSMUST00000203830 4152 ntAPPRIS P2 TSL 1 (best) BASIC4.9□□□□□ -1.63
Ubfd1Q78JW9 Gm43281-201ENSMUST00000202522 2704 ntBASIC4.89□□□□□ -1.63
Ubfd1Q78JW9 Pnpla8-201ENSMUST00000043082 13507 ntAPPRIS P2 TSL 1 (best) BASIC4.89□□□□□ -1.63
Ubfd1Q78JW9 Olfr684-203ENSMUST00000215744 3084 ntAPPRIS P1 TSL 5 BASIC4.89□□□□□ -1.63
Ubfd1Q78JW9 Olfr1200-202ENSMUST00000217588 4996 ntAPPRIS P1 TSL 5 BASIC4.89□□□□□ -1.63
Ubfd1Q78JW9 Ccr9-204ENSMUST00000168910 2888 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
Ubfd1Q78JW9 Gm43024-201ENSMUST00000196770 4352 ntBASIC4.89□□□□□ -1.63
Ubfd1Q78JW9 Gm23431-201ENSMUST00000104006 107 ntBASIC4.89□□□□□ -1.63
Ubfd1Q78JW9 Gm15297-201ENSMUST00000117795 290 ntBASIC4.89□□□□□ -1.63
Ubfd1Q78JW9 Gm5384-201ENSMUST00000120313 463 ntBASIC4.89□□□□□ -1.63
Ubfd1Q78JW9 Gm11358-201ENSMUST00000122310 373 ntBASIC4.89□□□□□ -1.63
Ubfd1Q78JW9 Gm23115-201ENSMUST00000158480 108 ntBASIC4.89□□□□□ -1.63
Ubfd1Q78JW9 Gm10267-202ENSMUST00000181652 341 ntAPPRIS P2 TSL 5 BASIC4.89□□□□□ -1.63
Ubfd1Q78JW9 Gm27528-201ENSMUST00000183544 205 ntBASIC4.89□□□□□ -1.63
Ubfd1Q78JW9 Gm37468-201ENSMUST00000194767 854 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
Ubfd1Q78JW9 Gm36954-201ENSMUST00000195362 363 ntBASIC4.89□□□□□ -1.63
Ubfd1Q78JW9 1700052H01Rik-202ENSMUST00000196973 429 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
Ubfd1Q78JW9 Trav3-2-201ENSMUST00000198999 305 ntBASIC4.89□□□□□ -1.63
Ubfd1Q78JW9 Gm43384-201ENSMUST00000200569 637 ntBASIC4.89□□□□□ -1.63
Ubfd1Q78JW9 4930425K10Rik-201ENSMUST00000201190 745 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
Ubfd1Q78JW9 Gm8035-201ENSMUST00000204625 687 ntBASIC4.89□□□□□ -1.63
Ubfd1Q78JW9 Gm2607-201ENSMUST00000212389 627 ntBASIC4.89□□□□□ -1.63
Ubfd1Q78JW9 Olfr1139-ps1-201ENSMUST00000217634 168 ntBASIC4.89□□□□□ -1.63
Ubfd1Q78JW9 Fam228b-208ENSMUST00000219898 288 ntAPPRIS ALT2 TSL 3 BASIC4.89□□□□□ -1.63
Ubfd1Q78JW9 AC158803.3-201ENSMUST00000220024 211 ntBASIC4.89□□□□□ -1.63
Ubfd1Q78JW9 Gm9628-201ENSMUST00000222169 725 ntBASIC4.89□□□□□ -1.63
Ubfd1Q78JW9 Gm26861-206ENSMUST00000222633 1039 ntTSL 5 BASIC4.89□□□□□ -1.63
Ubfd1Q78JW9 Lrrc69-201ENSMUST00000023917 1242 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
Ubfd1Q78JW9 Gm5045-201ENSMUST00000027054 810 ntBASIC4.89□□□□□ -1.63
Ubfd1Q78JW9 Olfr623-201ENSMUST00000068531 1075 ntAPPRIS P1 BASIC4.89□□□□□ -1.63
Ubfd1Q78JW9 Tas2r106-201ENSMUST00000076756 927 ntAPPRIS P1 BASIC4.89□□□□□ -1.63
Ubfd1Q78JW9 Olfr1136-201ENSMUST00000077471 1067 ntAPPRIS P1 BASIC4.89□□□□□ -1.63
Ubfd1Q78JW9 Gm22220-201ENSMUST00000082671 149 ntBASIC4.89□□□□□ -1.63
Ubfd1Q78JW9 Olfr1101-201ENSMUST00000099870 933 ntAPPRIS P1 BASIC4.89□□□□□ -1.63
Ubfd1Q78JW9 Vmn1r171-210ENSMUST00000228484 2421 ntAPPRIS ALT2 BASIC4.89□□□□□ -1.63
Ubfd1Q78JW9 Adgrv1-201ENSMUST00000095585 19338 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
Ubfd1Q78JW9 Vmn1r185-205ENSMUST00000227461 5318 ntAPPRIS P1 BASIC4.89□□□□□ -1.63
Ubfd1Q78JW9 Far2-202ENSMUST00000111607 3395 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
Ubfd1Q78JW9 Mapk8-203ENSMUST00000111943 1310 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
Ubfd1Q78JW9 Sri-202ENSMUST00000088786 2504 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
Ubfd1Q78JW9 Olfr1406-203ENSMUST00000215878 3149 ntAPPRIS P1 TSL 5 BASIC4.89□□□□□ -1.63
Ubfd1Q78JW9 Olfr1043-202ENSMUST00000213886 1675 ntAPPRIS P1 TSL 5 BASIC4.89□□□□□ -1.63
Ubfd1Q78JW9 1700017N19Rik-201ENSMUST00000041162 1691 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
Ubfd1Q78JW9 Olfr736-203ENSMUST00000213755 2338 ntAPPRIS P1 TSL 5 BASIC4.89□□□□□ -1.63
Ubfd1Q78JW9 Ankar-202ENSMUST00000211837 4543 ntAPPRIS ALT2 TSL 1 (best) BASIC4.89□□□□□ -1.63
Ubfd1Q78JW9 P2ry12-202ENSMUST00000170388 2101 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
Ubfd1Q78JW9 Gm5715-201ENSMUST00000196854 1465 ntBASIC4.88□□□□□ -1.63
Ubfd1Q78JW9 Olfr516-202ENSMUST00000216092 1493 ntAPPRIS P1 TSL 5 BASIC4.88□□□□□ -1.63
Ubfd1Q78JW9 Vmn1r210-202ENSMUST00000226180 3116 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
Ubfd1Q78JW9 Tnfrsf26-201ENSMUST00000055723 3107 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
Retrieved 100 of 76,532 protein–RNA pairs in 65.9 ms