Protein–RNA interactions for Protein: Q5SNZ0

Ccdc88a, Girdin, mousemouse

Predictions only

Length 1,873 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88aQ5SNZ0 Gprc6a-201ENSMUST00000020062 2856 ntAPPRIS P2 TSL 1 (best) BASIC4.78□□□□□ -1.64
Ccdc88aQ5SNZ0 Macf1-204ENSMUST00000106213 18957 ntTSL 5 BASIC4.78□□□□□ -1.64
Ccdc88aQ5SNZ0 Olfr148-202ENSMUST00000216801 2775 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
Ccdc88aQ5SNZ0 4930595M18Rik-201ENSMUST00000080083 2644 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
Ccdc88aQ5SNZ0 Gm26886-204ENSMUST00000181772 2085 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
Ccdc88aQ5SNZ0 Mir676-201ENSMUST00000102443 89 ntBASIC4.77□□□□□ -1.65
Ccdc88aQ5SNZ0 Trac-201ENSMUST00000103740 413 ntAPPRIS P1 BASIC4.77□□□□□ -1.65
Ccdc88aQ5SNZ0 Gm11372-201ENSMUST00000117348 570 ntBASIC4.77□□□□□ -1.65
Ccdc88aQ5SNZ0 Gm12173-201ENSMUST00000117622 273 ntBASIC4.77□□□□□ -1.65
Ccdc88aQ5SNZ0 Gimap4-204ENSMUST00000119575 900 ntTSL 3 BASIC4.77□□□□□ -1.65
Ccdc88aQ5SNZ0 Gm25104-201ENSMUST00000122476 163 ntBASIC4.77□□□□□ -1.65
Ccdc88aQ5SNZ0 Gm17416-201ENSMUST00000163724 201 ntAPPRIS P1 BASIC4.77□□□□□ -1.65
Ccdc88aQ5SNZ0 Nutf2-ps2-201ENSMUST00000179225 384 ntBASIC4.77□□□□□ -1.65
Ccdc88aQ5SNZ0 Gm26607-201ENSMUST00000180661 867 ntBASIC4.77□□□□□ -1.65
Ccdc88aQ5SNZ0 Mir6993-201ENSMUST00000184912 65 ntBASIC4.77□□□□□ -1.65
Ccdc88aQ5SNZ0 Gm29193-201ENSMUST00000187129 830 ntTSL 3 BASIC4.77□□□□□ -1.65
Ccdc88aQ5SNZ0 Gm28655-201ENSMUST00000191538 692 ntBASIC4.77□□□□□ -1.65
Ccdc88aQ5SNZ0 Gm44946-201ENSMUST00000208425 572 ntBASIC4.77□□□□□ -1.65
Ccdc88aQ5SNZ0 Gm45826-201ENSMUST00000212226 265 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
Ccdc88aQ5SNZ0 1700026F02Rik-205ENSMUST00000212266 787 ntTSL 5 BASIC4.77□□□□□ -1.65
Ccdc88aQ5SNZ0 AC161424.1-202ENSMUST00000213570 767 ntTSL 3 BASIC4.77□□□□□ -1.65
Ccdc88aQ5SNZ0 CT025536.1-201ENSMUST00000226744 844 ntBASIC4.77□□□□□ -1.65
Ccdc88aQ5SNZ0 AC121898.1-201ENSMUST00000227599 288 ntBASIC4.77□□□□□ -1.65
Ccdc88aQ5SNZ0 Olfr898-201ENSMUST00000076504 951 ntAPPRIS P2 BASIC4.77□□□□□ -1.65
Ccdc88aQ5SNZ0 Olfr898-202ENSMUST00000216304 3979 ntAPPRIS ALT2 TSL 5 BASIC4.77□□□□□ -1.65
Ccdc88aQ5SNZ0 Ccr5-202ENSMUST00000111442 8227 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
Ccdc88aQ5SNZ0 Olfr353-203ENSMUST00000217215 4173 ntAPPRIS P1 TSL 5 BASIC4.77□□□□□ -1.65
Ccdc88aQ5SNZ0 Nae1-201ENSMUST00000034349 1808 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
Ccdc88aQ5SNZ0 Gm42680-201ENSMUST00000196238 2500 ntBASIC4.77□□□□□ -1.65
Ccdc88aQ5SNZ0 Vmn1r171-203ENSMUST00000226321 3067 ntAPPRIS ALT2 BASIC4.77□□□□□ -1.65
Ccdc88aQ5SNZ0 9330159F19Rik-202ENSMUST00000213489 2992 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
Ccdc88aQ5SNZ0 Gm7233-201ENSMUST00000168619 1761 ntAPPRIS P1 TSL 5 BASIC4.77□□□□□ -1.65
Ccdc88aQ5SNZ0 Gm15988-201ENSMUST00000118677 367 ntBASIC4.77□□□□□ -1.65
Ccdc88aQ5SNZ0 Scgb2b22-ps-201ENSMUST00000121947 340 ntBASIC4.77□□□□□ -1.65
Ccdc88aQ5SNZ0 Gm25667-201ENSMUST00000157701 275 ntBASIC4.77□□□□□ -1.65
Ccdc88aQ5SNZ0 Gm23112-201ENSMUST00000158606 125 ntBASIC4.77□□□□□ -1.65
Ccdc88aQ5SNZ0 Gm22135-201ENSMUST00000158752 108 ntBASIC4.77□□□□□ -1.65
Ccdc88aQ5SNZ0 Obox2-202ENSMUST00000172478 818 ntAPPRIS P1 TSL 5 BASIC4.77□□□□□ -1.65
Ccdc88aQ5SNZ0 Gm6900-201ENSMUST00000178971 342 ntBASIC4.77□□□□□ -1.65
Ccdc88aQ5SNZ0 Gm17953-201ENSMUST00000192061 667 ntBASIC4.77□□□□□ -1.65
Ccdc88aQ5SNZ0 Gm8874-201ENSMUST00000196826 286 ntBASIC4.77□□□□□ -1.65
Ccdc88aQ5SNZ0 Olfr1252-203ENSMUST00000216203 3243 ntAPPRIS P1 TSL 3 BASIC4.77□□□□□ -1.65
Ccdc88aQ5SNZ0 Zfp981-201ENSMUST00000105735 3038 ntAPPRIS P1 TSL 2 BASIC4.77□□□□□ -1.65
Ccdc88aQ5SNZ0 Atp7a-201ENSMUST00000055941 4866 ntAPPRIS ALT2 TSL 1 (best) BASIC4.77□□□□□ -1.65
Ccdc88aQ5SNZ0 Gm42616-201ENSMUST00000198989 4184 ntBASIC4.77□□□□□ -1.65
Ccdc88aQ5SNZ0 Olfr365-202ENSMUST00000213969 5333 ntAPPRIS P1 TSL 5 BASIC4.77□□□□□ -1.65
Ccdc88aQ5SNZ0 Gm2004-201ENSMUST00000109049 1749 ntAPPRIS P1 TSL 5 BASIC4.76□□□□□ -1.65
Ccdc88aQ5SNZ0 Gm14419-202ENSMUST00000126358 1749 ntAPPRIS P1 TSL 5 BASIC4.76□□□□□ -1.65
Ccdc88aQ5SNZ0 Gm43200-201ENSMUST00000200385 2161 ntBASIC4.76□□□□□ -1.65
Ccdc88aQ5SNZ0 Olfr247-202ENSMUST00000215871 1983 ntAPPRIS P5 TSL 5 BASIC4.76□□□□□ -1.65
Ccdc88aQ5SNZ0 Rptn-201ENSMUST00000045912 4146 ntAPPRIS P1 TSL 5 BASIC4.76□□□□□ -1.65
Ccdc88aQ5SNZ0 Akr1c14-201ENSMUST00000041768 2436 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
Ccdc88aQ5SNZ0 Gm13961-201ENSMUST00000119282 4772 ntBASIC4.76□□□□□ -1.65
Ccdc88aQ5SNZ0 AC192333.5-201ENSMUST00000224620 2350 ntBASIC4.76□□□□□ -1.65
Ccdc88aQ5SNZ0 2210407C18Rik-202ENSMUST00000108821 998 ntAPPRIS P1 TSL 5 BASIC4.76□□□□□ -1.65
Ccdc88aQ5SNZ0 Gm11488-201ENSMUST00000117277 863 ntBASIC4.76□□□□□ -1.65
Ccdc88aQ5SNZ0 Ifna-ps1-201ENSMUST00000119856 555 ntBASIC4.76□□□□□ -1.65
Ccdc88aQ5SNZ0 Gm21773-201ENSMUST00000179355 1083 ntAPPRIS P1 BASIC4.76□□□□□ -1.65
Ccdc88aQ5SNZ0 Gm21921-201ENSMUST00000180040 1083 ntAPPRIS P1 BASIC4.76□□□□□ -1.65
Ccdc88aQ5SNZ0 Gm29395-201ENSMUST00000188551 1049 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
Ccdc88aQ5SNZ0 Gm36964-201ENSMUST00000191876 198 ntBASIC4.76□□□□□ -1.65
Ccdc88aQ5SNZ0 Gm44784-201ENSMUST00000207396 460 ntTSL 5 BASIC4.76□□□□□ -1.65
Ccdc88aQ5SNZ0 Gm8745-201ENSMUST00000207846 782 ntBASIC4.76□□□□□ -1.65
Ccdc88aQ5SNZ0 Znrd1as-204ENSMUST00000209623 1218 ntAPPRIS ALT2 TSL 5 BASIC4.76□□□□□ -1.65
Ccdc88aQ5SNZ0 1700037F03Rik-201ENSMUST00000223032 365 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
Ccdc88aQ5SNZ0 Olfr594-201ENSMUST00000098205 1087 ntAPPRIS P1 BASIC4.76□□□□□ -1.65
Ccdc88aQ5SNZ0 Mybpc1-201ENSMUST00000119185 3752 ntAPPRIS ALT2 TSL 1 (best) BASIC4.76□□□□□ -1.65
Ccdc88aQ5SNZ0 Vmn1r52-207ENSMUST00000228394 3069 ntAPPRIS P1 BASIC4.76□□□□□ -1.65
Ccdc88aQ5SNZ0 Med13-201ENSMUST00000043624 10546 ntAPPRIS P1 TSL 2 BASIC4.76□□□□□ -1.65
Ccdc88aQ5SNZ0 Gm37628-201ENSMUST00000194644 5440 ntBASIC4.75□□□□□ -1.65
Ccdc88aQ5SNZ0 Olfr372-202ENSMUST00000215324 3542 ntAPPRIS P1 TSL 5 BASIC4.75□□□□□ -1.65
Ccdc88aQ5SNZ0 Gm11829-201ENSMUST00000121003 282 ntBASIC4.75□□□□□ -1.65
Ccdc88aQ5SNZ0 Gm11656-201ENSMUST00000137462 395 ntTSL 5 BASIC4.75□□□□□ -1.65
Ccdc88aQ5SNZ0 Gm16566-201ENSMUST00000160387 910 ntBASIC4.75□□□□□ -1.65
Ccdc88aQ5SNZ0 Gm20538-201ENSMUST00000166808 225 ntAPPRIS P1 TSL 3 BASIC4.75□□□□□ -1.65
Ccdc88aQ5SNZ0 Gm20476-201ENSMUST00000172644 492 ntTSL 2 BASIC4.75□□□□□ -1.65
Ccdc88aQ5SNZ0 Gm14419-204ENSMUST00000178182 192 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
Ccdc88aQ5SNZ0 Gm2004-202ENSMUST00000178872 192 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
Ccdc88aQ5SNZ0 Gm14295-203ENSMUST00000179435 192 ntTSL 5 BASIC4.75□□□□□ -1.65
Ccdc88aQ5SNZ0 Trdv1-202ENSMUST00000187163 334 ntAPPRIS ALT2 BASIC4.75□□□□□ -1.65
Ccdc88aQ5SNZ0 Gm28701-201ENSMUST00000189778 1010 ntTSL 5 BASIC4.75□□□□□ -1.65
Ccdc88aQ5SNZ0 Gm37300-201ENSMUST00000193327 280 ntBASIC4.75□□□□□ -1.65
Ccdc88aQ5SNZ0 Gm38279-201ENSMUST00000194067 1131 ntBASIC4.75□□□□□ -1.65
Ccdc88aQ5SNZ0 4930598N05Rik-201ENSMUST00000207048 550 ntTSL 5 BASIC4.75□□□□□ -1.65
Ccdc88aQ5SNZ0 4930401A07Rik-202ENSMUST00000216155 360 ntTSL 2 BASIC4.75□□□□□ -1.65
Ccdc88aQ5SNZ0 AC154618.1-201ENSMUST00000227451 303 ntBASIC4.75□□□□□ -1.65
Ccdc88aQ5SNZ0 Olfr1505-201ENSMUST00000081520 1103 ntAPPRIS P1 BASIC4.75□□□□□ -1.65
Ccdc88aQ5SNZ0 Olfr1218-201ENSMUST00000099798 936 ntAPPRIS P1 BASIC4.75□□□□□ -1.65
Ccdc88aQ5SNZ0 Lpar6-201ENSMUST00000044405 5400 ntAPPRIS P1 BASIC4.75□□□□□ -1.65
Ccdc88aQ5SNZ0 Gm14295-202ENSMUST00000132883 2505 ntAPPRIS P1 TSL 5 BASIC4.75□□□□□ -1.65
Ccdc88aQ5SNZ0 Senp8-203ENSMUST00000177963 3792 ntAPPRIS P3 TSL 1 (best) BASIC4.75□□□□□ -1.65
Ccdc88aQ5SNZ0 Nlrp4e-201ENSMUST00000076470 3382 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
Ccdc88aQ5SNZ0 Olfr875-202ENSMUST00000215128 2039 ntAPPRIS P1 TSL 5 BASIC4.75□□□□□ -1.65
Ccdc88aQ5SNZ0 Gm29730-201ENSMUST00000192986 1396 ntBASIC4.75□□□□□ -1.65
Ccdc88aQ5SNZ0 Gm15313-201ENSMUST00000119179 282 ntBASIC4.75□□□□□ -1.65
Ccdc88aQ5SNZ0 Gm12379-201ENSMUST00000119607 391 ntBASIC4.75□□□□□ -1.65
Ccdc88aQ5SNZ0 Gm12900-201ENSMUST00000120919 573 ntBASIC4.75□□□□□ -1.65
Ccdc88aQ5SNZ0 Gm26036-201ENSMUST00000158149 144 ntBASIC4.75□□□□□ -1.65
Ccdc88aQ5SNZ0 Mir5128-201ENSMUST00000175217 84 ntBASIC4.75□□□□□ -1.65
Ccdc88aQ5SNZ0 Gm27254-201ENSMUST00000183926 517 ntBASIC4.75□□□□□ -1.65
Retrieved 100 of 76,532 protein–RNA pairs in 81.3 ms