Protein–RNA interactions for Protein: Q3UDK1

Trafd1, TRAF-type zinc finger domain-containing protein 1, mousemouse

Predictions only

Length 580 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trafd1Q3UDK1 Gm3669-205ENSMUST00000144018 1118 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
Trafd1Q3UDK1 Gm22156-201ENSMUST00000158409 141 ntBASIC4.27□□□□□ -1.73
Trafd1Q3UDK1 Vmn1r166-201ENSMUST00000164045 921 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
Trafd1Q3UDK1 Gm8453-201ENSMUST00000167253 921 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
Trafd1Q3UDK1 Gm4498-201ENSMUST00000168580 921 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
Trafd1Q3UDK1 Vmn1r118-201ENSMUST00000172322 921 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
Trafd1Q3UDK1 Vmn1r139-202ENSMUST00000173668 753 ntTSL 3 BASIC4.27□□□□□ -1.73
Trafd1Q3UDK1 Obox4-ps9-201ENSMUST00000176927 1136 ntBASIC4.27□□□□□ -1.73
Trafd1Q3UDK1 Gm8693-201ENSMUST00000178871 921 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
Trafd1Q3UDK1 Vmn1r138-201ENSMUST00000179206 921 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
Trafd1Q3UDK1 Vmn1r131-201ENSMUST00000179390 921 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
Trafd1Q3UDK1 Vmn1r111-201ENSMUST00000179511 921 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
Trafd1Q3UDK1 Mir3473f-201ENSMUST00000183743 136 ntBASIC4.27□□□□□ -1.73
Trafd1Q3UDK1 Gm27940-201ENSMUST00000184449 98 ntBASIC4.27□□□□□ -1.73
Trafd1Q3UDK1 Mir6975-201ENSMUST00000184879 61 ntBASIC4.27□□□□□ -1.73
Trafd1Q3UDK1 1700003C15Rik-201ENSMUST00000185360 1224 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
Trafd1Q3UDK1 Gm42564-201ENSMUST00000196013 582 ntTSL 5 BASIC4.27□□□□□ -1.73
Trafd1Q3UDK1 Gm42830-201ENSMUST00000196642 313 ntBASIC4.27□□□□□ -1.73
Trafd1Q3UDK1 Gm18867-201ENSMUST00000198022 1179 ntBASIC4.27□□□□□ -1.73
Trafd1Q3UDK1 Gm18747-201ENSMUST00000198129 648 ntBASIC4.27□□□□□ -1.73
Trafd1Q3UDK1 Gm18660-201ENSMUST00000199542 629 ntBASIC4.27□□□□□ -1.73
Trafd1Q3UDK1 Gm44003-201ENSMUST00000203024 490 ntBASIC4.27□□□□□ -1.73
Trafd1Q3UDK1 Gm17737-201ENSMUST00000210183 1147 ntBASIC4.27□□□□□ -1.73
Trafd1Q3UDK1 Olfr673-ps1-201ENSMUST00000210859 411 ntBASIC4.27□□□□□ -1.73
Trafd1Q3UDK1 Gm18891-201ENSMUST00000216734 1087 ntBASIC4.27□□□□□ -1.73
Trafd1Q3UDK1 CT025552.2-201ENSMUST00000225497 317 ntBASIC4.27□□□□□ -1.73
Trafd1Q3UDK1 Il6-201ENSMUST00000026845 1141 ntAPPRIS P2 TSL 1 (best) BASIC4.27□□□□□ -1.73
Trafd1Q3UDK1 Olfr1109-201ENSMUST00000099863 939 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
Trafd1Q3UDK1 Gtf3c3-201ENSMUST00000041638 4582 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
Trafd1Q3UDK1 Zfp984-202ENSMUST00000122309 2405 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
Trafd1Q3UDK1 Slc22a28-201ENSMUST00000065651 2004 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
Trafd1Q3UDK1 Olfr1316-202ENSMUST00000213696 4184 ntAPPRIS ALT1 TSL 5 BASIC4.27□□□□□ -1.73
Trafd1Q3UDK1 Tug1-202ENSMUST00000144852 4720 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
Trafd1Q3UDK1 Zfp850-203ENSMUST00000180502 6163 ntAPPRIS P1 TSL 3 BASIC4.27□□□□□ -1.73
Trafd1Q3UDK1 Gpm6a-201ENSMUST00000033915 3215 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
Trafd1Q3UDK1 Olfr1317-204ENSMUST00000216988 2488 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
Trafd1Q3UDK1 Gm16892-201ENSMUST00000180999 1726 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
Trafd1Q3UDK1 Gm37569-201ENSMUST00000192111 1722 ntBASIC4.26□□□□□ -1.73
Trafd1Q3UDK1 Gm28940-201ENSMUST00000187929 1682 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
Trafd1Q3UDK1 Gm21778-202ENSMUST00000185926 1482 ntAPPRIS P1 TSL 5 BASIC4.26□□□□□ -1.73
Trafd1Q3UDK1 Dnah6-203ENSMUST00000114040 12513 ntAPPRIS ALT2 TSL 5 BASIC4.26□□□□□ -1.73
Trafd1Q3UDK1 CAAA01194877.1-201ENSMUST00000213137 4233 ntBASIC4.26□□□□□ -1.73
Trafd1Q3UDK1 Olfr1037-202ENSMUST00000213333 1610 ntAPPRIS P1 TSL 5 BASIC4.26□□□□□ -1.73
Trafd1Q3UDK1 Vmn2r30-202ENSMUST00000174368 3688 ntTSL 2 BASIC4.26□□□□□ -1.73
Trafd1Q3UDK1 Olfr1258-203ENSMUST00000213720 7098 ntAPPRIS P1 TSL 5 BASIC4.26□□□□□ -1.73
Trafd1Q3UDK1 Igkv1-132-201ENSMUST00000103305 362 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
Trafd1Q3UDK1 Trav15-1-dv6-1-201ENSMUST00000103653 349 ntAPPRIS ALT2 BASIC4.26□□□□□ -1.73
Trafd1Q3UDK1 Gm23322-201ENSMUST00000104464 167 ntBASIC4.26□□□□□ -1.73
Trafd1Q3UDK1 Gm14385-201ENSMUST00000116315 876 ntBASIC4.26□□□□□ -1.73
Trafd1Q3UDK1 Gm14586-201ENSMUST00000119571 408 ntBASIC4.26□□□□□ -1.73
Trafd1Q3UDK1 Gm14655-201ENSMUST00000120124 578 ntBASIC4.26□□□□□ -1.73
Trafd1Q3UDK1 Clec2f-201ENSMUST00000121051 374 ntBASIC4.26□□□□□ -1.73
Trafd1Q3UDK1 Rpl12-ps2-201ENSMUST00000121298 321 ntBASIC4.26□□□□□ -1.73
Trafd1Q3UDK1 Gm13366-201ENSMUST00000122198 970 ntBASIC4.26□□□□□ -1.73
Trafd1Q3UDK1 1700080G11Rik-201ENSMUST00000156401 436 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
Trafd1Q3UDK1 Gm15226-201ENSMUST00000156526 2971 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
Trafd1Q3UDK1 Gm22789-201ENSMUST00000157884 130 ntBASIC4.26□□□□□ -1.73
Trafd1Q3UDK1 Gm3077-201ENSMUST00000165903 627 ntBASIC4.26□□□□□ -1.73
Trafd1Q3UDK1 Gm23638-201ENSMUST00000175073 126 ntBASIC4.26□□□□□ -1.73
Trafd1Q3UDK1 Gm23158-201ENSMUST00000175076 126 ntBASIC4.26□□□□□ -1.73
Trafd1Q3UDK1 Gm22907-201ENSMUST00000175198 126 ntBASIC4.26□□□□□ -1.73
Trafd1Q3UDK1 Gm22625-201ENSMUST00000175382 126 ntBASIC4.26□□□□□ -1.73
Trafd1Q3UDK1 Gm22875-201ENSMUST00000175449 126 ntBASIC4.26□□□□□ -1.73
Trafd1Q3UDK1 Gm25197-201ENSMUST00000175516 126 ntBASIC4.26□□□□□ -1.73
Trafd1Q3UDK1 Rab26os-202ENSMUST00000176921 298 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
Trafd1Q3UDK1 Gm27857-201ENSMUST00000176930 126 ntBASIC4.26□□□□□ -1.73
Trafd1Q3UDK1 Vmn1r-ps19-201ENSMUST00000177008 926 ntBASIC4.26□□□□□ -1.73
Trafd1Q3UDK1 Gm26268-201ENSMUST00000177685 126 ntBASIC4.26□□□□□ -1.73
Trafd1Q3UDK1 Gm23681-201ENSMUST00000178821 126 ntBASIC4.26□□□□□ -1.73
Trafd1Q3UDK1 Gm28615-201ENSMUST00000187527 482 ntBASIC4.26□□□□□ -1.73
Trafd1Q3UDK1 Gm38108-201ENSMUST00000193891 399 ntTSL 5 BASIC4.26□□□□□ -1.73
Trafd1Q3UDK1 Gm37720-201ENSMUST00000195497 1241 ntBASIC4.26□□□□□ -1.73
Trafd1Q3UDK1 Gm17954-201ENSMUST00000195893 607 ntBASIC4.26□□□□□ -1.73
Trafd1Q3UDK1 Gm43491-201ENSMUST00000197133 784 ntBASIC4.26□□□□□ -1.73
Trafd1Q3UDK1 Gm43449-201ENSMUST00000202955 371 ntTSL 3 BASIC4.26□□□□□ -1.73
Trafd1Q3UDK1 Gm8703-201ENSMUST00000203793 730 ntBASIC4.26□□□□□ -1.73
Trafd1Q3UDK1 Gm44946-201ENSMUST00000208425 572 ntBASIC4.26□□□□□ -1.73
Trafd1Q3UDK1 Irf2-209ENSMUST00000210218 535 ntTSL 3 BASIC4.26□□□□□ -1.73
Trafd1Q3UDK1 Gm6657-204ENSMUST00000211288 1091 ntAPPRIS P5 TSL 5 BASIC4.26□□□□□ -1.73
Trafd1Q3UDK1 Gm39302-201ENSMUST00000215184 636 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
Trafd1Q3UDK1 AC154828.2-201ENSMUST00000220908 1070 ntBASIC4.26□□□□□ -1.73
Trafd1Q3UDK1 AC132324.1-201ENSMUST00000221855 584 ntTSL 5 BASIC4.26□□□□□ -1.73
Trafd1Q3UDK1 AC102435.1-201ENSMUST00000222199 908 ntTSL 5 BASIC4.26□□□□□ -1.73
Trafd1Q3UDK1 U90926-201ENSMUST00000031356 520 ntAPPRIS ALT2 TSL 5 BASIC4.26□□□□□ -1.73
Trafd1Q3UDK1 Vmn1r202-201ENSMUST00000078642 909 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
Trafd1Q3UDK1 Mir28a-201ENSMUST00000083560 86 ntBASIC4.26□□□□□ -1.73
Trafd1Q3UDK1 AC153964.1-201ENSMUST00000219677 3142 ntBASIC4.26□□□□□ -1.73
Trafd1Q3UDK1 Olfr183-205ENSMUST00000214916 2249 ntAPPRIS P1 TSL 5 BASIC4.25□□□□□ -1.73
Trafd1Q3UDK1 Vmn1r43-203ENSMUST00000226741 12542 ntAPPRIS P1 BASIC4.25□□□□□ -1.73
Trafd1Q3UDK1 Trbv20-201ENSMUST00000103277 335 ntAPPRIS P1 BASIC4.25□□□□□ -1.73
Trafd1Q3UDK1 Ceacam13-202ENSMUST00000108488 1005 ntAPPRIS ALT2 TSL 1 (best) BASIC4.25□□□□□ -1.73
Trafd1Q3UDK1 Fbxl17-204ENSMUST00000112840 3667 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
Trafd1Q3UDK1 Gm11432-201ENSMUST00000117334 231 ntBASIC4.25□□□□□ -1.73
Trafd1Q3UDK1 Ube2v2-204ENSMUST00000118236 893 ntTSL 5 BASIC4.25□□□□□ -1.73
Trafd1Q3UDK1 Gm5754-201ENSMUST00000118774 892 ntBASIC4.25□□□□□ -1.73
Trafd1Q3UDK1 Sult2a-ps2-201ENSMUST00000121135 405 ntBASIC4.25□□□□□ -1.73
Trafd1Q3UDK1 Gm15517-201ENSMUST00000124863 251 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
Trafd1Q3UDK1 Olfr59-201ENSMUST00000143976 3088 ntAPPRIS P1 TSL 3 BASIC4.25□□□□□ -1.73
Trafd1Q3UDK1 Gm14618-201ENSMUST00000149377 740 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
Trafd1Q3UDK1 Gm3091-201ENSMUST00000163408 484 ntBASIC4.25□□□□□ -1.73
Retrieved 100 of 76,532 protein–RNA pairs in 77 ms