Protein–RNA interactions for Protein: Q3ULJ3

Upf3a, MCG3697, isoform CRA_c, mousemouse

Predictions only

Length 422 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3aQ3ULJ3 Gm11931-201ENSMUST00000121630 447 ntBASIC4.51□□□□□ -1.69
Upf3aQ3ULJ3 Gm12103-201ENSMUST00000121892 362 ntBASIC4.51□□□□□ -1.69
Upf3aQ3ULJ3 Igkv2-95-2-201ENSMUST00000166362 222 ntBASIC4.51□□□□□ -1.69
Upf3aQ3ULJ3 Gm23215-201ENSMUST00000178153 121 ntBASIC4.51□□□□□ -1.69
Upf3aQ3ULJ3 Mir6345-201ENSMUST00000184286 128 ntBASIC4.51□□□□□ -1.69
Upf3aQ3ULJ3 Gm27457-201ENSMUST00000184771 156 ntBASIC4.51□□□□□ -1.69
Upf3aQ3ULJ3 Gm28701-201ENSMUST00000189778 1010 ntTSL 5 BASIC4.51□□□□□ -1.69
Upf3aQ3ULJ3 2610001A08Rik-201ENSMUST00000193315 867 ntBASIC4.51□□□□□ -1.69
Upf3aQ3ULJ3 Gm7468-201ENSMUST00000203900 652 ntBASIC4.51□□□□□ -1.69
Upf3aQ3ULJ3 Gm44733-201ENSMUST00000208067 543 ntTSL 3 BASIC4.51□□□□□ -1.69
Upf3aQ3ULJ3 RMST_1.1-204ENSMUST00000217871 699 ntTSL 5 BASIC4.51□□□□□ -1.69
Upf3aQ3ULJ3 AC153938.2-201ENSMUST00000218388 580 ntTSL 5 BASIC4.51□□□□□ -1.69
Upf3aQ3ULJ3 Gm6171-201ENSMUST00000220760 645 ntBASIC4.51□□□□□ -1.69
Upf3aQ3ULJ3 AC163354.1-203ENSMUST00000222356 643 ntTSL 5 BASIC4.51□□□□□ -1.69
Upf3aQ3ULJ3 AC154738.1-201ENSMUST00000227054 368 ntBASIC4.51□□□□□ -1.69
Upf3aQ3ULJ3 Il6-201ENSMUST00000026845 1141 ntAPPRIS P2 TSL 1 (best) BASIC4.51□□□□□ -1.69
Upf3aQ3ULJ3 2610303G11Rik-201ENSMUST00000061643 517 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
Upf3aQ3ULJ3 Olfr186-201ENSMUST00000062380 1005 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
Upf3aQ3ULJ3 Olfr1408-201ENSMUST00000073663 1037 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
Upf3aQ3ULJ3 Mir129-2-201ENSMUST00000083577 90 ntBASIC4.51□□□□□ -1.69
Upf3aQ3ULJ3 Gm25821-201ENSMUST00000093657 133 ntBASIC4.51□□□□□ -1.69
Upf3aQ3ULJ3 Clca4c-ps-201ENSMUST00000098551 712 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
Upf3aQ3ULJ3 Tfpi-205ENSMUST00000111717 2962 ntTSL 5 BASIC4.51□□□□□ -1.69
Upf3aQ3ULJ3 Gm38259-201ENSMUST00000194602 3534 ntBASIC4.51□□□□□ -1.69
Upf3aQ3ULJ3 1700097M23Rik-201ENSMUST00000204079 1522 ntBASIC4.51□□□□□ -1.69
Upf3aQ3ULJ3 Cul4b-203ENSMUST00000115118 3344 ntAPPRIS P2 TSL 1 (best) BASIC4.51□□□□□ -1.69
Upf3aQ3ULJ3 Nexn-212ENSMUST00000199470 2392 ntAPPRIS ALT2 TSL 5 BASIC4.5□□□□□ -1.69
Upf3aQ3ULJ3 Dach2-202ENSMUST00000113378 2089 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
Upf3aQ3ULJ3 Agtr1b-202ENSMUST00000163776 1633 ntAPPRIS P1 TSL 5 BASIC4.5□□□□□ -1.69
Upf3aQ3ULJ3 Vmn1r195-202ENSMUST00000228711 3056 ntAPPRIS P1 BASIC4.5□□□□□ -1.69
Upf3aQ3ULJ3 Olfr145-202ENSMUST00000213688 6691 ntAPPRIS P1 TSL 5 BASIC4.5□□□□□ -1.69
Upf3aQ3ULJ3 BC051142-201ENSMUST00000078615 1899 ntAPPRIS P3 TSL 1 (best) BASIC4.5□□□□□ -1.69
Upf3aQ3ULJ3 Vmn1r43-203ENSMUST00000226741 12542 ntAPPRIS P1 BASIC4.5□□□□□ -1.69
Upf3aQ3ULJ3 Gm44321-201ENSMUST00000204262 2855 ntBASIC4.5□□□□□ -1.69
Upf3aQ3ULJ3 Olfr788-202ENSMUST00000213222 4747 ntAPPRIS P1 TSL 5 BASIC4.5□□□□□ -1.69
Upf3aQ3ULJ3 4930544M13Rik-202ENSMUST00000181553 1403 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
Upf3aQ3ULJ3 Olfr570-202ENSMUST00000209778 1423 ntAPPRIS P1 TSL 5 BASIC4.5□□□□□ -1.69
Upf3aQ3ULJ3 AC160931.3-201ENSMUST00000222111 2267 ntBASIC4.5□□□□□ -1.69
Upf3aQ3ULJ3 Gm24281-201ENSMUST00000104234 136 ntBASIC4.5□□□□□ -1.69
Upf3aQ3ULJ3 2210407C18Rik-202ENSMUST00000108821 998 ntAPPRIS P1 TSL 5 BASIC4.5□□□□□ -1.69
Upf3aQ3ULJ3 Gm8666-201ENSMUST00000117517 292 ntBASIC4.5□□□□□ -1.69
Upf3aQ3ULJ3 Gm14861-201ENSMUST00000119451 455 ntBASIC4.5□□□□□ -1.69
Upf3aQ3ULJ3 Gm11866-201ENSMUST00000120209 335 ntBASIC4.5□□□□□ -1.69
Upf3aQ3ULJ3 Gm11398-201ENSMUST00000120330 320 ntBASIC4.5□□□□□ -1.69
Upf3aQ3ULJ3 Gm15263-201ENSMUST00000121556 642 ntBASIC4.5□□□□□ -1.69
Upf3aQ3ULJ3 Gm15534-201ENSMUST00000137642 562 ntBASIC4.5□□□□□ -1.69
Upf3aQ3ULJ3 Gm25669-201ENSMUST00000157699 112 ntBASIC4.5□□□□□ -1.69
Upf3aQ3ULJ3 Gm24675-201ENSMUST00000158757 259 ntBASIC4.5□□□□□ -1.69
Upf3aQ3ULJ3 Ppp1r2-ps9-201ENSMUST00000173100 549 ntBASIC4.5□□□□□ -1.69
Upf3aQ3ULJ3 Gm22857-201ENSMUST00000174969 134 ntBASIC4.5□□□□□ -1.69
Upf3aQ3ULJ3 Gm21244-201ENSMUST00000178447 684 ntAPPRIS P1 BASIC4.5□□□□□ -1.69
Upf3aQ3ULJ3 Gm5974-201ENSMUST00000181607 986 ntBASIC4.5□□□□□ -1.69
Upf3aQ3ULJ3 Mir6996-201ENSMUST00000183922 61 ntBASIC4.5□□□□□ -1.69
Upf3aQ3ULJ3 Faiml-202ENSMUST00000188555 560 ntAPPRIS P1 TSL 5 BASIC4.5□□□□□ -1.69
Upf3aQ3ULJ3 Pgk1-ps3-201ENSMUST00000198338 1201 ntBASIC4.5□□□□□ -1.69
Upf3aQ3ULJ3 Gm43276-201ENSMUST00000199712 364 ntBASIC4.5□□□□□ -1.69
Upf3aQ3ULJ3 Olfr747-202ENSMUST00000205373 1132 ntAPPRIS P1 TSL 5 BASIC4.5□□□□□ -1.69
Upf3aQ3ULJ3 Gm34272-201ENSMUST00000208886 253 ntBASIC4.5□□□□□ -1.69
Upf3aQ3ULJ3 Olfr178-203ENSMUST00000215032 2103 ntAPPRIS P1 TSL 5 BASIC4.5□□□□□ -1.69
Upf3aQ3ULJ3 AC131677.1-201ENSMUST00000218721 535 ntBASIC4.5□□□□□ -1.69
Upf3aQ3ULJ3 AC140344.1-201ENSMUST00000223384 387 ntBASIC4.5□□□□□ -1.69
Upf3aQ3ULJ3 AC154358.1-201ENSMUST00000224871 218 ntBASIC4.5□□□□□ -1.69
Upf3aQ3ULJ3 Klrc1-202ENSMUST00000032271 822 ntAPPRIS ALT2 TSL 1 (best) BASIC4.5□□□□□ -1.69
Upf3aQ3ULJ3 Defb4-201ENSMUST00000081017 454 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
Upf3aQ3ULJ3 Olfr1484-203ENSMUST00000215567 3699 ntAPPRIS P1 TSL 5 BASIC4.5□□□□□ -1.69
Upf3aQ3ULJ3 Vmn2r3-201ENSMUST00000170244 2670 ntAPPRIS P2 TSL 5 BASIC4.5□□□□□ -1.69
Upf3aQ3ULJ3 Olfr406-203ENSMUST00000217016 2651 ntAPPRIS P1 TSL 5 BASIC4.5□□□□□ -1.69
Upf3aQ3ULJ3 AI987944-202ENSMUST00000205338 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC4.5□□□□□ -1.69
Upf3aQ3ULJ3 B3galt1-201ENSMUST00000042456 2855 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
Upf3aQ3ULJ3 Ccr9-205ENSMUST00000180093 4239 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
Upf3aQ3ULJ3 Kctd12b-202ENSMUST00000112572 4851 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
Upf3aQ3ULJ3 Klhl15-204ENSMUST00000113915 6241 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
Upf3aQ3ULJ3 Gm37569-201ENSMUST00000192111 1722 ntBASIC4.49□□□□□ -1.69
Upf3aQ3ULJ3 5330437M03Rik-201ENSMUST00000201318 4083 ntBASIC4.49□□□□□ -1.69
Upf3aQ3ULJ3 D130004A15Rik-201ENSMUST00000201492 1577 ntBASIC4.49□□□□□ -1.69
Upf3aQ3ULJ3 Olfr220-202ENSMUST00000194229 3286 ntAPPRIS P1 TSL 3 BASIC4.49□□□□□ -1.69
Upf3aQ3ULJ3 Olfr782-202ENSMUST00000213970 1944 ntAPPRIS P1 TSL 5 BASIC4.49□□□□□ -1.69
Upf3aQ3ULJ3 Snord65-201ENSMUST00000104269 72 ntBASIC4.49□□□□□ -1.69
Upf3aQ3ULJ3 Gm23319-201ENSMUST00000104467 131 ntBASIC4.49□□□□□ -1.69
Upf3aQ3ULJ3 5033423K11Rik-201ENSMUST00000117311 787 ntBASIC4.49□□□□□ -1.69
Upf3aQ3ULJ3 Tmc4-ps-201ENSMUST00000117819 258 ntBASIC4.49□□□□□ -1.69
Upf3aQ3ULJ3 Gm11625-201ENSMUST00000119535 296 ntBASIC4.49□□□□□ -1.69
Upf3aQ3ULJ3 Gm23902-201ENSMUST00000157571 134 ntBASIC4.49□□□□□ -1.69
Upf3aQ3ULJ3 Ang-ps2-201ENSMUST00000178173 433 ntBASIC4.49□□□□□ -1.69
Upf3aQ3ULJ3 Gm29475-201ENSMUST00000190767 312 ntBASIC4.49□□□□□ -1.69
Upf3aQ3ULJ3 Gm6057-201ENSMUST00000195927 314 ntBASIC4.49□□□□□ -1.69
Upf3aQ3ULJ3 Gm5885-202ENSMUST00000203357 528 ntBASIC4.49□□□□□ -1.69
Upf3aQ3ULJ3 Clec2f-202ENSMUST00000204981 657 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
Upf3aQ3ULJ3 Gm36633-201ENSMUST00000205873 647 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
Upf3aQ3ULJ3 Olfr1486-ps1-201ENSMUST00000208835 220 ntBASIC4.49□□□□□ -1.69
Upf3aQ3ULJ3 Olfr724-202ENSMUST00000213390 1152 ntAPPRIS P1 TSL 5 BASIC4.49□□□□□ -1.69
Upf3aQ3ULJ3 AC153912.1-201ENSMUST00000217011 724 ntAPPRIS P1 TSL 3 BASIC4.49□□□□□ -1.69
Upf3aQ3ULJ3 AC153516.1-201ENSMUST00000217955 779 ntBASIC4.49□□□□□ -1.69
Upf3aQ3ULJ3 AC131117.1-201ENSMUST00000225154 1171 ntBASIC4.49□□□□□ -1.69
Upf3aQ3ULJ3 AC154270.1-201ENSMUST00000227226 426 ntBASIC4.49□□□□□ -1.69
Upf3aQ3ULJ3 Cd300ld2-201ENSMUST00000092463 381 ntTSL 5 BASIC4.49□□□□□ -1.69
Upf3aQ3ULJ3 Olfr1196-202ENSMUST00000216928 4270 ntAPPRIS P1 TSL 5 BASIC4.49□□□□□ -1.69
Upf3aQ3ULJ3 Lpar4-201ENSMUST00000060576 4238 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
Upf3aQ3ULJ3 Gm45854-201ENSMUST00000211857 3488 ntBASIC4.49□□□□□ -1.69
Upf3aQ3ULJ3 Vmn1r72-203ENSMUST00000227010 6279 ntAPPRIS P1 BASIC4.48□□□□□ -1.69
Retrieved 100 of 76,532 protein–RNA pairs in 65 ms