Protein–RNA interactions for Protein: Q60649

Clpb, Caseinolytic peptidase B protein homolog, mousemouse

Predictions only

Length 677 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClpbQ60649 Obox4-ps20-201ENSMUST00000179591 1140 ntBASIC4.68□□□□□ -1.66
ClpbQ60649 Spin2e-201ENSMUST00000179716 705 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
ClpbQ60649 Obox4-ps21-201ENSMUST00000179856 1140 ntBASIC4.68□□□□□ -1.66
ClpbQ60649 Gm21232-201ENSMUST00000182187 1006 ntBASIC4.68□□□□□ -1.66
ClpbQ60649 Gm9320-201ENSMUST00000184151 473 ntBASIC4.68□□□□□ -1.66
ClpbQ60649 Ikzf2-209ENSMUST00000191262 1146 ntTSL 5 BASIC4.68□□□□□ -1.66
ClpbQ60649 Gm43619-201ENSMUST00000197267 914 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
ClpbQ60649 Gm40323-201ENSMUST00000200649 645 ntTSL 2 BASIC4.68□□□□□ -1.66
ClpbQ60649 Gm42761-201ENSMUST00000201899 738 ntTSL 3 BASIC4.68□□□□□ -1.66
ClpbQ60649 Gm42666-201ENSMUST00000201954 152 ntBASIC4.68□□□□□ -1.66
ClpbQ60649 Gm35216-201ENSMUST00000203777 433 ntTSL 2 BASIC4.68□□□□□ -1.66
ClpbQ60649 Gm44006-201ENSMUST00000204273 396 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
ClpbQ60649 Gm43919-201ENSMUST00000204303 364 ntBASIC4.68□□□□□ -1.66
ClpbQ60649 Olfr1498-ps1-201ENSMUST00000208721 991 ntBASIC4.68□□□□□ -1.66
ClpbQ60649 Supt4b-201ENSMUST00000214434 351 ntBASIC4.68□□□□□ -1.66
ClpbQ60649 AC161256.1-201ENSMUST00000217312 213 ntBASIC4.68□□□□□ -1.66
ClpbQ60649 AC122210.1-201ENSMUST00000217923 675 ntTSL 3 BASIC4.68□□□□□ -1.66
ClpbQ60649 AC142191.1-201ENSMUST00000219217 699 ntTSL 5 BASIC4.68□□□□□ -1.66
ClpbQ60649 AC161269.1-201ENSMUST00000228426 318 ntBASIC4.68□□□□□ -1.66
ClpbQ60649 Olfr1020-201ENSMUST00000055840 1079 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
ClpbQ60649 Olfr938-201ENSMUST00000056499 1190 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
ClpbQ60649 Olfr850-201ENSMUST00000077347 948 ntAPPRIS P2 BASIC4.68□□□□□ -1.66
ClpbQ60649 D130040H23Rik-201ENSMUST00000078257 1218 ntTSL 2 BASIC4.68□□□□□ -1.66
ClpbQ60649 Mir342-201ENSMUST00000083502 99 ntBASIC4.68□□□□□ -1.66
ClpbQ60649 Mir338-201ENSMUST00000083666 98 ntBASIC4.68□□□□□ -1.66
ClpbQ60649 C87499-203ENSMUST00000107143 1431 ntAPPRIS ALT2 TSL 5 BASIC4.68□□□□□ -1.66
ClpbQ60649 Clk4-202ENSMUST00000109111 1427 ntTSL 2 BASIC4.68□□□□□ -1.66
ClpbQ60649 Olfr823-202ENSMUST00000213145 1431 ntAPPRIS P1 TSL 5 BASIC4.68□□□□□ -1.66
ClpbQ60649 Gm11674-201ENSMUST00000124855 3005 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
ClpbQ60649 Gm38212-201ENSMUST00000194081 2756 ntBASIC4.68□□□□□ -1.66
ClpbQ60649 Olfr1389-202ENSMUST00000216641 3707 ntAPPRIS P1 TSL 5 BASIC4.68□□□□□ -1.66
ClpbQ60649 Pou2f1-208ENSMUST00000160260 13022 ntAPPRIS ALT2 TSL 1 (best) BASIC4.67□□□□□ -1.66
ClpbQ60649 Vmn2r77-201ENSMUST00000164996 2565 ntAPPRIS P1 TSL 5 BASIC4.67□□□□□ -1.66
ClpbQ60649 Gm10521-201ENSMUST00000097466 2574 ntAPPRIS P1 BASIC4.67□□□□□ -1.66
ClpbQ60649 Olfr459-202ENSMUST00000214752 3715 ntAPPRIS P1 TSL 5 BASIC4.67□□□□□ -1.66
ClpbQ60649 Gm20756-201ENSMUST00000201080 1595 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
ClpbQ60649 AC102431.1-201ENSMUST00000223773 1449 ntBASIC4.67□□□□□ -1.66
ClpbQ60649 Gm45129-201ENSMUST00000208444 2224 ntBASIC4.67□□□□□ -1.66
ClpbQ60649 Gm1330-202ENSMUST00000109942 555 ntAPPRIS ALT2 TSL 5 BASIC4.67□□□□□ -1.66
ClpbQ60649 Gm11409-201ENSMUST00000118621 403 ntBASIC4.67□□□□□ -1.66
ClpbQ60649 Gm12734-201ENSMUST00000120228 948 ntBASIC4.67□□□□□ -1.66
ClpbQ60649 Gm11909-201ENSMUST00000121424 759 ntBASIC4.67□□□□□ -1.66
ClpbQ60649 Gm12885-201ENSMUST00000122246 328 ntBASIC4.67□□□□□ -1.66
ClpbQ60649 Gm12854-201ENSMUST00000128518 297 ntBASIC4.67□□□□□ -1.66
ClpbQ60649 Gm14003-201ENSMUST00000130919 313 ntTSL 3 BASIC4.67□□□□□ -1.66
ClpbQ60649 Gm13773-201ENSMUST00000156693 583 ntTSL 3 BASIC4.67□□□□□ -1.66
ClpbQ60649 Gm22870-201ENSMUST00000157501 112 ntBASIC4.67□□□□□ -1.66
ClpbQ60649 Gm23034-201ENSMUST00000158001 147 ntBASIC4.67□□□□□ -1.66
ClpbQ60649 Defa27-201ENSMUST00000167683 282 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
ClpbQ60649 Gm25944-201ENSMUST00000178758 94 ntBASIC4.67□□□□□ -1.66
ClpbQ60649 Cox6b2-202ENSMUST00000182048 465 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
ClpbQ60649 Gm26993-201ENSMUST00000182766 789 ntBASIC4.67□□□□□ -1.66
ClpbQ60649 Mir6986-201ENSMUST00000184483 58 ntBASIC4.67□□□□□ -1.66
ClpbQ60649 Gm21617-201ENSMUST00000188297 691 ntBASIC4.67□□□□□ -1.66
ClpbQ60649 Gm37578-201ENSMUST00000192256 1177 ntBASIC4.67□□□□□ -1.66
ClpbQ60649 Gm37987-201ENSMUST00000194999 825 ntBASIC4.67□□□□□ -1.66
ClpbQ60649 Gm5842-201ENSMUST00000195073 622 ntBASIC4.67□□□□□ -1.66
ClpbQ60649 AL645522.1-201ENSMUST00000197692 104 ntBASIC4.67□□□□□ -1.66
ClpbQ60649 Gm44261-201ENSMUST00000203337 209 ntBASIC4.67□□□□□ -1.66
ClpbQ60649 Gm8319-201ENSMUST00000205708 641 ntBASIC4.67□□□□□ -1.66
ClpbQ60649 Gm45639-201ENSMUST00000211205 710 ntTSL 5 BASIC4.67□□□□□ -1.66
ClpbQ60649 Gm7333-201ENSMUST00000213449 1060 ntBASIC4.67□□□□□ -1.66
ClpbQ60649 AC131720.3-201ENSMUST00000219113 275 ntBASIC4.67□□□□□ -1.66
ClpbQ60649 Gm6171-201ENSMUST00000220760 645 ntBASIC4.67□□□□□ -1.66
ClpbQ60649 AC134468.2-201ENSMUST00000222549 672 ntBASIC4.67□□□□□ -1.66
ClpbQ60649 Gm5471-201ENSMUST00000072732 337 ntBASIC4.67□□□□□ -1.66
ClpbQ60649 Gm14393-201ENSMUST00000072895 625 ntAPPRIS P1 TSL 2 BASIC4.67□□□□□ -1.66
ClpbQ60649 Gm7665-201ENSMUST00000076710 297 ntBASIC4.67□□□□□ -1.66
ClpbQ60649 Gm22155-201ENSMUST00000083836 162 ntBASIC4.67□□□□□ -1.66
ClpbQ60649 n-R5s3-201ENSMUST00000083879 112 ntBASIC4.67□□□□□ -1.66
ClpbQ60649 Gm10356-201ENSMUST00000097152 1258 ntBASIC4.67□□□□□ -1.66
ClpbQ60649 Pde1a-204ENSMUST00000102653 2439 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
ClpbQ60649 Gm43882-201ENSMUST00000204871 2264 ntBASIC4.67□□□□□ -1.66
ClpbQ60649 Olfr1034-201ENSMUST00000213496 4882 ntAPPRIS P1 BASIC4.67□□□□□ -1.66
ClpbQ60649 Gm43201-201ENSMUST00000195925 3416 ntBASIC4.67□□□□□ -1.66
ClpbQ60649 A530064N14Rik-201ENSMUST00000195338 1492 ntBASIC4.67□□□□□ -1.66
ClpbQ60649 Fbxw15-201ENSMUST00000056745 1495 ntAPPRIS P2 TSL 1 (best) BASIC4.67□□□□□ -1.66
ClpbQ60649 Amy1-201ENSMUST00000067980 1985 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
ClpbQ60649 Fpgt-201ENSMUST00000066568 3518 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
ClpbQ60649 Ctsj-202ENSMUST00000224224 1421 ntAPPRIS ALT2 BASIC4.66□□□□□ -1.66
ClpbQ60649 Rfc1-202ENSMUST00000203471 3952 ntAPPRIS ALT2 TSL 1 (best) BASIC4.66□□□□□ -1.66
ClpbQ60649 A230072E10Rik-202ENSMUST00000175825 3292 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
ClpbQ60649 Gm10488-201ENSMUST00000101657 874 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
ClpbQ60649 Ighv1-36-201ENSMUST00000103513 348 ntAPPRIS ALT2 BASIC4.66□□□□□ -1.66
ClpbQ60649 Gm25419-201ENSMUST00000104215 191 ntBASIC4.66□□□□□ -1.66
ClpbQ60649 Gm14575-201ENSMUST00000117210 560 ntBASIC4.66□□□□□ -1.66
ClpbQ60649 Gm15110-201ENSMUST00000117545 881 ntBASIC4.66□□□□□ -1.66
ClpbQ60649 Ccnb2-ps-201ENSMUST00000118290 623 ntBASIC4.66□□□□□ -1.66
ClpbQ60649 Gm14795-201ENSMUST00000118461 471 ntBASIC4.66□□□□□ -1.66
ClpbQ60649 Gm6121-201ENSMUST00000119231 924 ntAPPRIS P1 TSL 5 BASIC4.66□□□□□ -1.66
ClpbQ60649 Gm16179-201ENSMUST00000120685 373 ntBASIC4.66□□□□□ -1.66
ClpbQ60649 Gm15057-201ENSMUST00000121516 534 ntBASIC4.66□□□□□ -1.66
ClpbQ60649 Gm13149-201ENSMUST00000122071 339 ntBASIC4.66□□□□□ -1.66
ClpbQ60649 Rps10-ps3-201ENSMUST00000122317 500 ntBASIC4.66□□□□□ -1.66
ClpbQ60649 Gm17216-201ENSMUST00000130872 728 ntTSL 5 BASIC4.66□□□□□ -1.66
ClpbQ60649 Gm11381-201ENSMUST00000138574 420 ntTSL 5 BASIC4.66□□□□□ -1.66
ClpbQ60649 1700019E08Rik-202ENSMUST00000153567 635 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
ClpbQ60649 0610040B10Rik-201ENSMUST00000160231 501 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
ClpbQ60649 Gm21732-201ENSMUST00000179309 1083 ntAPPRIS P1 BASIC4.66□□□□□ -1.66
ClpbQ60649 Gm21773-201ENSMUST00000179355 1083 ntAPPRIS P1 BASIC4.66□□□□□ -1.66
Retrieved 100 of 76,532 protein–RNA pairs in 149.9 ms