Protein–RNA interactions for Protein: Q6NSQ5

Sp140, Sp140 nuclear body protein, mousemouse

Predictions only

Length 534 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sp140Q6NSQ5 1700091H14Rik-202ENSMUST00000185725 1388 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
Sp140Q6NSQ5 A530083M17Rik-201ENSMUST00000199877 3376 ntBASIC5.08□□□□□ -1.6
Sp140Q6NSQ5 A330087D11Rik-201ENSMUST00000187265 1334 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
Sp140Q6NSQ5 Sdr16c6-202ENSMUST00000108383 1923 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
Sp140Q6NSQ5 Gm25758-201ENSMUST00000103987 129 ntBASIC5.08□□□□□ -1.6
Sp140Q6NSQ5 Fam107b-205ENSMUST00000115055 515 ntAPPRIS P1 TSL 2 BASIC5.08□□□□□ -1.6
Sp140Q6NSQ5 Gm16400-201ENSMUST00000116523 1029 ntBASIC5.08□□□□□ -1.6
Sp140Q6NSQ5 Gm12423-201ENSMUST00000118334 135 ntBASIC5.08□□□□□ -1.6
Sp140Q6NSQ5 Gm15094-201ENSMUST00000118394 1131 ntBASIC5.08□□□□□ -1.6
Sp140Q6NSQ5 Gm15981-201ENSMUST00000119196 457 ntBASIC5.08□□□□□ -1.6
Sp140Q6NSQ5 Gm11481-201ENSMUST00000120069 255 ntBASIC5.08□□□□□ -1.6
Sp140Q6NSQ5 Gm12103-201ENSMUST00000121892 362 ntBASIC5.08□□□□□ -1.6
Sp140Q6NSQ5 Gm14162-201ENSMUST00000121985 601 ntBASIC5.08□□□□□ -1.6
Sp140Q6NSQ5 Gm24371-201ENSMUST00000122662 267 ntBASIC5.08□□□□□ -1.6
Sp140Q6NSQ5 Gm11381-201ENSMUST00000138574 420 ntTSL 5 BASIC5.08□□□□□ -1.6
Sp140Q6NSQ5 Gm23965-201ENSMUST00000157969 142 ntBASIC5.08□□□□□ -1.6
Sp140Q6NSQ5 Gm15810-201ENSMUST00000160241 681 ntTSL 3 BASIC5.08□□□□□ -1.6
Sp140Q6NSQ5 Hsd11b1-203ENSMUST00000160929 1256 ntAPPRIS ALT2 TSL 1 (best) BASIC5.08□□□□□ -1.6
Sp140Q6NSQ5 Sult2a4-202ENSMUST00000165167 964 ntAPPRIS P2 TSL 5 BASIC5.08□□□□□ -1.6
Sp140Q6NSQ5 Plgrkt-201ENSMUST00000016639 1012 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
Sp140Q6NSQ5 Olfr758-ps1-201ENSMUST00000173901 841 ntBASIC5.08□□□□□ -1.6
Sp140Q6NSQ5 Gm12002-203ENSMUST00000174550 923 ntTSL 3 BASIC5.08□□□□□ -1.6
Sp140Q6NSQ5 Gm20795-201ENSMUST00000178528 699 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
Sp140Q6NSQ5 Gm29159-201ENSMUST00000187969 379 ntBASIC5.08□□□□□ -1.6
Sp140Q6NSQ5 Mrgprb9-ps-201ENSMUST00000188739 892 ntBASIC5.08□□□□□ -1.6
Sp140Q6NSQ5 Gm7967-203ENSMUST00000191409 1049 ntTSL 5 BASIC5.08□□□□□ -1.6
Sp140Q6NSQ5 Olfr258-ps1-201ENSMUST00000192471 891 ntBASIC5.08□□□□□ -1.6
Sp140Q6NSQ5 Gm3933-201ENSMUST00000195391 439 ntBASIC5.08□□□□□ -1.6
Sp140Q6NSQ5 Gm42579-201ENSMUST00000200512 734 ntBASIC5.08□□□□□ -1.6
Sp140Q6NSQ5 Gng12-208ENSMUST00000204511 739 ntTSL 5 BASIC5.08□□□□□ -1.6
Sp140Q6NSQ5 Rpl26-ps1-201ENSMUST00000213139 426 ntBASIC5.08□□□□□ -1.6
Sp140Q6NSQ5 AC116465.1-201ENSMUST00000220324 235 ntBASIC5.08□□□□□ -1.6
Sp140Q6NSQ5 AC156790.3-201ENSMUST00000226200 254 ntBASIC5.08□□□□□ -1.6
Sp140Q6NSQ5 Rps4x-201ENSMUST00000033683 975 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
Sp140Q6NSQ5 Vmn1r75-201ENSMUST00000057229 918 ntAPPRIS P2 BASIC5.08□□□□□ -1.6
Sp140Q6NSQ5 Gm24525-201ENSMUST00000082917 151 ntBASIC5.08□□□□□ -1.6
Sp140Q6NSQ5 n-R5s170-201ENSMUST00000083726 113 ntBASIC5.08□□□□□ -1.6
Sp140Q6NSQ5 Olfr1297-201ENSMUST00000099612 939 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
Sp140Q6NSQ5 Olfr1141-201ENSMUST00000099846 936 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
Sp140Q6NSQ5 Vmn2r89-201ENSMUST00000159611 2942 ntAPPRIS P4 TSL 1 (best) BASIC5.08□□□□□ -1.6
Sp140Q6NSQ5 Gm45129-201ENSMUST00000208444 2224 ntBASIC5.08□□□□□ -1.6
Sp140Q6NSQ5 Pnpla8-204ENSMUST00000143771 2974 ntTSL 5 BASIC5.07□□□□□ -1.6
Sp140Q6NSQ5 Olfr685-203ENSMUST00000214712 3326 ntAPPRIS ALT2 TSL 5 BASIC5.07□□□□□ -1.6
Sp140Q6NSQ5 AC139218.1-201ENSMUST00000228215 4287 ntBASIC5.07□□□□□ -1.6
Sp140Q6NSQ5 Gm4541-201ENSMUST00000208901 1848 ntBASIC5.07□□□□□ -1.6
Sp140Q6NSQ5 Gm37363-201ENSMUST00000192336 2233 ntBASIC5.07□□□□□ -1.6
Sp140Q6NSQ5 Olfr1300-ps1-201ENSMUST00000208175 2235 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
Sp140Q6NSQ5 Gm18954-201ENSMUST00000222200 1792 ntBASIC5.07□□□□□ -1.6
Sp140Q6NSQ5 AC124446.1-201ENSMUST00000221027 2644 ntBASIC5.07□□□□□ -1.6
Sp140Q6NSQ5 Gm15581-201ENSMUST00000131334 5640 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
Sp140Q6NSQ5 Tas2r122-201ENSMUST00000105077 930 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
Sp140Q6NSQ5 Gm23987-201ENSMUST00000117039 129 ntBASIC5.07□□□□□ -1.6
Sp140Q6NSQ5 Ccnb2-ps-201ENSMUST00000118290 623 ntBASIC5.07□□□□□ -1.6
Sp140Q6NSQ5 Gm15126-201ENSMUST00000118631 833 ntBASIC5.07□□□□□ -1.6
Sp140Q6NSQ5 Gm13435-201ENSMUST00000120111 1023 ntBASIC5.07□□□□□ -1.6
Sp140Q6NSQ5 Gm13488-201ENSMUST00000120419 179 ntBASIC5.07□□□□□ -1.6
Sp140Q6NSQ5 Gm12880-201ENSMUST00000120652 494 ntBASIC5.07□□□□□ -1.6
Sp140Q6NSQ5 n-R5s24-201ENSMUST00000122518 117 ntBASIC5.07□□□□□ -1.6
Sp140Q6NSQ5 4930558G05Rik-201ENSMUST00000122848 494 ntTSL 5 BASIC5.07□□□□□ -1.6
Sp140Q6NSQ5 Gm13470-201ENSMUST00000123911 421 ntTSL 2 BASIC5.07□□□□□ -1.6
Sp140Q6NSQ5 Gm11967-201ENSMUST00000135132 480 ntTSL 2 BASIC5.07□□□□□ -1.6
Sp140Q6NSQ5 Gm12082-201ENSMUST00000138164 600 ntTSL 3 BASIC5.07□□□□□ -1.6
Sp140Q6NSQ5 Zfp965-204ENSMUST00000143490 297 ntTSL 5 BASIC5.07□□□□□ -1.6
Sp140Q6NSQ5 Gm12602-202ENSMUST00000154352 707 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
Sp140Q6NSQ5 Gm24860-201ENSMUST00000158457 276 ntBASIC5.07□□□□□ -1.6
Sp140Q6NSQ5 Gm22261-201ENSMUST00000158691 324 ntBASIC5.07□□□□□ -1.6
Sp140Q6NSQ5 Gm23025-201ENSMUST00000158769 111 ntBASIC5.07□□□□□ -1.6
Sp140Q6NSQ5 Gm17521-201ENSMUST00000165345 468 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
Sp140Q6NSQ5 Vmn1r115-201ENSMUST00000169374 888 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
Sp140Q6NSQ5 Rps24-202ENSMUST00000169826 519 ntAPPRIS ALT1 TSL 1 (best) BASIC5.07□□□□□ -1.6
Sp140Q6NSQ5 Mir6921-201ENSMUST00000183719 80 ntBASIC5.07□□□□□ -1.6
Sp140Q6NSQ5 Mir7687-201ENSMUST00000184722 59 ntBASIC5.07□□□□□ -1.6
Sp140Q6NSQ5 Gm20897-201ENSMUST00000185240 923 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
Sp140Q6NSQ5 Gm20883-201ENSMUST00000185245 922 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
Sp140Q6NSQ5 Gm20916-202ENSMUST00000185338 923 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
Sp140Q6NSQ5 Gm28897-201ENSMUST00000185340 923 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
Sp140Q6NSQ5 Gm20736-202ENSMUST00000185550 923 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
Sp140Q6NSQ5 Gm20835-201ENSMUST00000185565 923 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
Sp140Q6NSQ5 Gm29564-201ENSMUST00000185575 923 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
Sp140Q6NSQ5 Gm29299-201ENSMUST00000185609 923 ntBASIC5.07□□□□□ -1.6
Sp140Q6NSQ5 Gm21317-201ENSMUST00000185636 923 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
Sp140Q6NSQ5 Gm21858-202ENSMUST00000185713 923 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
Sp140Q6NSQ5 Gm28553-201ENSMUST00000185924 923 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
Sp140Q6NSQ5 Gm20908-201ENSMUST00000186004 922 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
Sp140Q6NSQ5 Gm21409-201ENSMUST00000186110 923 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
Sp140Q6NSQ5 Gm28998-201ENSMUST00000186194 919 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
Sp140Q6NSQ5 Gm20906-201ENSMUST00000186493 923 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
Sp140Q6NSQ5 Gm20929-201ENSMUST00000186578 923 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
Sp140Q6NSQ5 Gm20824-201ENSMUST00000186739 919 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
Sp140Q6NSQ5 Gm28863-201ENSMUST00000186888 431 ntTSL 3 BASIC5.07□□□□□ -1.6
Sp140Q6NSQ5 Gm21518-202ENSMUST00000186938 922 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
Sp140Q6NSQ5 Gm20855-202ENSMUST00000186996 924 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
Sp140Q6NSQ5 Gm20911-201ENSMUST00000187135 924 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
Sp140Q6NSQ5 Gm28102-201ENSMUST00000187146 924 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
Sp140Q6NSQ5 Gm28827-201ENSMUST00000187165 923 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
Sp140Q6NSQ5 Gm20931-202ENSMUST00000187293 922 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
Sp140Q6NSQ5 Gm21760-202ENSMUST00000187433 923 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
Sp140Q6NSQ5 Gm20920-201ENSMUST00000187477 922 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
Sp140Q6NSQ5 Gm21627-201ENSMUST00000187768 918 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
Sp140Q6NSQ5 Gm20850-201ENSMUST00000188672 924 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
Retrieved 100 of 76,532 protein–RNA pairs in 89 ms