Protein–RNA interactions for Protein: Q5NCC9

Trim58, E3 ubiquitin-protein ligase TRIM58, mousemouse

Predictions only

Length 485 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim58Q5NCC9 AI987944-204ENSMUST00000206801 1701 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
Trim58Q5NCC9 Olfr875-202ENSMUST00000215128 2039 ntAPPRIS P1 TSL 5 BASIC5.14□□□□□ -1.59
Trim58Q5NCC9 Olfr1180-203ENSMUST00000217320 2107 ntAPPRIS P1 TSL 5 BASIC5.14□□□□□ -1.59
Trim58Q5NCC9 Syne2-201ENSMUST00000044217 21690 ntAPPRIS P2 TSL 5 BASIC5.14□□□□□ -1.59
Trim58Q5NCC9 Olfr418-202ENSMUST00000213420 4388 ntAPPRIS P1 TSL 5 BASIC5.14□□□□□ -1.59
Trim58Q5NCC9 Traj31-201ENSMUST00000103710 57 ntAPPRIS P1 BASIC5.14□□□□□ -1.59
Trim58Q5NCC9 Gm15151-201ENSMUST00000117106 177 ntBASIC5.14□□□□□ -1.59
Trim58Q5NCC9 Gm15021-201ENSMUST00000117832 742 ntBASIC5.14□□□□□ -1.59
Trim58Q5NCC9 2610024D14Rik-201ENSMUST00000121233 294 ntBASIC5.14□□□□□ -1.59
Trim58Q5NCC9 Gm7618-201ENSMUST00000121643 171 ntBASIC5.14□□□□□ -1.59
Trim58Q5NCC9 Gm26312-201ENSMUST00000157769 165 ntBASIC5.14□□□□□ -1.59
Trim58Q5NCC9 5330439A09Rik-201ENSMUST00000162770 1117 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
Trim58Q5NCC9 Mir6391-201ENSMUST00000184391 104 ntBASIC5.14□□□□□ -1.59
Trim58Q5NCC9 Gm28396-201ENSMUST00000190309 379 ntBASIC5.14□□□□□ -1.59
Trim58Q5NCC9 Gm37088-201ENSMUST00000193887 406 ntBASIC5.14□□□□□ -1.59
Trim58Q5NCC9 n-TSaga9-201ENSMUST00000197675 107 ntBASIC5.14□□□□□ -1.59
Trim58Q5NCC9 Gm19104-201ENSMUST00000198392 679 ntBASIC5.14□□□□□ -1.59
Trim58Q5NCC9 Gm18100-201ENSMUST00000200897 452 ntBASIC5.14□□□□□ -1.59
Trim58Q5NCC9 Bc1-ps1-201ENSMUST00000208471 318 ntBASIC5.14□□□□□ -1.59
Trim58Q5NCC9 AC172027.1-201ENSMUST00000217659 337 ntBASIC5.14□□□□□ -1.59
Trim58Q5NCC9 CT010511.1-201ENSMUST00000224570 315 ntBASIC5.14□□□□□ -1.59
Trim58Q5NCC9 AC168059.1-201ENSMUST00000225846 841 ntBASIC5.14□□□□□ -1.59
Trim58Q5NCC9 AC154738.5-201ENSMUST00000227397 310 ntBASIC5.14□□□□□ -1.59
Trim58Q5NCC9 Olfr911-ps1-201ENSMUST00000074987 940 ntAPPRIS P1 BASIC5.14□□□□□ -1.59
Trim58Q5NCC9 Olfr611-201ENSMUST00000078108 972 ntAPPRIS P1 BASIC5.14□□□□□ -1.59
Trim58Q5NCC9 Vmn1r178-201ENSMUST00000078593 915 ntAPPRIS P1 BASIC5.14□□□□□ -1.59
Trim58Q5NCC9 Krtap31-1-201ENSMUST00000093935 973 ntAPPRIS P1 BASIC5.14□□□□□ -1.59
Trim58Q5NCC9 Olfr1178-202ENSMUST00000214040 6480 ntAPPRIS P1 TSL 5 BASIC5.14□□□□□ -1.59
Trim58Q5NCC9 Mndal-202ENSMUST00000186442 1646 ntAPPRIS ALT2 TSL 5 BASIC5.14□□□□□ -1.59
Trim58Q5NCC9 Vmn1r209-202ENSMUST00000227038 6461 ntAPPRIS P1 BASIC5.14□□□□□ -1.59
Trim58Q5NCC9 Gm7233-201ENSMUST00000168619 1761 ntAPPRIS P1 TSL 5 BASIC5.14□□□□□ -1.59
Trim58Q5NCC9 Olfr118-203ENSMUST00000216551 1772 ntAPPRIS P1 TSL 5 BASIC5.14□□□□□ -1.59
Trim58Q5NCC9 Vmn1r72-203ENSMUST00000227010 6279 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
Trim58Q5NCC9 AC123858.1-201ENSMUST00000226948 1874 ntBASIC5.13□□□□□ -1.59
Trim58Q5NCC9 Arrdc3-201ENSMUST00000099356 4101 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
Trim58Q5NCC9 Olfr919-202ENSMUST00000215612 1992 ntAPPRIS ALT2 TSL 5 BASIC5.13□□□□□ -1.59
Trim58Q5NCC9 Olfr145-202ENSMUST00000213688 6691 ntAPPRIS P1 TSL 5 BASIC5.13□□□□□ -1.59
Trim58Q5NCC9 Cbx3-ps3-201ENSMUST00000118595 550 ntBASIC5.13□□□□□ -1.59
Trim58Q5NCC9 Gm23789-201ENSMUST00000122536 301 ntBASIC5.13□□□□□ -1.59
Trim58Q5NCC9 Gm25843-201ENSMUST00000122582 314 ntBASIC5.13□□□□□ -1.59
Trim58Q5NCC9 Gm26320-201ENSMUST00000157742 306 ntBASIC5.13□□□□□ -1.59
Trim58Q5NCC9 4930445B16Rik-201ENSMUST00000170085 1123 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
Trim58Q5NCC9 Mrgprc1-ps-201ENSMUST00000185552 952 ntBASIC5.13□□□□□ -1.59
Trim58Q5NCC9 Gm37319-201ENSMUST00000193500 636 ntBASIC5.13□□□□□ -1.59
Trim58Q5NCC9 Gm37670-201ENSMUST00000193622 229 ntBASIC5.13□□□□□ -1.59
Trim58Q5NCC9 Ighv1-21-1-201ENSMUST00000195790 351 ntBASIC5.13□□□□□ -1.59
Trim58Q5NCC9 Gm43941-201ENSMUST00000203303 1073 ntBASIC5.13□□□□□ -1.59
Trim58Q5NCC9 Gm43892-201ENSMUST00000204373 265 ntBASIC5.13□□□□□ -1.59
Trim58Q5NCC9 Olfr1492-ps1-201ENSMUST00000207071 865 ntBASIC5.13□□□□□ -1.59
Trim58Q5NCC9 CT025616.1-201ENSMUST00000221158 412 ntBASIC5.13□□□□□ -1.59
Trim58Q5NCC9 Dynap-201ENSMUST00000025390 1227 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
Trim58Q5NCC9 Foxr2-202ENSMUST00000163801 3072 ntAPPRIS P1 TSL 5 BASIC5.13□□□□□ -1.59
Trim58Q5NCC9 9330158H04Rik-201ENSMUST00000101535 3174 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
Trim58Q5NCC9 Gm42455-201ENSMUST00000199761 2736 ntBASIC5.13□□□□□ -1.59
Trim58Q5NCC9 Olfr711-201ENSMUST00000051715 3035 ntAPPRIS P1 TSL 2 BASIC5.13□□□□□ -1.59
Trim58Q5NCC9 Gm21119-201ENSMUST00000178438 2522 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
Trim58Q5NCC9 Dnase2b-201ENSMUST00000029836 2566 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
Trim58Q5NCC9 Olfr706-202ENSMUST00000213918 4828 ntAPPRIS P1 TSL 5 BASIC5.12□□□□□ -1.59
Trim58Q5NCC9 Olfr694-204ENSMUST00000216895 4853 ntAPPRIS P1 TSL 5 BASIC5.12□□□□□ -1.59
Trim58Q5NCC9 Stk-ps2-201ENSMUST00000051224 4667 ntTSL 2 BASIC5.12□□□□□ -1.59
Trim58Q5NCC9 Gm14062-201ENSMUST00000134795 4134 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
Trim58Q5NCC9 Vmn1r184-204ENSMUST00000227534 4807 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
Trim58Q5NCC9 Frmpd3-201ENSMUST00000044702 3141 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
Trim58Q5NCC9 Gm9435-201ENSMUST00000120379 877 ntBASIC5.12□□□□□ -1.59
Trim58Q5NCC9 4933433F19Rik-201ENSMUST00000180571 1088 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
Trim58Q5NCC9 Gm19131-201ENSMUST00000203408 789 ntBASIC5.12□□□□□ -1.59
Trim58Q5NCC9 Gm8035-201ENSMUST00000204625 687 ntBASIC5.12□□□□□ -1.59
Trim58Q5NCC9 CT009711.3-201ENSMUST00000225882 250 ntBASIC5.12□□□□□ -1.59
Trim58Q5NCC9 Olfr1503-ps1-201ENSMUST00000076614 803 ntBASIC5.12□□□□□ -1.59
Trim58Q5NCC9 Rpl21-ps4-201ENSMUST00000080237 438 ntBASIC5.12□□□□□ -1.59
Trim58Q5NCC9 Olfr187-202ENSMUST00000207673 1322 ntAPPRIS P1 TSL 2 BASIC5.12□□□□□ -1.59
Trim58Q5NCC9 Olfr1368-202ENSMUST00000216039 1389 ntAPPRIS P1 TSL 3 BASIC5.12□□□□□ -1.59
Trim58Q5NCC9 Cftr-203ENSMUST00000115406 4341 ntAPPRIS ALT2 TSL 5 BASIC5.12□□□□□ -1.59
Trim58Q5NCC9 Gm4788-202ENSMUST00000111986 2935 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
Trim58Q5NCC9 Senp8-201ENSMUST00000051039 3682 ntAPPRIS P3 TSL 1 (best) BASIC5.12□□□□□ -1.59
Trim58Q5NCC9 Gm38269-201ENSMUST00000194549 3298 ntBASIC5.12□□□□□ -1.59
Trim58Q5NCC9 AC159476.1-201ENSMUST00000215914 1668 ntBASIC5.12□□□□□ -1.59
Trim58Q5NCC9 Erv3-201ENSMUST00000040941 3378 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
Trim58Q5NCC9 Mgat4e-202ENSMUST00000172898 1735 ntAPPRIS P1 TSL 2 BASIC5.11□□□□□ -1.59
Trim58Q5NCC9 Gm7173-201ENSMUST00000101410 2832 ntAPPRIS P4 TSL 5 BASIC5.11□□□□□ -1.59
Trim58Q5NCC9 Gm23178-201ENSMUST00000116782 95 ntBASIC5.11□□□□□ -1.59
Trim58Q5NCC9 Gm12465-201ENSMUST00000118591 300 ntBASIC5.11□□□□□ -1.59
Trim58Q5NCC9 Gm15267-201ENSMUST00000120888 464 ntBASIC5.11□□□□□ -1.59
Trim58Q5NCC9 Gm11216-201ENSMUST00000125240 354 ntTSL 5 BASIC5.11□□□□□ -1.59
Trim58Q5NCC9 Gm15882-201ENSMUST00000161344 855 ntTSL 3 BASIC5.11□□□□□ -1.59
Trim58Q5NCC9 Gm22398-201ENSMUST00000174941 125 ntBASIC5.11□□□□□ -1.59
Trim58Q5NCC9 Gm25731-201ENSMUST00000175167 125 ntBASIC5.11□□□□□ -1.59
Trim58Q5NCC9 Obox4-ps26-201ENSMUST00000176368 724 ntBASIC5.11□□□□□ -1.59
Trim58Q5NCC9 Rfpl4b-201ENSMUST00000179279 1054 ntAPPRIS P1 TSL 5 BASIC5.11□□□□□ -1.59
Trim58Q5NCC9 Gm5974-201ENSMUST00000181607 986 ntBASIC5.11□□□□□ -1.59
Trim58Q5NCC9 Gm7497-201ENSMUST00000183064 1003 ntBASIC5.11□□□□□ -1.59
Trim58Q5NCC9 Gm18728-201ENSMUST00000186155 753 ntBASIC5.11□□□□□ -1.59
Trim58Q5NCC9 Gm20954-201ENSMUST00000189078 644 ntBASIC5.11□□□□□ -1.59
Trim58Q5NCC9 Igkv12-47-201ENSMUST00000196961 356 ntBASIC5.11□□□□□ -1.59
Trim58Q5NCC9 AC127581.1-201ENSMUST00000214084 771 ntTSL 5 BASIC5.11□□□□□ -1.59
Trim58Q5NCC9 AC142113.2-201ENSMUST00000217425 748 ntBASIC5.11□□□□□ -1.59
Trim58Q5NCC9 Sprr2e-201ENSMUST00000068399 647 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
Trim58Q5NCC9 Olfr1029-201ENSMUST00000082191 1061 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
Trim58Q5NCC9 Gm6361-201ENSMUST00000091031 435 ntBASIC5.11□□□□□ -1.59
Trim58Q5NCC9 Olfr1104-201ENSMUST00000099869 933 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
Retrieved 100 of 76,532 protein–RNA pairs in 91.6 ms