Protein–RNA interactions for Protein: Q5NCC3

Trim41, E3 ubiquitin-protein ligase TRIM41, mousemouse

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim41Q5NCC3 AC090496.1-201ENSMUST00000226020 260 ntBASIC10.46□□□□□ -0.73
Trim41Q5NCC3 S100a9-201ENSMUST00000069960 512 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Trim41Q5NCC3 Rny1-201ENSMUST00000083767 112 ntBASIC10.46□□□□□ -0.73
Trim41Q5NCC3 Gm4017-201ENSMUST00000084813 338 ntBASIC10.46□□□□□ -0.73
Trim41Q5NCC3 Nova1-201ENSMUST00000021438 7154 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Trim41Q5NCC3 Olfr110-202ENSMUST00000216472 1721 ntAPPRIS P1 TSL 5 BASIC10.46□□□□□ -0.74
Trim41Q5NCC3 Gm38590-202ENSMUST00000210654 1803 ntTSL 5 BASIC10.46□□□□□ -0.74
Trim41Q5NCC3 Olfr150-202ENSMUST00000217257 1867 ntAPPRIS P1 TSL 5 BASIC10.46□□□□□ -0.74
Trim41Q5NCC3 Vmn1r198-204ENSMUST00000227167 5990 ntAPPRIS ALT2 BASIC10.46□□□□□ -0.74
Trim41Q5NCC3 Gm15170-201ENSMUST00000121593 2023 ntBASIC10.46□□□□□ -0.74
Trim41Q5NCC3 Sytl2-206ENSMUST00000190731 3838 ntAPPRIS ALT2 TSL 1 (best) BASIC10.46□□□□□ -0.74
Trim41Q5NCC3 AC153971.1-201ENSMUST00000215097 3811 ntBASIC10.46□□□□□ -0.74
Trim41Q5NCC3 Vmn1r51-202ENSMUST00000174204 4025 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Trim41Q5NCC3 Alpk1-206ENSMUST00000198955 4498 ntAPPRIS P1 TSL 5 BASIC10.46□□□□□ -0.74
Trim41Q5NCC3 Mpdz-202ENSMUST00000107258 7241 ntAPPRIS ALT2 TSL 1 (best) BASIC10.45□□□□□ -0.74
Trim41Q5NCC3 Nr3c1-204ENSMUST00000115571 6327 ntAPPRIS P2 TSL 1 (best) BASIC10.45□□□□□ -0.74
Trim41Q5NCC3 Hrh2-202ENSMUST00000209846 4074 ntAPPRIS ALT2 TSL 5 BASIC10.45□□□□□ -0.74
Trim41Q5NCC3 Olfr60-205ENSMUST00000216027 3300 ntAPPRIS P1 TSL 5 BASIC10.45□□□□□ -0.74
Trim41Q5NCC3 Gm20655-202ENSMUST00000181428 2946 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Trim41Q5NCC3 Gm45149-201ENSMUST00000206459 2172 ntBASIC10.45□□□□□ -0.74
Trim41Q5NCC3 Muc5b-201ENSMUST00000165147 14964 ntAPPRIS P1 TSL 5 BASIC10.45□□□□□ -0.74
Trim41Q5NCC3 Trp63-208ENSMUST00000115310 5366 ntAPPRIS ALT1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Trim41Q5NCC3 Xpnpep3-203ENSMUST00000163754 5383 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Trim41Q5NCC3 Gm42520-201ENSMUST00000199642 1502 ntBASIC10.45□□□□□ -0.74
Trim41Q5NCC3 Tmprss15-201ENSMUST00000023566 4177 ntAPPRIS P3 TSL 1 (best) BASIC10.45□□□□□ -0.74
Trim41Q5NCC3 Gm13452-201ENSMUST00000120896 1097 ntBASIC10.45□□□□□ -0.74
Trim41Q5NCC3 Gm12893-201ENSMUST00000121732 275 ntBASIC10.45□□□□□ -0.74
Trim41Q5NCC3 Gm16086-201ENSMUST00000143652 371 ntTSL 3 BASIC10.45□□□□□ -0.74
Trim41Q5NCC3 Gm22819-201ENSMUST00000157445 303 ntBASIC10.45□□□□□ -0.74
Trim41Q5NCC3 Gm22867-201ENSMUST00000157499 109 ntBASIC10.45□□□□□ -0.74
Trim41Q5NCC3 Gm25706-201ENSMUST00000157828 247 ntBASIC10.45□□□□□ -0.74
Trim41Q5NCC3 Gm3470-201ENSMUST00000160819 420 ntBASIC10.45□□□□□ -0.74
Trim41Q5NCC3 Gm17206-201ENSMUST00000168123 577 ntTSL 5 BASIC10.45□□□□□ -0.74
Trim41Q5NCC3 Gm13698-201ENSMUST00000178325 732 ntTSL 5 BASIC10.45□□□□□ -0.74
Trim41Q5NCC3 Gm13694-202ENSMUST00000178655 732 ntTSL 5 BASIC10.45□□□□□ -0.74
Trim41Q5NCC3 Gm8247-202ENSMUST00000178759 375 ntAPPRIS ALT2 TSL 5 BASIC10.45□□□□□ -0.74
Trim41Q5NCC3 Gm13696-201ENSMUST00000179311 732 ntTSL 5 BASIC10.45□□□□□ -0.74
Trim41Q5NCC3 Gm13693-202ENSMUST00000179448 732 ntTSL 5 BASIC10.45□□□□□ -0.74
Trim41Q5NCC3 Gm13695-202ENSMUST00000179504 732 ntTSL 5 BASIC10.45□□□□□ -0.74
Trim41Q5NCC3 Gm13697-202ENSMUST00000179552 732 ntTSL 5 BASIC10.45□□□□□ -0.74
Trim41Q5NCC3 Mir6907-201ENSMUST00000183764 71 ntBASIC10.45□□□□□ -0.74
Trim41Q5NCC3 Gm18553-201ENSMUST00000194152 634 ntBASIC10.45□□□□□ -0.74
Trim41Q5NCC3 Mir31-201ENSMUST00000083474 106 ntBASIC10.45□□□□□ -0.74
Trim41Q5NCC3 n-R5s69-201ENSMUST00000083872 119 ntBASIC10.45□□□□□ -0.74
Trim41Q5NCC3 Gm23503-201ENSMUST00000083903 107 ntBASIC10.45□□□□□ -0.74
Trim41Q5NCC3 Gm10717-202ENSMUST00000099042 669 ntAPPRIS P5 TSL 5 BASIC10.45□□□□□ -0.74
Trim41Q5NCC3 Gm26984-201ENSMUST00000182345 3510 ntBASIC10.45□□□□□ -0.74
Trim41Q5NCC3 Foxp1-204ENSMUST00000113322 7177 ntTSL 5 BASIC10.45□□□□□ -0.74
Trim41Q5NCC3 AC133498.1-201ENSMUST00000222871 2925 ntTSL 5 BASIC10.45□□□□□ -0.74
Trim41Q5NCC3 C1s2-202ENSMUST00000218020 2662 ntAPPRIS P2 TSL 1 (best) BASIC10.45□□□□□ -0.74
Trim41Q5NCC3 C1s2-201ENSMUST00000068797 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC10.45□□□□□ -0.74
Trim41Q5NCC3 Ppp1r1c-202ENSMUST00000090760 2644 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Trim41Q5NCC3 4933406F09Rik-204ENSMUST00000181409 2078 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Trim41Q5NCC3 AC116950.1-201ENSMUST00000226322 3250 ntBASIC10.45□□□□□ -0.74
Trim41Q5NCC3 Cnpy1-205ENSMUST00000141601 3018 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Trim41Q5NCC3 Olfr558-201ENSMUST00000094124 3041 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Trim41Q5NCC3 Gm10220-201ENSMUST00000088236 2980 ntAPPRIS P1 TSL 5 BASIC10.44□□□□□ -0.74
Trim41Q5NCC3 Olfr780-202ENSMUST00000215503 2910 ntAPPRIS P1 TSL 5 BASIC10.44□□□□□ -0.74
Trim41Q5NCC3 Gm9573-201ENSMUST00000164502 5231 ntAPPRIS P1 TSL 5 BASIC10.44□□□□□ -0.74
Trim41Q5NCC3 C230038L03Rik-201ENSMUST00000129409 2632 ntTSL 2 BASIC10.44□□□□□ -0.74
Trim41Q5NCC3 Med12-201ENSMUST00000087948 6809 ntAPPRIS P2 TSL 1 (best) BASIC10.44□□□□□ -0.74
Trim41Q5NCC3 Gm28679-201ENSMUST00000186013 1499 ntTSL 5 BASIC10.44□□□□□ -0.74
Trim41Q5NCC3 Gm28135-201ENSMUST00000186847 1499 ntTSL 5 BASIC10.44□□□□□ -0.74
Trim41Q5NCC3 Gm28291-202ENSMUST00000186921 1499 ntTSL 5 BASIC10.44□□□□□ -0.74
Trim41Q5NCC3 Gm29547-201ENSMUST00000187258 1499 ntTSL 5 BASIC10.44□□□□□ -0.74
Trim41Q5NCC3 Gm28225-201ENSMUST00000187730 1499 ntTSL 5 BASIC10.44□□□□□ -0.74
Trim41Q5NCC3 Gm29297-202ENSMUST00000188186 1499 ntTSL 5 BASIC10.44□□□□□ -0.74
Trim41Q5NCC3 Gm28236-203ENSMUST00000188311 1499 ntTSL 5 BASIC10.44□□□□□ -0.74
Trim41Q5NCC3 Gm29070-202ENSMUST00000188541 1499 ntTSL 5 BASIC10.44□□□□□ -0.74
Trim41Q5NCC3 Gm29265-201ENSMUST00000188697 1499 ntTSL 5 BASIC10.44□□□□□ -0.74
Trim41Q5NCC3 Gm28947-203ENSMUST00000188701 1499 ntTSL 5 BASIC10.44□□□□□ -0.74
Trim41Q5NCC3 Gm28454-203ENSMUST00000190183 1495 ntTSL 5 BASIC10.44□□□□□ -0.74
Trim41Q5NCC3 Gm28842-202ENSMUST00000190289 1499 ntTSL 5 BASIC10.44□□□□□ -0.74
Trim41Q5NCC3 Gm28633-202ENSMUST00000190867 1485 ntTSL 5 BASIC10.44□□□□□ -0.74
Trim41Q5NCC3 Gm28632-202ENSMUST00000191193 1499 ntTSL 5 BASIC10.44□□□□□ -0.74
Trim41Q5NCC3 Gm28245-203ENSMUST00000191551 1495 ntTSL 5 BASIC10.44□□□□□ -0.74
Trim41Q5NCC3 Olfr516-202ENSMUST00000216092 1493 ntAPPRIS P1 TSL 5 BASIC10.44□□□□□ -0.74
Trim41Q5NCC3 Hyal4-201ENSMUST00000031691 3269 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Trim41Q5NCC3 Sgip1-205ENSMUST00000106882 6061 ntAPPRIS ALT2 TSL 5 BASIC10.44□□□□□ -0.74
Trim41Q5NCC3 Gm45786-201ENSMUST00000213021 2278 ntBASIC10.44□□□□□ -0.74
Trim41Q5NCC3 Gm24886-201ENSMUST00000104384 123 ntBASIC10.44□□□□□ -0.74
Trim41Q5NCC3 Defb5-201ENSMUST00000110763 207 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Trim41Q5NCC3 Gm11550-201ENSMUST00000118210 699 ntBASIC10.44□□□□□ -0.74
Trim41Q5NCC3 Gm13531-201ENSMUST00000121893 543 ntBASIC10.44□□□□□ -0.74
Trim41Q5NCC3 Tnfaip8-203ENSMUST00000126666 906 ntTSL 2 BASIC10.44□□□□□ -0.74
Trim41Q5NCC3 Zfp169-202ENSMUST00000167682 411 ntTSL 5 BASIC10.44□□□□□ -0.74
Trim41Q5NCC3 Gm20480-201ENSMUST00000173953 250 ntBASIC10.44□□□□□ -0.74
Trim41Q5NCC3 Gm29196-201ENSMUST00000189239 618 ntBASIC10.44□□□□□ -0.74
Trim41Q5NCC3 Gm44494-201ENSMUST00000196760 129 ntBASIC10.44□□□□□ -0.74
Trim41Q5NCC3 Gm7128-201ENSMUST00000211639 533 ntBASIC10.44□□□□□ -0.74
Trim41Q5NCC3 AC161758.1-201ENSMUST00000226123 310 ntBASIC10.44□□□□□ -0.74
Trim41Q5NCC3 Gm24200-201ENSMUST00000082955 157 ntBASIC10.44□□□□□ -0.74
Trim41Q5NCC3 Gm37186-201ENSMUST00000195629 2861 ntBASIC10.44□□□□□ -0.74
Trim41Q5NCC3 Trrap-203ENSMUST00000100467 12479 ntAPPRIS P2 TSL 1 (best) BASIC10.44□□□□□ -0.74
Trim41Q5NCC3 Trrap-202ENSMUST00000094120 12456 ntAPPRIS ALT2 TSL 5 BASIC10.44□□□□□ -0.74
Trim41Q5NCC3 Gm14929-201ENSMUST00000152079 1850 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Trim41Q5NCC3 Gm42680-201ENSMUST00000196238 2500 ntBASIC10.44□□□□□ -0.74
Trim41Q5NCC3 Gm45117-201ENSMUST00000207250 1774 ntBASIC10.44□□□□□ -0.74
Trim41Q5NCC3 Nlrc3-204ENSMUST00000180200 3842 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Trim41Q5NCC3 Gm5930-201ENSMUST00000111863 1746 ntAPPRIS P1 TSL 5 BASIC10.44□□□□□ -0.74
Retrieved 100 of 76,532 protein–RNA pairs in 98.5 ms