Protein–RNA interactions for Protein: Q4QRL3

Ccdc88b, Coiled-coil domain-containing protein 88B, mousemouse

Predictions only

Length 1,481 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88bQ4QRL3 AC113291.1-201ENSMUST00000217557 403 ntTSL 3 BASIC6.67□□□□□ -1.34
Ccdc88bQ4QRL3 AC155167.1-201ENSMUST00000228931 614 ntBASIC6.67□□□□□ -1.34
Ccdc88bQ4QRL3 Olfr167-201ENSMUST00000054606 939 ntAPPRIS P1 BASIC6.67□□□□□ -1.34
Ccdc88bQ4QRL3 Creb5-203ENSMUST00000203528 7917 ntAPPRIS P2 TSL 5 BASIC6.67□□□□□ -1.34
Ccdc88bQ4QRL3 Clca4c-ps-202ENSMUST00000200595 2779 ntBASIC6.67□□□□□ -1.34
Ccdc88bQ4QRL3 Kcnj1-201ENSMUST00000047334 2987 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
Ccdc88bQ4QRL3 Nlrp4b-201ENSMUST00000047809 3274 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
Ccdc88bQ4QRL3 Gm3183-202ENSMUST00000201703 2048 ntAPPRIS P5 TSL 1 (best) BASIC6.67□□□□□ -1.34
Ccdc88bQ4QRL3 Gm45160-201ENSMUST00000207112 3099 ntBASIC6.67□□□□□ -1.34
Ccdc88bQ4QRL3 Gprc6a-201ENSMUST00000020062 2856 ntAPPRIS P2 TSL 1 (best) BASIC6.67□□□□□ -1.34
Ccdc88bQ4QRL3 Vmn1r71-202ENSMUST00000226874 5194 ntAPPRIS P2 BASIC6.67□□□□□ -1.34
Ccdc88bQ4QRL3 Traj2-201ENSMUST00000103738 66 ntAPPRIS P1 BASIC6.66□□□□□ -1.34
Ccdc88bQ4QRL3 Gm12564-201ENSMUST00000119860 321 ntBASIC6.66□□□□□ -1.34
Ccdc88bQ4QRL3 Fam184a-206ENSMUST00000169866 501 ntTSL 5 BASIC6.66□□□□□ -1.34
Ccdc88bQ4QRL3 Faiml-201ENSMUST00000178051 785 ntAPPRIS P1 TSL 5 BASIC6.66□□□□□ -1.34
Ccdc88bQ4QRL3 Gm20834-201ENSMUST00000179558 684 ntAPPRIS P1 BASIC6.66□□□□□ -1.34
Ccdc88bQ4QRL3 Gm37741-201ENSMUST00000191768 1256 ntBASIC6.66□□□□□ -1.34
Ccdc88bQ4QRL3 Vmn2r30-202ENSMUST00000174368 3688 ntTSL 2 BASIC6.66□□□□□ -1.34
Ccdc88bQ4QRL3 Gm13212-203ENSMUST00000119718 2498 ntTSL 5 BASIC6.66□□□□□ -1.34
Ccdc88bQ4QRL3 Zfp26-203ENSMUST00000159569 11276 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
Ccdc88bQ4QRL3 Fastkd2-201ENSMUST00000027103 4486 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
Ccdc88bQ4QRL3 Igkv7-33-201ENSMUST00000103376 362 ntAPPRIS ALT2 BASIC6.66□□□□□ -1.34
Ccdc88bQ4QRL3 Rpl36a-ps3-201ENSMUST00000120093 321 ntBASIC6.66□□□□□ -1.34
Ccdc88bQ4QRL3 Gm16024-201ENSMUST00000128841 171 ntTSL 3 BASIC6.66□□□□□ -1.34
Ccdc88bQ4QRL3 9130015L21Rik-201ENSMUST00000140319 606 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
Ccdc88bQ4QRL3 Gm16134-201ENSMUST00000161714 336 ntBASIC6.66□□□□□ -1.34
Ccdc88bQ4QRL3 Traj57-202ENSMUST00000196977 63 ntAPPRIS P1 BASIC6.66□□□□□ -1.34
Ccdc88bQ4QRL3 Gm3829-201ENSMUST00000222362 619 ntBASIC6.66□□□□□ -1.34
Ccdc88bQ4QRL3 Olfr906-201ENSMUST00000045493 936 ntAPPRIS P1 BASIC6.66□□□□□ -1.34
Ccdc88bQ4QRL3 Olfr811-201ENSMUST00000076437 960 ntAPPRIS P1 BASIC6.66□□□□□ -1.34
Ccdc88bQ4QRL3 Prune2-201ENSMUST00000087689 12512 ntAPPRIS P1 TSL 5 BASIC6.65□□□□□ -1.34
Ccdc88bQ4QRL3 Olfr633-202ENSMUST00000216006 3915 ntAPPRIS P1 TSL 5 BASIC6.65□□□□□ -1.34
Ccdc88bQ4QRL3 Mgat4e-202ENSMUST00000172898 1735 ntAPPRIS P1 TSL 2 BASIC6.65□□□□□ -1.34
Ccdc88bQ4QRL3 Olfr1489-202ENSMUST00000217182 11140 ntAPPRIS P1 TSL 5 BASIC6.65□□□□□ -1.34
Ccdc88bQ4QRL3 Slfn10-ps-201ENSMUST00000100716 3621 ntTSL 1 (best) BASIC6.65□□□□□ -1.35
Ccdc88bQ4QRL3 Clvs1-201ENSMUST00000038841 3604 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.35
Ccdc88bQ4QRL3 AC123858.1-201ENSMUST00000226948 1874 ntBASIC6.65□□□□□ -1.35
Ccdc88bQ4QRL3 Hfm1-201ENSMUST00000112690 5018 ntAPPRIS P1 TSL 5 BASIC6.65□□□□□ -1.35
Ccdc88bQ4QRL3 Hmgb1-ps1-201ENSMUST00000119350 634 ntBASIC6.65□□□□□ -1.35
Ccdc88bQ4QRL3 Gm11656-201ENSMUST00000137462 395 ntTSL 5 BASIC6.65□□□□□ -1.35
Ccdc88bQ4QRL3 Gm24014-201ENSMUST00000157728 157 ntBASIC6.65□□□□□ -1.35
Ccdc88bQ4QRL3 Gm29484-201ENSMUST00000186067 324 ntBASIC6.65□□□□□ -1.35
Ccdc88bQ4QRL3 Gm38098-201ENSMUST00000194115 241 ntBASIC6.65□□□□□ -1.35
Ccdc88bQ4QRL3 2400006E01Rik-203ENSMUST00000199633 643 ntTSL 1 (best) BASIC6.65□□□□□ -1.35
Ccdc88bQ4QRL3 Olfr566-202ENSMUST00000209952 1066 ntAPPRIS ALT1 TSL 3 BASIC6.65□□□□□ -1.35
Ccdc88bQ4QRL3 Olfr936-202ENSMUST00000216912 937 ntBASIC6.65□□□□□ -1.35
Ccdc88bQ4QRL3 Gm34609-201ENSMUST00000219284 789 ntTSL 5 BASIC6.65□□□□□ -1.35
Ccdc88bQ4QRL3 Gm35615-201ENSMUST00000221255 719 ntTSL 3 BASIC6.65□□□□□ -1.35
Ccdc88bQ4QRL3 AC122397.2-201ENSMUST00000227422 686 ntBASIC6.65□□□□□ -1.35
Ccdc88bQ4QRL3 AC154467.1-201ENSMUST00000227527 449 ntBASIC6.65□□□□□ -1.35
Ccdc88bQ4QRL3 Olfr566-201ENSMUST00000071393 951 ntAPPRIS P2 BASIC6.65□□□□□ -1.35
Ccdc88bQ4QRL3 Vmn1r211-201ENSMUST00000073728 985 ntAPPRIS P1 BASIC6.65□□□□□ -1.35
Ccdc88bQ4QRL3 Cfap97-206ENSMUST00000164504 4521 ntAPPRIS P2 TSL 1 (best) BASIC6.65□□□□□ -1.35
Ccdc88bQ4QRL3 Olfr753-ps1-204ENSMUST00000219487 2956 ntAPPRIS P1 TSL 5 BASIC6.65□□□□□ -1.35
Ccdc88bQ4QRL3 Vmn1r235-201ENSMUST00000060603 1781 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
Ccdc88bQ4QRL3 Cav1-201ENSMUST00000007799 2522 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
Ccdc88bQ4QRL3 Olfr1307-201ENSMUST00000099604 15582 ntAPPRIS P1 TSL 5 BASIC6.64□□□□□ -1.35
Ccdc88bQ4QRL3 2700016F22Rik-201ENSMUST00000181556 3605 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
Ccdc88bQ4QRL3 Gm3772-201ENSMUST00000221404 1887 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
Ccdc88bQ4QRL3 Zfp11-201ENSMUST00000049778 3929 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
Ccdc88bQ4QRL3 AC101945.4-201ENSMUST00000228464 1976 ntBASIC6.64□□□□□ -1.35
Ccdc88bQ4QRL3 Gm45137-201ENSMUST00000208652 4415 ntBASIC6.64□□□□□ -1.35
Ccdc88bQ4QRL3 AC158605.3-201ENSMUST00000218999 2538 ntBASIC6.64□□□□□ -1.35
Ccdc88bQ4QRL3 1700034E13Rik-202ENSMUST00000118724 490 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
Ccdc88bQ4QRL3 Gm15461-201ENSMUST00000143488 235 ntTSL 3 BASIC6.64□□□□□ -1.35
Ccdc88bQ4QRL3 Gm11579-201ENSMUST00000145502 845 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
Ccdc88bQ4QRL3 9330182O14Rik-201ENSMUST00000179120 423 ntAPPRIS P1 TSL 5 BASIC6.64□□□□□ -1.35
Ccdc88bQ4QRL3 Gm10067-201ENSMUST00000179462 348 ntBASIC6.64□□□□□ -1.35
Ccdc88bQ4QRL3 Otx2os1-201ENSMUST00000183522 866 ntTSL 3 BASIC6.64□□□□□ -1.35
Ccdc88bQ4QRL3 Gm7443-201ENSMUST00000206355 378 ntBASIC6.64□□□□□ -1.35
Ccdc88bQ4QRL3 Gm45344-201ENSMUST00000211610 341 ntBASIC6.64□□□□□ -1.35
Ccdc88bQ4QRL3 Gm39197-201ENSMUST00000212069 457 ntBASIC6.64□□□□□ -1.35
Ccdc88bQ4QRL3 Mbd3l1-202ENSMUST00000213625 823 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
Ccdc88bQ4QRL3 Gm4928-201ENSMUST00000219622 850 ntBASIC6.64□□□□□ -1.35
Ccdc88bQ4QRL3 AC140209.1-201ENSMUST00000227875 284 ntBASIC6.64□□□□□ -1.35
Ccdc88bQ4QRL3 Bcl2a1a-201ENSMUST00000098485 819 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
Ccdc88bQ4QRL3 Gm37718-201ENSMUST00000191655 2631 ntBASIC6.64□□□□□ -1.35
Ccdc88bQ4QRL3 Gm28441-201ENSMUST00000190927 1343 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
Ccdc88bQ4QRL3 AI481877-201ENSMUST00000107547 4664 ntAPPRIS P1 TSL 5 BASIC6.63□□□□□ -1.35
Ccdc88bQ4QRL3 Olfr1501-202ENSMUST00000208493 4230 ntAPPRIS P1 TSL 2 BASIC6.63□□□□□ -1.35
Ccdc88bQ4QRL3 Rbm46-203ENSMUST00000182818 2115 ntTSL 5 BASIC6.63□□□□□ -1.35
Ccdc88bQ4QRL3 Gm25369-201ENSMUST00000158848 132 ntBASIC6.63□□□□□ -1.35
Ccdc88bQ4QRL3 H2al1k-201ENSMUST00000178196 510 ntAPPRIS P1 BASIC6.63□□□□□ -1.35
Ccdc88bQ4QRL3 Gm29554-201ENSMUST00000187922 821 ntAPPRIS P1 TSL 5 BASIC6.63□□□□□ -1.35
Ccdc88bQ4QRL3 Gm17916-203ENSMUST00000189918 324 ntTSL 5 BASIC6.63□□□□□ -1.35
Ccdc88bQ4QRL3 AC166343.1-201ENSMUST00000213261 577 ntBASIC6.63□□□□□ -1.35
Ccdc88bQ4QRL3 Gm23925-201ENSMUST00000082471 132 ntBASIC6.63□□□□□ -1.35
Ccdc88bQ4QRL3 Gm23736-201ENSMUST00000082553 75 ntBASIC6.63□□□□□ -1.35
Ccdc88bQ4QRL3 Olfr301-201ENSMUST00000174362 1937 ntAPPRIS P1 TSL 3 BASIC6.63□□□□□ -1.35
Ccdc88bQ4QRL3 Gm42768-201ENSMUST00000197734 2897 ntBASIC6.63□□□□□ -1.35
Ccdc88bQ4QRL3 Olfr736-202ENSMUST00000213402 2402 ntAPPRIS P1 TSL 5 BASIC6.63□□□□□ -1.35
Ccdc88bQ4QRL3 Cntn6-202ENSMUST00000161070 3515 ntTSL 5 BASIC6.63□□□□□ -1.35
Ccdc88bQ4QRL3 Abcg3-201ENSMUST00000031239 3035 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
Ccdc88bQ4QRL3 Vmn1r17-203ENSMUST00000228156 2090 ntAPPRIS ALT2 BASIC6.62□□□□□ -1.35
Ccdc88bQ4QRL3 Zfp931-202ENSMUST00000108924 962 ntAPPRIS P1 TSL 3 BASIC6.62□□□□□ -1.35
Ccdc88bQ4QRL3 Gm14399-203ENSMUST00000109059 703 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
Ccdc88bQ4QRL3 Gm14399-205ENSMUST00000109062 626 ntTSL 5 BASIC6.62□□□□□ -1.35
Ccdc88bQ4QRL3 Gm13478-201ENSMUST00000118312 413 ntBASIC6.62□□□□□ -1.35
Ccdc88bQ4QRL3 Zfp931-204ENSMUST00000131702 704 ntTSL 3 BASIC6.62□□□□□ -1.35
Ccdc88bQ4QRL3 Gm14228-201ENSMUST00000131908 798 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
Retrieved 100 of 76,532 protein–RNA pairs in 75.8 ms